RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	DPH3P1	Q9H4G8	78 aa		5.66	□□□□□ -1.5
TSC2-223	ENST00000568566	SMIM17	P0DL12	118 aa		5.65	□□□□□ -1.5
TSC2-223	ENST00000568566	BTF3	P20290	206 aa	Known RBP	5.65	□□□□□ -1.5
TSC2-223	ENST00000568566	SMIM15	Q7Z3B0	74 aa		5.65	□□□□□ -1.5
TSC2-223	ENST00000568566	FRZB	Q92765	325 aa		5.65	□□□□□ -1.5
TSC2-223	ENST00000568566	CIDEA	O60543	219 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	IGHV3-30	P01768	117 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	IGHV3-33	P01772	117 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	TRGC1	P0CF51	173 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	IGHV3-30-3	P0DP02	117 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	IGHV3-30-5	P0DP03	117 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	XG	P55808	180 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	MRPL51	Q4U2R6	128 aa	Known RBP	5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	LCE2D	Q5TA82	110 aa	Predicted RBP	5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	TMEM191A	Q9H0A3	160 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	GTSF1L	Q9H1H1	148 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	TRAPPC1	Q9Y5R8	145 aa		5.64	□□□□□ -1.51
TSC2-223	ENST00000568566	TRBV7-3	A0A075B6L6	115 aa		5.63	□□□□□ -1.51
TSC2-223	ENST00000568566	S100A6	P06703	90 aa		5.63	□□□□□ -1.51
TSC2-223	ENST00000568566	FAM104B	Q5XKR9	115 aa		5.63	□□□□□ -1.51
TSC2-223	ENST00000568566	NRAC	Q8N912	160 aa		5.63	□□□□□ -1.51
TSC2-223	ENST00000568566	UPK3B	Q9BT76	320 aa		5.63	□□□□□ -1.51
TSC2-223	ENST00000568566	HMCN2	Q8NDA2	5059 aa		5.63	□□□□□ -1.51
TSC2-223	ENST00000568566	TRBV10-1	A0A0K0K1A3	114 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	SIVA1	O15304	175 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	APCS	P02743	223 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	PPBP	P02775	128 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	SMR3B	P02814	79 aa	Predicted RBP	5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	TRGC2	P03986	189 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	KRTAP10-1	P60331	282 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	RPL36A	P83881	106 aa	Known RBP	5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	OR10J3	Q5JRS4	329 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	LELP1	Q5T871	98 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	TMEM136	Q6ZRR5	245 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	DAZ4	Q86SG3	579 aa	Known RBP	5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	RPL36AL	Q969Q0	106 aa	Known RBP	5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	MRPL18	Q9H0U6	180 aa	Known RBP	5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	NIT2	Q9NQR4	276 aa		5.62	□□□□□ -1.51
TSC2-223	ENST00000568566	DAZ3	Q9NR90	486 aa	Known RBP	5.62	□□□□□ -1.51
TSC2-223	ENST00000568566		J3QL48	77 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	NPY	P01303	97 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	TIRAP	P58753	221 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	HAMP	P81172	84 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	FABP9	Q0Z7S8	132 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	GAGE6	Q13070	117 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	KIAA1644	Q3SXP7	199 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	CDPF1	Q6NVV7	123 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566		Q6ZRN7	208 aa	Predicted RBP	5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	PGPEP1	Q9NXJ5	209 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	LAMTOR2	Q9Y2Q5	125 aa		5.61	□□□□□ -1.51
TSC2-223	ENST00000568566	TRBV6-8	A0A0A6YYG3	113 aa		5.6	□□□□□ -1.51
TSC2-223	ENST00000568566		D6R8Y8	96 aa		5.6	□□□□□ -1.51
TSC2-223	ENST00000568566	EREG	O14944	169 aa		5.6	□□□□□ -1.51
TSC2-223	ENST00000568566	PPP1R17	O96001	155 aa		5.6	□□□□□ -1.51
TSC2-223	ENST00000568566	DNAH10OS	P0CZ25	163 aa		5.6	□□□□□ -1.51
TSC2-223	ENST00000568566	NIT1	Q86X76	327 aa		5.6	□□□□□ -1.51
TSC2-223	ENST00000568566	SDHAF1	A6NFY7	115 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	PHOX2A	O14813	284 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BK	O60814	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	TSHB	P01222	138 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BJ	P06899	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BO	P23527	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BB	P33778	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	POLR2K	P53803	58 aa	Known RBP	5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BD	P58876	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BC	P62807	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566		Q0VG73	95 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST2H2BE	Q16778	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	COA6	Q5JTJ3	125 aa	Known RBP	5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.59	□□□□□ -1.51
TSC2-223	ENST00000568566		Q8N976	141 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BH	Q93079	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BN	Q99877	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	HIST1H2BM	Q99879	126 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	TMEM70	Q9BUB7	260 aa		5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	TMA7	Q9Y2S6	64 aa	Known RBP	5.59	□□□□□ -1.51
TSC2-223	ENST00000568566	IGLV4-60	A0A075B6I1	120 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	TRBV6-5	A0A0K0K1A5	114 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	TNFRSF6B	O95407	300 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	MPV17L2	Q567V2	206 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	SH2D6	Q7Z4S9	175 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	ORMDL3	Q8N138	153 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	MRAP2	Q96G30	205 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	CHCHD5	Q9BSY4	110 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	CHCHD7	Q9BUK0	85 aa		5.58	□□□□□ -1.52
TSC2-223	ENST00000568566	TRAV8-6	A0A0B4J262	113 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	FAM229A	H3BQW9	127 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566		H7C1H1	209 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	CKS2	P33552	79 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	RBX1	P62877	108 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	LINC01556	Q5JQF7	62 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	CLPSL2	Q6UWE3	100 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	KRTAP3-3	Q9BYR6	98 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	KRTAP3-2	Q9BYR7	98 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566		Q9HAA7	133 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	ST20	Q9HBF5	79 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566	KLK12	Q9UKR0	248 aa		5.57	□□□□□ -1.52
TSC2-223	ENST00000568566		A0A087WTM6	91 aa		5.56	□□□□□ -1.52

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