RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 M0QXV9 152 aa8.16□□□□□ -1.1
PALB2-206ENST00000568219 GPHB5Q86YW7 130 aa8.16□□□□□ -1.1
PALB2-206ENST00000568219 HIVEP3Q5T1R4 2406 aa8.16□□□□□ -1.1
PALB2-206ENST00000568219 A0A1B0GX51 115 aa8.16□□□□□ -1.1
PALB2-206ENST00000568219 LINC00694P0DN24 101 aa8.16□□□□□ -1.1
PALB2-206ENST00000568219 PPDPFQ9H3Y8 114 aa8.16□□□□□ -1.1
PALB2-206ENST00000568219 COX6B1P14854 86 aa8.16□□□□□ -1.1
PALB2-206ENST00000568219 POLR2KP53803 58 aaKnown RBP8.16□□□□□ -1.1
PALB2-206ENST00000568219 ATP5J2P56134 94 aa8.16□□□□□ -1.1
PALB2-206ENST00000568219 IGLV4-3A0A075B6K6 122 aa8.15□□□□□ -1.1
PALB2-206ENST00000568219 LOC107984640A0A0U1RRK4 108 aa8.15□□□□□ -1.1
PALB2-206ENST00000568219 TRACP01848 142 aa8.15□□□□□ -1.1
PALB2-206ENST00000568219 DAZ2Q13117 558 aaKnown RBP8.15□□□□□ -1.1
PALB2-206ENST00000568219 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.1
PALB2-206ENST00000568219 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
PALB2-206ENST00000568219 USMG5Q96IX5 58 aa8.15□□□□□ -1.1
PALB2-206ENST00000568219 TMEM126AQ9H061 195 aa8.15□□□□□ -1.1
PALB2-206ENST00000568219 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
PALB2-206ENST00000568219 SPANXA1Q9NS26 97 aa8.15□□□□□ -1.1
PALB2-206ENST00000568219 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
PALB2-206ENST00000568219 HERVK_113P63121 156 aa8.15□□□□□ -1.11
PALB2-206ENST00000568219 COX8CQ7Z4L0 72 aa8.15□□□□□ -1.11
PALB2-206ENST00000568219 XCL2Q9UBD3 114 aa8.15□□□□□ -1.11
PALB2-206ENST00000568219 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 ADAMTSL4-AS1Q5T5F5 129 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 LRBAP50851 2863 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 IGHV4-4A0A075B6R2 117 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 hADV29S1A0JD25 119 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 TRBV30A0A0K0K1B3 111 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 EDN2P20800 178 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 CFHR3Q02985 330 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 ODF3Q96PU9 254 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 PSMG3-AS1Q96PY0 264 aa8.14□□□□□ -1.11
PALB2-206ENST00000568219 TRGV2A0A075B6R0 118 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 INAFM2P0DMQ5 153 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 C5orf56Q8N8D9 126 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 DMDP11532 3685 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 M0QY20 66 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 NHLRC4P0CG21 123 aaPredicted RBP8.13□□□□□ -1.11
PALB2-206ENST00000568219 ODF3BA8MYP8 253 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 ATP5G1P05496 136 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 MIAQ16674 131 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 POM121L12Q8N7R1 296 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 ABCA12Q86UK0 2595 aa8.13□□□□□ -1.11
PALB2-206ENST00000568219 NSUN5P1Q3KNT7 163 aa8.12□□□□□ -1.11
PALB2-206ENST00000568219 PEMTQ9UBM1 199 aa8.12□□□□□ -1.11
PALB2-206ENST00000568219 PRB1P04280 392 aa8.12□□□□□ -1.11
PALB2-206ENST00000568219 MUC3AQ02505 3323 aa8.12□□□□□ -1.11
PALB2-206ENST00000568219 TRBV27A0A0K0K1C4 114 aa8.12□□□□□ -1.11
PALB2-206ENST00000568219 MAPK1IP1LQ8NDC0 245 aa8.12□□□□□ -1.11
PALB2-206ENST00000568219 PIK3CD-AS1Q5SR53 167 aa8.12□□□□□ -1.11
PALB2-206ENST00000568219 C14orf132Q9NPU4 83 aa8.12□□□□□ -1.11
PALB2-206ENST00000568219 A0A1W2PRX2 142 aa8.11□□□□□ -1.11
PALB2-206ENST00000568219 LINC00643Q86TS7 51 aa8.11□□□□□ -1.11
PALB2-206ENST00000568219 IGHV1-69P01742 117 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 IGHV4-38-2P0DP08 117 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 FAM110AQ9BQ89 295 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 ZFYVE26Q68DK2 2539 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 ZZEF1O43149 2961 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 IGHV4OR15-8A0A075B7B6 117 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 A0A087WW49 117 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 LINC01546A6NGU7 62 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 J3KT08 172 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 ACYP1P07311 99 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 DEFB136Q30KP8 78 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 PIMREGQ9BSJ6 248 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 RPL36AP83881 106 aaKnown RBP8.1□□□□□ -1.11
PALB2-206ENST00000568219 ZNF415Q09FC8 603 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 TMEM61Q8N0U2 210 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 Q8NA96 180 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 RPL36ALQ969Q0 106 aaKnown RBP8.1□□□□□ -1.11
PALB2-206ENST00000568219 MTORP42345 2549 aa8.1□□□□□ -1.11
PALB2-206ENST00000568219 RBMY1BA6NDE4 496 aaKnown RBP8.09□□□□□ -1.11
PALB2-206ENST00000568219 RBMY1EA6NEQ0 496 aaKnown RBP8.09□□□□□ -1.11
PALB2-206ENST00000568219 LST1O00453 97 aa8.09□□□□□ -1.11
PALB2-206ENST00000568219 NDUFA7O95182 113 aa8.09□□□□□ -1.11
PALB2-206ENST00000568219 RBMY1DP0C7P1 496 aaKnown RBP8.09□□□□□ -1.11
PALB2-206ENST00000568219 RBMY1A1P0DJD3 496 aaKnown RBP8.09□□□□□ -1.11
PALB2-206ENST00000568219 RBMY1CP0DJD4 496 aa8.09□□□□□ -1.11
PALB2-206ENST00000568219 C3orf22Q8N5N4 141 aa8.09□□□□□ -1.11
PALB2-206ENST00000568219 VSIG2Q96IQ7 327 aa8.09□□□□□ -1.11
PALB2-206ENST00000568219 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
PALB2-206ENST00000568219 DMXL1Q9Y485 3027 aa8.09□□□□□ -1.11
PALB2-206ENST00000568219 SOCS3O14543 225 aa8.09□□□□□ -1.11
PALB2-206ENST00000568219 UQCRQO14949 82 aa8.08□□□□□ -1.12
PALB2-206ENST00000568219 LY6DQ14210 128 aa8.08□□□□□ -1.12
PALB2-206ENST00000568219 PIP4P1Q86T03 277 aa8.08□□□□□ -1.12
PALB2-206ENST00000568219 APRG1Q8IVJ8 170 aa8.08□□□□□ -1.12
PALB2-206ENST00000568219 SIRPDQ9H106 197 aa8.08□□□□□ -1.12
PALB2-206ENST00000568219 SLPIP03973 132 aa8.08□□□□□ -1.12
PALB2-206ENST00000568219 MED14OSP0DP75 135 aa8.08□□□□□ -1.12
PALB2-206ENST00000568219 LINC00467Q9BRT7 94 aa8.08□□□□□ -1.12
PALB2-206ENST00000568219 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
PALB2-206ENST00000568219 LECT2O14960 151 aa8.07□□□□□ -1.12
PALB2-206ENST00000568219 Q8N6K4 173 aa8.07□□□□□ -1.12
PALB2-206ENST00000568219 C10orf99Q6UWK7 81 aa8.07□□□□□ -1.12
PALB2-206ENST00000568219 ZNF575Q86XF7 245 aa8.07□□□□□ -1.12
PALB2-206ENST00000568219 VPREB3Q9UKI3 123 aa8.07□□□□□ -1.12
PALB2-206ENST00000568219 U3KQE9 123 aa8.07□□□□□ -1.12
PALB2-206ENST00000568219 C5orf38Q86SI9 138 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms