RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ICOSQ9Y6W8 199 aa5.37□□□□□ -1.55
SMG1-214ENST00000568038 TRBV10-1A0A0K0K1A3 114 aa5.36□□□□□ -1.55
SMG1-214ENST00000568038 H3BNG1 76 aa5.36□□□□□ -1.55
SMG1-214ENST00000568038 MT-ND6P03923 174 aa5.36□□□□□ -1.55
SMG1-214ENST00000568038 SRIP30626 198 aa5.36□□□□□ -1.55
SMG1-214ENST00000568038 MRPL23Q16540 153 aaKnown RBP5.36□□□□□ -1.55
SMG1-214ENST00000568038 OR10J3Q5JRS4 329 aa5.36□□□□□ -1.55
SMG1-214ENST00000568038 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.36□□□□□ -1.55
SMG1-214ENST00000568038 C15orf53Q8NAA6 179 aa5.36□□□□□ -1.55
SMG1-214ENST00000568038 PRSS3P2Q8NHM4 247 aa5.36□□□□□ -1.55
SMG1-214ENST00000568038 NIT2Q9NQR4 276 aa5.36□□□□□ -1.55
SMG1-214ENST00000568038 TRBV7-3A0A075B6L6 115 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 IGHV3-38A0A0C4DH36 116 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 C3orf84H3BNL1 204 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 NPYP01303 97 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 PPBPP02775 128 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 RAB5AP20339 215 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 CASC10Q5T4H9 136 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 NEGR1Q7Z3B1 354 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 ORMDL3Q8N138 153 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 NRACQ8N912 160 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 ATP6V0E2Q8NHE4 81 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 DEFB104AQ8WTQ1 72 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 DNAJC30Q96LL9 226 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 PRELID3AQ96N28 172 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 ST20Q9HBF5 79 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 APLNQ9ULZ1 77 aa5.35□□□□□ -1.55
SMG1-214ENST00000568038 PPP1R17O96001 155 aa5.34□□□□□ -1.55
SMG1-214ENST00000568038 TRGC2P03986 189 aa5.34□□□□□ -1.55
SMG1-214ENST00000568038 UBE2D3P61077 147 aa5.34□□□□□ -1.55
SMG1-214ENST00000568038 UBE2D2P62837 147 aa5.34□□□□□ -1.55
SMG1-214ENST00000568038 TRBV6-5A0A0K0K1A5 114 aa5.33□□□□□ -1.56
SMG1-214ENST00000568038 LOC389332A0A1B0GUA5 103 aa5.33□□□□□ -1.56
SMG1-214ENST00000568038 SDHAF1A6NFY7 115 aa5.33□□□□□ -1.56
SMG1-214ENST00000568038 LINC00694P0DN24 101 aa5.33□□□□□ -1.56
SMG1-214ENST00000568038 PMCHP20382 165 aa5.33□□□□□ -1.56
SMG1-214ENST00000568038 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
SMG1-214ENST00000568038 SH2D6Q7Z4S9 175 aa5.33□□□□□ -1.56
SMG1-214ENST00000568038 ALKBH7Q9BT30 221 aaPredicted RBP5.33□□□□□ -1.56
SMG1-214ENST00000568038 PHOX2AO14813 284 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 POLR2KP53803 58 aaKnown RBP5.32□□□□□ -1.56
SMG1-214ENST00000568038 CCL18P55774 89 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 TCTAP57738 103 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 ESRGQ1W209 222 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 LYPD5Q6UWN5 251 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 DAZ4Q86SG3 579 aaKnown RBP5.32□□□□□ -1.56
SMG1-214ENST00000568038 C20orf78Q9BR46 151 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 TMEM70Q9BUB7 260 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 GTSF1LQ9H1H1 148 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 MAP1LC3AQ9H492 121 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 DAZ3Q9NR90 486 aaKnown RBP5.32□□□□□ -1.56
SMG1-214ENST00000568038 LAMTOR2Q9Y2Q5 125 aa5.32□□□□□ -1.56
SMG1-214ENST00000568038 COL7A1Q02388 2944 aa5.31□□□□□ -1.56
SMG1-214ENST00000568038 I3L3M4 83 aa5.31□□□□□ -1.56
SMG1-214ENST00000568038 VCYO14598 125 aa5.31□□□□□ -1.56
SMG1-214ENST00000568038 COTL1Q14019 142 aa5.31□□□□□ -1.56
SMG1-214ENST00000568038 IQCJQ1A5X6 159 aa5.31□□□□□ -1.56
SMG1-214ENST00000568038 UBE2DNLQ8IWF7 75 aa5.31□□□□□ -1.56
SMG1-214ENST00000568038 SMIM2Q9BVW6 85 aa5.31□□□□□ -1.56
SMG1-214ENST00000568038 LINC00588Q9Y4M8 146 aa5.31□□□□□ -1.56
SMG1-214ENST00000568038 TRBV6-8A0A0A6YYG3 113 aa5.3□□□□□ -1.56
SMG1-214ENST00000568038 TRBV27A0A0K0K1C4 114 aa5.3□□□□□ -1.56
SMG1-214ENST00000568038 TCAPO15273 167 aa5.3□□□□□ -1.56
SMG1-214ENST00000568038 TSHBP01222 138 aa5.3□□□□□ -1.56
SMG1-214ENST00000568038 FCER1GP30273 86 aa5.3□□□□□ -1.56
SMG1-214ENST00000568038 IFI27P40305 119 aaPredicted RBP5.3□□□□□ -1.56
SMG1-214ENST00000568038 NTM-AS1Q6ZSK4 140 aa5.3□□□□□ -1.56
SMG1-214ENST00000568038 KIR2DL4Q99706 377 aa5.3□□□□□ -1.56
SMG1-214ENST00000568038 STAB2Q8WWQ8 2551 aa5.3□□□□□ -1.56
SMG1-214ENST00000568038 IGLV2-18A0A075B6J9 118 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 TRAV8-6A0A0B4J262 113 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 IGHV1-24A0A0C4DH33 117 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 PRSS47A8MTI9 375 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 AMTP48728 403 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 TIRAPP58753 221 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 RPL32P62910 135 aaKnown RBP5.29□□□□□ -1.56
SMG1-214ENST00000568038 TMEM97Q5BJF2 176 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 LELP1Q5T871 98 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 Q8N8P6 123 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 C18orf32Q8TCD1 76 aa5.29□□□□□ -1.56
SMG1-214ENST00000568038 NXT2Q9NPJ8 142 aaKnown RBP5.29□□□□□ -1.56
SMG1-214ENST00000568038 MRPS16Q9Y3D3 137 aaKnown RBP5.29□□□□□ -1.56
SMG1-214ENST00000568038 TRBV25-1A0A075B6N4 114 aa5.28□□□□□ -1.56
SMG1-214ENST00000568038 C1orf196B1AJZ1 125 aa5.28□□□□□ -1.56
SMG1-214ENST00000568038 LY6G6CO95867 125 aa5.28□□□□□ -1.56
SMG1-214ENST00000568038 FA2HQ7L5A8 372 aa5.28□□□□□ -1.56
SMG1-214ENST00000568038 WFDC10BQ8IUB3 73 aa5.28□□□□□ -1.56
SMG1-214ENST00000568038 CHCHD5Q9BSY4 110 aa5.28□□□□□ -1.56
SMG1-214ENST00000568038 TMEM243Q9BU79 118 aa5.28□□□□□ -1.56
SMG1-214ENST00000568038 CHCHD7Q9BUK0 85 aa5.28□□□□□ -1.56
SMG1-214ENST00000568038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.27□□□□□ -1.57
SMG1-214ENST00000568038 IGKV2-29A2NJV5 120 aaPredicted RBP5.27□□□□□ -1.57
SMG1-214ENST00000568038 TMEM262E9PQX1 116 aa5.27□□□□□ -1.57
SMG1-214ENST00000568038 UBE2L6O14933 153 aa5.27□□□□□ -1.57
SMG1-214ENST00000568038 IGHV3-30P01768 117 aa5.27□□□□□ -1.57
SMG1-214ENST00000568038 IGHV3-33P01772 117 aa5.27□□□□□ -1.57
SMG1-214ENST00000568038 IGHV3-30-3P0DP02 117 aa5.27□□□□□ -1.57
SMG1-214ENST00000568038 IGHV3-30-5P0DP03 117 aa5.27□□□□□ -1.57
SMG1-214ENST00000568038 GAGE6Q13070 117 aa5.27□□□□□ -1.57
SMG1-214ENST00000568038 LGALS9CQ6DKI2 356 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms