RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 KLK12Q9UKR0 248 aa8.56□□□□□ -1.04
GINS3-209ENST00000567909 DNAH11Q96DT5 4516 aa8.55□□□□□ -1.04
GINS3-209ENST00000567909 A0A1B0GXF2 115 aa8.55□□□□□ -1.04
GINS3-209ENST00000567909 RPS10P46783 165 aaKnown RBP8.55□□□□□ -1.04
GINS3-209ENST00000567909 AMTP48728 403 aa8.55□□□□□ -1.04
GINS3-209ENST00000567909 MRPL51Q4U2R6 128 aaKnown RBP8.55□□□□□ -1.04
GINS3-209ENST00000567909 MPV17L2Q567V2 206 aa8.55□□□□□ -1.04
GINS3-209ENST00000567909 TMEM243Q9BU79 118 aa8.55□□□□□ -1.04
GINS3-209ENST00000567909 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
GINS3-209ENST00000567909 PSCAO43653 123 aa8.54□□□□□ -1.04
GINS3-209ENST00000567909 PKIAP61925 76 aa8.54□□□□□ -1.04
GINS3-209ENST00000567909 LAGE3Q14657 143 aa8.54□□□□□ -1.04
GINS3-209ENST00000567909 ELOBQ15370 118 aa8.54□□□□□ -1.04
GINS3-209ENST00000567909 ATRAIDQ6UW56 229 aa8.54□□□□□ -1.04
GINS3-209ENST00000567909 ATP5L2Q7Z4Y8 100 aa8.54□□□□□ -1.04
GINS3-209ENST00000567909 TRAV8-3A0A0A6YYJ7 113 aa8.53□□□□□ -1.04
GINS3-209ENST00000567909 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
GINS3-209ENST00000567909 ANGP03950 147 aaKnown RBP8.53□□□□□ -1.04
GINS3-209ENST00000567909 PMCHP20382 165 aa8.53□□□□□ -1.04
GINS3-209ENST00000567909 CKS2P33552 79 aa8.53□□□□□ -1.04
GINS3-209ENST00000567909 Q8N976 141 aa8.53□□□□□ -1.04
GINS3-209ENST00000567909 UBE2WQ96B02 151 aa8.53□□□□□ -1.04
GINS3-209ENST00000567909 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
GINS3-209ENST00000567909 TRAV9-1A0A075B6T8 112 aa8.52□□□□□ -1.05
GINS3-209ENST00000567909 I3L3M4 83 aa8.52□□□□□ -1.05
GINS3-209ENST00000567909 UBE2L6O14933 153 aa8.52□□□□□ -1.05
GINS3-209ENST00000567909 APCSP02743 223 aa8.52□□□□□ -1.05
GINS3-209ENST00000567909 RBX1P62877 108 aa8.52□□□□□ -1.05
GINS3-209ENST00000567909 NRACQ8N912 160 aa8.52□□□□□ -1.05
GINS3-209ENST00000567909 TMEM70Q9BUB7 260 aa8.52□□□□□ -1.05
GINS3-209ENST00000567909 BIRC6Q9NR09 4857 aa8.51□□□□□ -1.05
GINS3-209ENST00000567909 D6R8Y8 96 aa8.51□□□□□ -1.05
GINS3-209ENST00000567909 PPP1R17O96001 155 aa8.51□□□□□ -1.05
GINS3-209ENST00000567909 CRPP02741 224 aa8.51□□□□□ -1.05
GINS3-209ENST00000567909 TM2D2Q9BX73 214 aa8.51□□□□□ -1.05
GINS3-209ENST00000567909 IGKV2D-24A0A075B6R9 120 aa8.5□□□□□ -1.05
GINS3-209ENST00000567909 EREGO14944 169 aa8.5□□□□□ -1.05
GINS3-209ENST00000567909 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
GINS3-209ENST00000567909 SUMO2P61956 95 aaKnown RBP8.5□□□□□ -1.05
GINS3-209ENST00000567909 COX19Q49B96 90 aa8.5□□□□□ -1.05
GINS3-209ENST00000567909 CLPSL2Q6UWE3 100 aa8.5□□□□□ -1.05
GINS3-209ENST00000567909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.49□□□□□ -1.05
GINS3-209ENST00000567909 A0A087WTM6 91 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 TRBV27A0A0K0K1C4 114 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 IGKV2-29A2NJV5 120 aaPredicted RBP8.49□□□□□ -1.05
GINS3-209ENST00000567909 VCYO14598 125 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 TNFRSF6BO95407 300 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 TSHBP01222 138 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 Q0VG73 95 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 ENHOQ6UWT2 76 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 SPATA12Q7Z6I5 190 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 RMI2Q96E14 147 aa8.49□□□□□ -1.05
GINS3-209ENST00000567909 DYNC1H1Q14204 4646 aaKnown RBP8.49□□□□□ -1.05
GINS3-209ENST00000567909 IGLV4-60A0A075B6I1 120 aa8.48□□□□□ -1.05
GINS3-209ENST00000567909 NPYP01303 97 aa8.48□□□□□ -1.05
GINS3-209ENST00000567909 PPBPP02775 128 aa8.48□□□□□ -1.05
GINS3-209ENST00000567909 FCER1GP30273 86 aa8.48□□□□□ -1.05
GINS3-209ENST00000567909 AMMECR1LQ6DCA0 310 aa8.48□□□□□ -1.05
GINS3-209ENST00000567909 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
GINS3-209ENST00000567909 ORMDL3Q8N138 153 aa8.48□□□□□ -1.05
GINS3-209ENST00000567909 A0A1B0GUV1 79 aa8.47□□□□□ -1.05
GINS3-209ENST00000567909 FUSP35637 526 aaKnown RBP eCLIP8.47□□□□□ -1.05
GINS3-209ENST00000567909 KRTAP10-2P60368 255 aa8.47□□□□□ -1.05
GINS3-209ENST00000567909 RNASEKQ6P5S7 137 aaKnown RBP8.47□□□□□ -1.05
GINS3-209ENST00000567909 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
GINS3-209ENST00000567909 PRELID3AQ96N28 172 aa8.47□□□□□ -1.05
GINS3-209ENST00000567909 KIR2DL4Q99706 377 aa8.47□□□□□ -1.05
GINS3-209ENST00000567909 C20orf78Q9BR46 151 aa8.47□□□□□ -1.05
GINS3-209ENST00000567909 C1orf43Q9BWL3 253 aa8.47□□□□□ -1.05
GINS3-209ENST00000567909 COX11Q9Y6N1 276 aa8.47□□□□□ -1.05
GINS3-209ENST00000567909 TRBV24-1A0A075B6N3 115 aa8.46□□□□□ -1.06
GINS3-209ENST00000567909 C16orf90A8MZG2 172 aa8.46□□□□□ -1.06
GINS3-209ENST00000567909 FGF6P10767 208 aa8.46□□□□□ -1.06
GINS3-209ENST00000567909 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 H7C423 109 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 LECT2O14960 151 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 ESDP10768 282 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 REG3AQ06141 175 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 MIAQ16674 131 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 BAALCQ8WXS3 180 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 SMIM2Q9BVW6 85 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 PRR34Q9NV39 138 aa8.45□□□□□ -1.06
GINS3-209ENST00000567909 IGLV10-54A0A075B6I4 117 aa8.44□□□□□ -1.06
GINS3-209ENST00000567909 PHOX2AO14813 284 aa8.44□□□□□ -1.06
GINS3-209ENST00000567909 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
GINS3-209ENST00000567909 WFDC2Q14508 124 aa8.44□□□□□ -1.06
GINS3-209ENST00000567909 MAPKAPK5-AS1Q8N8E1 139 aa8.44□□□□□ -1.06
GINS3-209ENST00000567909 LOC389332A0A1B0GUA5 103 aa8.43□□□□□ -1.06
GINS3-209ENST00000567909 HLA-DQA1P01909 254 aa8.43□□□□□ -1.06
GINS3-209ENST00000567909 CBLN2Q8IUK8 224 aa8.43□□□□□ -1.06
GINS3-209ENST00000567909 TMEM101Q96IK0 257 aa8.43□□□□□ -1.06
GINS3-209ENST00000567909 TCAPO15273 167 aa8.42□□□□□ -1.06
GINS3-209ENST00000567909 MT-ND6P03923 174 aa8.42□□□□□ -1.06
GINS3-209ENST00000567909 ZNF25P17030 456 aaPredicted RBP8.42□□□□□ -1.06
GINS3-209ENST00000567909 KIAA1644Q3SXP7 199 aa8.42□□□□□ -1.06
GINS3-209ENST00000567909 Q8N814 137 aa8.42□□□□□ -1.06
GINS3-209ENST00000567909 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
GINS3-209ENST00000567909 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms