RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 IGKV3OR2-268A0A0C4DH90 116 aa7.91□□□□□ -1.14
GTF3C1-208ENST00000567843 CTRLP40313 264 aa7.91□□□□□ -1.14
GTF3C1-208ENST00000567843 AKAP14Q86UN6 197 aa7.91□□□□□ -1.14
GTF3C1-208ENST00000567843 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
GTF3C1-208ENST00000567843 AMTP48728 403 aa7.9□□□□□ -1.14
GTF3C1-208ENST00000567843 GATD1Q8NB37 220 aa7.9□□□□□ -1.14
GTF3C1-208ENST00000567843 GTSF1Q8WW33 167 aa7.9□□□□□ -1.14
GTF3C1-208ENST00000567843 RPL39LQ96EH5 51 aaKnown RBP7.9□□□□□ -1.14
GTF3C1-208ENST00000567843 UBE2L6O14933 153 aa7.89□□□□□ -1.15
GTF3C1-208ENST00000567843 GATCO43716 136 aaKnown RBP7.89□□□□□ -1.15
GTF3C1-208ENST00000567843 COTL1Q14019 142 aa7.89□□□□□ -1.15
GTF3C1-208ENST00000567843 PGLYRP4Q96LB8 373 aa7.89□□□□□ -1.15
GTF3C1-208ENST00000567843 PANO1I0J062 215 aa7.88□□□□□ -1.15
GTF3C1-208ENST00000567843 TAGLN2P37802 199 aaKnown RBP7.88□□□□□ -1.15
GTF3C1-208ENST00000567843 KRTAP10-4P60372 401 aaPredicted RBP7.88□□□□□ -1.15
GTF3C1-208ENST00000567843 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
GTF3C1-208ENST00000567843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
GTF3C1-208ENST00000567843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.87□□□□□ -1.15
GTF3C1-208ENST00000567843 hDV102S1A0JD36 115 aa7.87□□□□□ -1.15
GTF3C1-208ENST00000567843 IGKV2-29A2NJV5 120 aaPredicted RBP7.87□□□□□ -1.15
GTF3C1-208ENST00000567843 BLOC1S1P78537 153 aa7.87□□□□□ -1.15
GTF3C1-208ENST00000567843 C9orf163Q8N9P6 203 aa7.87□□□□□ -1.15
GTF3C1-208ENST00000567843 CNFNQ9BYD5 112 aa7.87□□□□□ -1.15
GTF3C1-208ENST00000567843 A0A1B0GUV1 79 aa7.86□□□□□ -1.15
GTF3C1-208ENST00000567843 GAGE12HA6NDE8 117 aa7.86□□□□□ -1.15
GTF3C1-208ENST00000567843 GAS8-AS1O95177 125 aa7.86□□□□□ -1.15
GTF3C1-208ENST00000567843 DGAT2L7PQ6IED9 249 aa7.86□□□□□ -1.15
GTF3C1-208ENST00000567843 SMIM15Q7Z3B0 74 aa7.86□□□□□ -1.15
GTF3C1-208ENST00000567843 TRAV8-4A0A0B4J246 113 aa7.85□□□□□ -1.15
GTF3C1-208ENST00000567843 TMEM250H0YL14 139 aa7.85□□□□□ -1.15
GTF3C1-208ENST00000567843 SLPIP03973 132 aa7.85□□□□□ -1.15
GTF3C1-208ENST00000567843 AMMECR1LQ6DCA0 310 aa7.85□□□□□ -1.15
GTF3C1-208ENST00000567843 RNASEKQ6P5S7 137 aaKnown RBP7.85□□□□□ -1.15
GTF3C1-208ENST00000567843 SDIM1Q6ZPB5 146 aa7.85□□□□□ -1.15
GTF3C1-208ENST00000567843 EIF5A2Q9GZV4 153 aaKnown RBP7.85□□□□□ -1.15
GTF3C1-208ENST00000567843 PKHD1L1Q86WI1 4243 aa7.85□□□□□ -1.15
GTF3C1-208ENST00000567843 SDHAF1A6NFY7 115 aa7.84□□□□□ -1.15
GTF3C1-208ENST00000567843 KRTAP29-1A8MX34 341 aaPredicted RBP7.84□□□□□ -1.15
GTF3C1-208ENST00000567843 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
GTF3C1-208ENST00000567843 RPL37AP61513 92 aaKnown RBP7.84□□□□□ -1.15
GTF3C1-208ENST00000567843 CLRN3Q8NCR9 226 aa7.84□□□□□ -1.15
GTF3C1-208ENST00000567843 DPH3Q96FX2 82 aa7.84□□□□□ -1.15
GTF3C1-208ENST00000567843 SMIM7Q9BQ49 75 aa7.84□□□□□ -1.15
GTF3C1-208ENST00000567843 A8MWL6 223 aa7.83□□□□□ -1.16
GTF3C1-208ENST00000567843 APCSP02743 223 aa7.83□□□□□ -1.16
GTF3C1-208ENST00000567843 HNRNPA3P51991 378 aaKnown RBP7.83□□□□□ -1.16
GTF3C1-208ENST00000567843 HIGD2BQ4VC39 106 aa7.83□□□□□ -1.16
GTF3C1-208ENST00000567843 FAM231DQ6ZW35 169 aa7.83□□□□□ -1.16
GTF3C1-208ENST00000567843 LYPD6BQ8NI32 183 aa7.83□□□□□ -1.16
GTF3C1-208ENST00000567843 AP5S1Q9NUS5 200 aa7.83□□□□□ -1.16
GTF3C1-208ENST00000567843 FGF6P10767 208 aa7.82□□□□□ -1.16
GTF3C1-208ENST00000567843 PMCHP20382 165 aa7.82□□□□□ -1.16
GTF3C1-208ENST00000567843 TMEM242Q9NWH2 141 aa7.82□□□□□ -1.16
GTF3C1-208ENST00000567843 HMCN2Q8NDA2 5059 aa7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 A0A1B0GVG6 124 aa7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 FAM231BA6NCW3 169 aa7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 ZNF727A8MUV8 499 aa7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 SRP19P09132 144 aaKnown RBP7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 CNBPP62633 177 aaKnown RBP7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 LINC01551Q86U37 167 aa7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 C15orf56Q8N910 161 aa7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 BORCS7Q96B45 105 aa7.81□□□□□ -1.16
GTF3C1-208ENST00000567843 IGHV3-64A0A075B6Q5 118 aa7.8□□□□□ -1.16
GTF3C1-208ENST00000567843 HIGD1CA8MV81 97 aa7.8□□□□□ -1.16
GTF3C1-208ENST00000567843 SMKR1H3BMG3 65 aa7.8□□□□□ -1.16
GTF3C1-208ENST00000567843 I3L3M4 83 aa7.8□□□□□ -1.16
GTF3C1-208ENST00000567843 NCR2O95944 276 aa7.8□□□□□ -1.16
GTF3C1-208ENST00000567843 FAM210AQ96ND0 272 aa7.8□□□□□ -1.16
GTF3C1-208ENST00000567843 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 A0A1B0GUT8 65 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 TSHBP01222 138 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 RPS10P46783 165 aaKnown RBP7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 XCL1P47992 114 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 CT83Q5H943 113 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 TEX261Q6UWH6 196 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 AMN1Q8IY45 258 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 TSKUQ8WUA8 353 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 RNF185Q96GF1 192 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 ST20Q9HBF5 79 aa7.79□□□□□ -1.16
GTF3C1-208ENST00000567843 A0A087WYN8 130 aa7.78□□□□□ -1.16
GTF3C1-208ENST00000567843 TRBV6-5A0A0K0K1A5 114 aa7.78□□□□□ -1.16
GTF3C1-208ENST00000567843 RAB4AP20338 218 aa7.78□□□□□ -1.16
GTF3C1-208ENST00000567843 COX6A2Q02221 97 aa7.78□□□□□ -1.16
GTF3C1-208ENST00000567843 LINC00526Q96FQ7 95 aa7.78□□□□□ -1.16
GTF3C1-208ENST00000567843 BTF3L4Q96K17 158 aa7.78□□□□□ -1.16
GTF3C1-208ENST00000567843 OSTCQ9NRP0 149 aa7.78□□□□□ -1.16
GTF3C1-208ENST00000567843 IGKV2-24A0A0C4DH68 120 aa7.77□□□□□ -1.17
GTF3C1-208ENST00000567843 CFAP161Q6P656 301 aa7.77□□□□□ -1.17
GTF3C1-208ENST00000567843 PRSS3P2Q8NHM4 247 aa7.77□□□□□ -1.17
GTF3C1-208ENST00000567843 TMEM101Q96IK0 257 aa7.77□□□□□ -1.17
GTF3C1-208ENST00000567843 TMEM191AQ9H0A3 160 aa7.77□□□□□ -1.17
GTF3C1-208ENST00000567843 V9GYV3 84 aa7.77□□□□□ -1.17
GTF3C1-208ENST00000567843 C9JQL5 133 aa7.76□□□□□ -1.17
GTF3C1-208ENST00000567843 H7C423 109 aa7.76□□□□□ -1.17
GTF3C1-208ENST00000567843 CCL25O15444 150 aa7.76□□□□□ -1.17
GTF3C1-208ENST00000567843 ESDP10768 282 aa7.76□□□□□ -1.17
GTF3C1-208ENST00000567843 FOXI1Q12951 378 aa7.76□□□□□ -1.17
GTF3C1-208ENST00000567843 CIRBPQ14011 172 aaKnown RBP7.76□□□□□ -1.17
GTF3C1-208ENST00000567843 NUP35Q8NFH5 326 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 223.5 ms