RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 A0A0J9YX75 114 aa9.35□□□□□ -0.91
CSPG4P13-202ENST00000567704 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
CSPG4P13-202ENST00000567704 NOTCH2Q04721 2471 aa9.35□□□□□ -0.91
CSPG4P13-202ENST00000567704 K7EMT4 169 aa9.34□□□□□ -0.91
CSPG4P13-202ENST00000567704 A8MZ25 164 aa9.34□□□□□ -0.91
CSPG4P13-202ENST00000567704 C22orf34Q6ZV56 151 aa9.34□□□□□ -0.91
CSPG4P13-202ENST00000567704 C20orf173Q96LM9 149 aa9.34□□□□□ -0.91
CSPG4P13-202ENST00000567704 MYO9AB2RTY4 2548 aa9.34□□□□□ -0.91
CSPG4P13-202ENST00000567704 NREPQ16612 68 aa9.34□□□□□ -0.91
CSPG4P13-202ENST00000567704 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
CSPG4P13-202ENST00000567704 ZFAND2AQ8N6M9 145 aa9.34□□□□□ -0.91
CSPG4P13-202ENST00000567704 EML5Q05BV3 1969 aa9.33□□□□□ -0.92
CSPG4P13-202ENST00000567704 IGHV4-61A0A0C4DH41 118 aa9.33□□□□□ -0.92
CSPG4P13-202ENST00000567704 TMEM256-PLSCR3K7ERE1 68 aa9.33□□□□□ -0.92
CSPG4P13-202ENST00000567704 NCR3O14931 201 aa9.33□□□□□ -0.92
CSPG4P13-202ENST00000567704 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
CSPG4P13-202ENST00000567704 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
CSPG4P13-202ENST00000567704 IGHV4OR15-8A0A075B7B6 117 aa9.32□□□□□ -0.92
CSPG4P13-202ENST00000567704 A0A087WW49 117 aa9.32□□□□□ -0.92
CSPG4P13-202ENST00000567704 SLPIP03973 132 aa9.32□□□□□ -0.92
CSPG4P13-202ENST00000567704 PIK3CD-AS1Q5SR53 167 aa9.32□□□□□ -0.92
CSPG4P13-202ENST00000567704 GYPEP15421 78 aa9.32□□□□□ -0.92
CSPG4P13-202ENST00000567704 A0A096LNJ9 63 aa9.32□□□□□ -0.92
CSPG4P13-202ENST00000567704 FAM236DA0A1B0GTK5 79 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 FAM236CP0DP71 79 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 GPHB5Q86YW7 130 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 LINC00467Q9BRT7 94 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 ZFAND3Q9H8U3 227 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 IMUPQ9GZP8 106 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 PKIGQ9Y2B9 76 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 LST1O00453 97 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 PIEZO2Q9H5I5 2752 aa9.31□□□□□ -0.92
CSPG4P13-202ENST00000567704 M0QXV9 152 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 M0QY20 66 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 VPREB3Q9UKI3 123 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 H7C423 109 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 LINC00694P0DN24 101 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 ENHOQ6UWT2 76 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 WFDC9Q8NEX5 89 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 C10orf105Q8TEF2 133 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 CRIP2P52943 208 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 TMEM263Q8WUH6 116 aaKnown RBP9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 SIRPDQ9H106 197 aa9.3□□□□□ -0.92
CSPG4P13-202ENST00000567704 TRBV27A0A0K0K1C4 114 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 COX7CP15954 63 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 OTOGLQ3ZCN5 2332 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 CENPFP49454 3210 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 A0A0U1RQV1 116 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 ZMAT4Q9H898 229 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 UBE2D1P51668 147 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 PRR9Q5T870 116 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 MPLKIPQ8TAP9 179 aa9.29□□□□□ -0.92
CSPG4P13-202ENST00000567704 AGRNO00468 2067 aa9.28□□□□□ -0.92
CSPG4P13-202ENST00000567704 MUC6Q6W4X9 2439 aa9.28□□□□□ -0.92
CSPG4P13-202ENST00000567704 SERP2Q8N6R1 65 aa9.28□□□□□ -0.92
CSPG4P13-202ENST00000567704 ODF3BA8MYP8 253 aa9.28□□□□□ -0.92
CSPG4P13-202ENST00000567704 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
CSPG4P13-202ENST00000567704 ESM1Q9NQ30 184 aa9.28□□□□□ -0.92
CSPG4P13-202ENST00000567704 Q6Q795 121 aa9.28□□□□□ -0.92
CSPG4P13-202ENST00000567704 CNFNQ9BYD5 112 aa9.28□□□□□ -0.92
CSPG4P13-202ENST00000567704 CUL9Q8IWT3 2517 aa9.27□□□□□ -0.92
CSPG4P13-202ENST00000567704 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
CSPG4P13-202ENST00000567704 PSCAO43653 123 aa9.27□□□□□ -0.93
CSPG4P13-202ENST00000567704 RPL18AQ02543 176 aaKnown RBP9.27□□□□□ -0.93
CSPG4P13-202ENST00000567704 PROK1P58294 105 aa9.27□□□□□ -0.93
CSPG4P13-202ENST00000567704 C16orf74Q96GX8 76 aa9.27□□□□□ -0.93
CSPG4P13-202ENST00000567704 J3QLI3 93 aa9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 POLR2KP53803 58 aaKnown RBP9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 CAMK2N2Q96S95 79 aa9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 CCL24O00175 119 aa9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 NDUFA1O15239 70 aa9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 TIRAPP58753 221 aa9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 IGHV4-30-2A0A087WSY4 118 aa9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 UBE2D3P61077 147 aa9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 UBE2D2P62837 147 aa9.26□□□□□ -0.93
CSPG4P13-202ENST00000567704 LY6LH3BQJ8 138 aa9.25□□□□□ -0.93
CSPG4P13-202ENST00000567704 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
CSPG4P13-202ENST00000567704 TRBV10-1A0A0K0K1A3 114 aa9.25□□□□□ -0.93
CSPG4P13-202ENST00000567704 TRBV6-5A0A0K0K1A5 114 aa9.25□□□□□ -0.93
CSPG4P13-202ENST00000567704 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
CSPG4P13-202ENST00000567704 TSHBP01222 138 aa9.24□□□□□ -0.93
CSPG4P13-202ENST00000567704 DIRC1Q969H9 104 aa9.24□□□□□ -0.93
CSPG4P13-202ENST00000567704 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
CSPG4P13-202ENST00000567704 MP68P56378 58 aa9.23□□□□□ -0.93
CSPG4P13-202ENST00000567704 UBE2BP63146 152 aa9.23□□□□□ -0.93
CSPG4P13-202ENST00000567704 Q96MF0 132 aa9.23□□□□□ -0.93
CSPG4P13-202ENST00000567704 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
CSPG4P13-202ENST00000567704 PDE6GP18545 87 aa9.23□□□□□ -0.93
CSPG4P13-202ENST00000567704 SPAG11BQ08648 103 aa9.23□□□□□ -0.93
CSPG4P13-202ENST00000567704 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
CSPG4P13-202ENST00000567704 LRRC75A-AS1Q8N1F1 130 aa9.23□□□□□ -0.93
CSPG4P13-202ENST00000567704 Q6ZTI0 123 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 CDIP1Q9H305 208 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 MUC22E2RYF6 1773 aaPredicted RBP9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 K7EQG2 157 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 UBE2DNLQ8IWF7 75 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 POM121L12Q8N7R1 296 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 FAM110AQ9BQ89 295 aa9.22□□□□□ -0.93
CSPG4P13-202ENST00000567704 PYGO1Q9Y3Y4 419 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms