RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 C20orf78Q9BR46 151 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 SPXQ9BT56 116 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 ST20Q9HBF5 79 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 NOP10Q9NPE3 64 aaKnown RBP4.07□□□□□ -1.76
SF3B3-210ENST00000567654 TP73-AS1Q9UF72 201 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 PAM16Q9Y3D7 125 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 GOLT1BQ9Y3E0 138 aa4.07□□□□□ -1.76
SF3B3-210ENST00000567654 hDV102S1A0JD36 115 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 SDHAF1A6NFY7 115 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 A8MWV9 139 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 TSHBP01222 138 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 ZC2HC1BQ5TFG8 222 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 LINC01545Q5VT33 79 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 C12orf54Q6X4T0 127 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 ZFP2Q6ZN57 461 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 NEXN-AS1Q8NBZ9 246 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 IFI27L1Q96BM0 104 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 C16orf74Q96GX8 76 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 MAP1LC3CQ9BXW4 147 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 EDA2RQ9HAV5 297 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 HSPB8Q9UJY1 196 aa4.06□□□□□ -1.76
SF3B3-210ENST00000567654 NBEAL2Q6ZNJ1 2754 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 TRBV27A0A0K0K1C4 114 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 G3V4G9 280 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 GAGE7O76087 117 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 GAGE12FP0CL80 117 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 GAGE12GP0CL81 117 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 GAGE12IP0CL82 117 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 IGHV4-30-4P0DP06 118 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 PKIAP61925 76 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 RPL39P62891 51 aaKnown RBP4.05□□□□□ -1.76
SF3B3-210ENST00000567654 RPL32P62910 135 aaKnown RBP4.05□□□□□ -1.76
SF3B3-210ENST00000567654 DAZ2Q13117 558 aaKnown RBP4.05□□□□□ -1.76
SF3B3-210ENST00000567654 RRN3P1Q2M238 152 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 DEFB135Q30KP9 77 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 SPATA45Q537H7 98 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 PET117Q6UWS5 81 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 OVOL2Q9BRP0 275 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 VAMP8Q9BV40 100 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 C1QTNF4Q9BXJ3 329 aa4.05□□□□□ -1.76
SF3B3-210ENST00000567654 DYNC2H1Q8NCM8 4307 aaKnown RBP4.04□□□□□ -1.76
SF3B3-210ENST00000567654 DNHD1Q96M86 4753 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 TRAV4A0A0B4J268 109 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 IGHV3-38A0A0C4DH36 116 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 IGLV5-39A0A0G2JS06 123 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 LOC100131303A0A0U1RQF7 123 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 DEFB4AO15263 64 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 EMP1P54849 157 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 S100A12P80511 92 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 EGFEM1PQ0D2K5 195 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 LGALS9BQ3B8N2 356 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 ORMDL2Q53FV1 153 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 LGALS9CQ6DKI2 356 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 C2orf66Q6UXQ4 117 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 OR4C5Q8NGB2 326 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 PHLDA1Q8WV24 401 aaPredicted RBP4.04□□□□□ -1.76
SF3B3-210ENST00000567654 TOMM6Q96B49 74 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 RETNQ9HD89 108 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 TP53TG1Q9Y2A0 90 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 DNAH1Q9P2D7 4330 aa4.04□□□□□ -1.76
SF3B3-210ENST00000567654 COL6A5A8TX70 2615 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 TRAV9-2A0A087WT02 112 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 VCYO14598 125 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 PPP1R17O96001 155 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 DDTP30046 118 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 TCTAP57738 103 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 LINC00612Q8N6U2 182 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 SLC25A29Q8N8R3 303 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 Q8NAQ8 132 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 KIR2DL5BQ8NHK3 375 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 BAALCQ8WXS3 180 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 FAM104AQ969W3 186 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 OPRPNQ99935 248 aaPredicted RBP4.03□□□□□ -1.76
SF3B3-210ENST00000567654 CELA1Q9UNI1 258 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 TENM3Q9P273 2699 aa4.03□□□□□ -1.76
SF3B3-210ENST00000567654 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 C20orf202A1L168 122 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 IGIPA6NJ69 53 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 TSTD3H0UI37 97 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 I3L3M4 83 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 K7EMI3 77 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 K7EQD1 137 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 PRB2P02812 416 aaPredicted RBP4.02□□□□□ -1.77
SF3B3-210ENST00000567654 IGLC3P0DOY3 106 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 APOC4P55056 127 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 KRTAP21-3Q3LHN1 58 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 OR11H2Q8NH07 326 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 ZNRF2Q8NHG8 242 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 MPLKIPQ8TAP9 179 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 C14orf144Q96I85 54 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 SCGB3A1Q96QR1 104 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 NDUFAF3Q9BU61 184 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 CHCHD7Q9BUK0 85 aa4.02□□□□□ -1.77
SF3B3-210ENST00000567654 MRPL35Q9NZE8 188 aaKnown RBP4.02□□□□□ -1.77
SF3B3-210ENST00000567654 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.01□□□□□ -1.77
SF3B3-210ENST00000567654 A0A087WX48 190 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 IGKV2D-26A0A0A0MRZ7 120 aa4.01□□□□□ -1.77
SF3B3-210ENST00000567654 IGKV2-29A2NJV5 120 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms