RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	PKD1	P98161	4303 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	GAGE12J	A6NER3	117 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	IBA57-AS1	B1ANH7	110 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635		K7ERU9	68 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635		M0R381	172 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	IGHV3-30	P01768	117 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	IGHV3-33	P01772	117 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	IGHV3-30-3	P0DP02	117 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	IGHV3-30-5	P0DP03	117 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	GAGE4	Q13068	117 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	GAGE5	Q13069	117 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	BATF	Q16520	125 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	GAGE13	Q4V321	117 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	TEX43	Q6ZNM6	134 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	C14orf178	Q8N769	122 aa	Predicted RBP	4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	OCC1	Q8TAD7	63 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	ANAPC16	Q96DE5	110 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	SFRP2	Q96HF1	295 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635	MLST8	Q9BVC4	326 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635		Q9UF83	564 aa		4.66	□□□□□ -1.66
SF3B3-209	ENST00000567635		A0A087WTM6	91 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635		A0A087WWL8	130 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635	CCL25	O15444	150 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635	PSCA	O43653	123 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635	ADIRF	Q15847	76 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635	FAM74A4	Q5TZK3	123 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635	DERL1	Q9BUN8	251 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635	UQCR10	Q9UDW1	63 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635	FAT2	Q9NYQ8	4349 aa		4.65	□□□□□ -1.67
SF3B3-209	ENST00000567635	KIAA1109	Q2LD37	5005 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	TRBV20OR9-2	A0A075B6H5	130 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	FAM229A	H3BQW9	127 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	EIF4EBP3	O60516	100 aa	Predicted RBP	4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	LINC00694	P0DN24	101 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	SCGB1A1	P11684	91 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	FUS	P35637	526 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	GNG4	P50150	75 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	HNRNPA3	P51991	378 aa	Known RBP	4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	KCNIP4	Q6PIL6	250 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	MAPKAPK5-AS1	Q8N8E1	139 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	OR10G8	Q8NGN5	311 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	KRTAP4-5	Q9BYR2	181 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635		Q9HAA7	133 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	COX11	Q9Y6N1	276 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	DNAH2	Q9P225	4427 aa		4.64	□□□□□ -1.67
SF3B3-209	ENST00000567635	TRBV10-1	A0A0K0K1A3	114 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	LRCOL1	A6NCL2	159 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	IGLV2-8	P01709	118 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	OR5AL1	P0C617	328 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	RPL36A	P83881	106 aa	Known RBP	4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	LAGE3	Q14657	143 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	OCIAD2	Q56VL3	154 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	SPANXN1	Q5VSR9	72 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	PRR27	Q6MZM9	219 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635		Q8N1X5	172 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	OR10AG1	Q8NH19	301 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	RPL36AL	Q969Q0	106 aa	Known RBP	4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	DAZAP1	Q96EP5	407 aa	Known RBP	4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	TM2D2	Q9BX73	214 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	OSTC	Q9NRP0	149 aa		4.63	□□□□□ -1.67
SF3B3-209	ENST00000567635	TRBV7-3	A0A075B6L6	115 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	TRAV8-3	A0A0A6YYJ7	113 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	MUC21	A0A0G2JKD1	596 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	MUC21	A0A140T8X8	626 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635		F5H697	171 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635		K7EN84	100 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	SNAI2	O43623	268 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	GCSH	P23434	173 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	CENPW	Q5EE01	88 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	DAZ4	Q86SG3	579 aa	Known RBP	4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	MRPL18	Q9H0U6	180 aa	Known RBP	4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	CST9L	Q9H4G1	147 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	DAZ3	Q9NR90	486 aa	Known RBP	4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635	LAMTOR2	Q9Y2Q5	125 aa		4.62	□□□□□ -1.67
SF3B3-209	ENST00000567635		A0A1B0GV72	72 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	ESD	P10768	282 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	KRTAP10-1	P60331	282 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	UBE2D3	P61077	147 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	UBE2D2	P62837	147 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	ODF1	Q14990	250 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	VAMP3	Q15836	100 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	ZNF56	Q15929	161 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	FAM231D	Q6ZW35	169 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	NIT1	Q86X76	327 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635		Q8N3U1	123 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	NTN5	Q8WTR8	489 aa	Predicted RBP	4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635	PAM16	Q9Y3D7	125 aa		4.61	□□□□□ -1.67
SF3B3-209	ENST00000567635		A0A087WX48	190 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	IGLV5-52	A0A0A0MRZ9	124 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	C19orf71	A6NCJ1	209 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635		F2Z2F3	143 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	SMIM17	P0DL12	118 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	XG	P55808	180 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635		Q6ZN92	141 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	STPG4	Q8N801	248 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635		Q8N814	137 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	FER1L6-AS1	Q8NA97	138 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	NEXN-AS1	Q8NBZ9	246 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	RMI2	Q96E14	147 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms