RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 KRTAP10-4P60372 401 aaPredicted RBP4.88□□□□□ -1.63
GINS3-207ENST00000567400 BLOC1S1P78537 153 aa4.88□□□□□ -1.63
GINS3-207ENST00000567400 MIAQ16674 131 aa4.88□□□□□ -1.63
GINS3-207ENST00000567400 TMEM97Q5BJF2 176 aa4.88□□□□□ -1.63
GINS3-207ENST00000567400 C4orf48Q5BLP8 95 aa4.88□□□□□ -1.63
GINS3-207ENST00000567400 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.88□□□□□ -1.63
GINS3-207ENST00000567400 PGLYRP4Q96LB8 373 aa4.88□□□□□ -1.63
GINS3-207ENST00000567400 NIT2Q9NQR4 276 aa4.88□□□□□ -1.63
GINS3-207ENST00000567400 IGLV10-54A0A075B6I4 117 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 FAM229AH3BQW9 127 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 GAS8-AS1O95177 125 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 PKIAP61925 76 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 REG3AQ06141 175 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 TWIST1Q15672 202 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 FAM231DQ6ZW35 169 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 LINC01551Q86U37 167 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 LINC00528Q8N1L1 170 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 RPL39LQ96EH5 51 aaKnown RBP4.87□□□□□ -1.63
GINS3-207ENST00000567400 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 CHAC1Q9BUX1 264 aa4.87□□□□□ -1.63
GINS3-207ENST00000567400 A0A1B0GUV1 79 aa4.86□□□□□ -1.63
GINS3-207ENST00000567400 PANO1I0J062 215 aa4.86□□□□□ -1.63
GINS3-207ENST00000567400 CEBPGP53567 150 aa4.86□□□□□ -1.63
GINS3-207ENST00000567400 CT83Q5H943 113 aa4.86□□□□□ -1.63
GINS3-207ENST00000567400 CIRBP-AS1Q8TBR5 109 aa4.86□□□□□ -1.63
GINS3-207ENST00000567400 FAM210AQ96ND0 272 aa4.86□□□□□ -1.63
GINS3-207ENST00000567400 SMIM7Q9BQ49 75 aa4.86□□□□□ -1.63
GINS3-207ENST00000567400 C9JQL5 133 aa4.85□□□□□ -1.63
GINS3-207ENST00000567400 GATCO43716 136 aaKnown RBP4.85□□□□□ -1.63
GINS3-207ENST00000567400 NDUFS6O75380 124 aaKnown RBP4.85□□□□□ -1.63
GINS3-207ENST00000567400 SRP19P09132 144 aaKnown RBP4.85□□□□□ -1.63
GINS3-207ENST00000567400 AMTP48728 403 aa4.85□□□□□ -1.63
GINS3-207ENST00000567400 COTL1Q14019 142 aa4.85□□□□□ -1.63
GINS3-207ENST00000567400 C14orf177Q52M58 125 aa4.85□□□□□ -1.63
GINS3-207ENST00000567400 FAM231BA6NCW3 169 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 SDHAF1A6NFY7 115 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 HIGD1CA8MV81 97 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 A8MWL6 223 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 SLPIP03973 132 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 RPS10P46783 165 aaKnown RBP4.84□□□□□ -1.63
GINS3-207ENST00000567400 C9orf163Q8N9P6 203 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 TSKUQ8WUA8 353 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 RNF185Q96GF1 192 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 EIF5A2Q9GZV4 153 aaKnown RBP4.84□□□□□ -1.63
GINS3-207ENST00000567400 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.84□□□□□ -1.63
GINS3-207ENST00000567400 V9GYV3 84 aa4.84□□□□□ -1.63
GINS3-207ENST00000567400 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.64
GINS3-207ENST00000567400 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.83□□□□□ -1.64
GINS3-207ENST00000567400 TRAV8-4A0A0B4J246 113 aa4.83□□□□□ -1.64
GINS3-207ENST00000567400 TRBV6-5A0A0K0K1A5 114 aa4.83□□□□□ -1.64
GINS3-207ENST00000567400 IGKV2-29A2NJV5 120 aaPredicted RBP4.83□□□□□ -1.64
GINS3-207ENST00000567400 ZNF727A8MUV8 499 aa4.83□□□□□ -1.64
GINS3-207ENST00000567400 SRSF3P84103 164 aaKnown RBP4.83□□□□□ -1.64
GINS3-207ENST00000567400 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
GINS3-207ENST00000567400 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
GINS3-207ENST00000567400 C15orf56Q8N910 161 aa4.83□□□□□ -1.64
GINS3-207ENST00000567400 OSTCQ9NRP0 149 aa4.83□□□□□ -1.64
GINS3-207ENST00000567400 A0A1B0GUT8 65 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 hDV102S1A0JD36 115 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 UBE2L6O14933 153 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 NCR2O95944 276 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 TSHBP01222 138 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 PLA2G1BP04054 148 aaKnown RBP4.82□□□□□ -1.64
GINS3-207ENST00000567400 CNBPP62633 177 aaKnown RBP4.82□□□□□ -1.64
GINS3-207ENST00000567400 TEX261Q6UWH6 196 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 AMN1Q8IY45 258 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 ISOC2Q96AB3 205 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 TMEM191AQ9H0A3 160 aa4.82□□□□□ -1.64
GINS3-207ENST00000567400 APCSP02743 223 aa4.81□□□□□ -1.64
GINS3-207ENST00000567400 FGF6P10767 208 aa4.81□□□□□ -1.64
GINS3-207ENST00000567400 ESDP10768 282 aa4.81□□□□□ -1.64
GINS3-207ENST00000567400 RAB4AP20338 218 aa4.81□□□□□ -1.64
GINS3-207ENST00000567400 POLR2KP53803 58 aaKnown RBP4.81□□□□□ -1.64
GINS3-207ENST00000567400 RPL23P62829 140 aaKnown RBP4.81□□□□□ -1.64
GINS3-207ENST00000567400 CIRBPQ14011 172 aaKnown RBP4.81□□□□□ -1.64
GINS3-207ENST00000567400 SMIM15Q7Z3B0 74 aa4.81□□□□□ -1.64
GINS3-207ENST00000567400 CLRN3Q8NCR9 226 aa4.81□□□□□ -1.64
GINS3-207ENST00000567400 NUP35Q8NFH5 326 aa4.81□□□□□ -1.64
GINS3-207ENST00000567400 TMEM242Q9NWH2 141 aa4.81□□□□□ -1.64
GINS3-207ENST00000567400 IGKV3OR2-268A0A0C4DH90 116 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 TRBV27A0A0K0K1C4 114 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 GAGE12HA6NDE8 117 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 KRTAP29-1A8MX34 341 aaPredicted RBP4.8□□□□□ -1.64
GINS3-207ENST00000567400 SMKR1H3BMG3 65 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 H7C423 109 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 I3L3M4 83 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 CHTF8P0CG12 524 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 HNRNPA3P51991 378 aaKnown RBP4.8□□□□□ -1.64
GINS3-207ENST00000567400 FOXI1Q12951 378 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 NRACQ8N912 160 aa4.8□□□□□ -1.64
GINS3-207ENST00000567400 CHCHD10Q8WYQ3 142 aaPredicted RBP4.8□□□□□ -1.64
GINS3-207ENST00000567400 SMIM27A0A1W2PRY6 76 aa4.79□□□□□ -1.64
GINS3-207ENST00000567400 ZNF25P17030 456 aaPredicted RBP4.79□□□□□ -1.64
GINS3-207ENST00000567400 ODF1Q14990 250 aa4.79□□□□□ -1.64
GINS3-207ENST00000567400 ADIRFQ15847 76 aa4.79□□□□□ -1.64
GINS3-207ENST00000567400 TMEM241Q24JQ0 296 aa4.79□□□□□ -1.64
GINS3-207ENST00000567400 HIGD2BQ4VC39 106 aa4.79□□□□□ -1.64
GINS3-207ENST00000567400 AMMECR1LQ6DCA0 310 aa4.79□□□□□ -1.64
GINS3-207ENST00000567400 RNASEKQ6P5S7 137 aaKnown RBP4.79□□□□□ -1.64
GINS3-207ENST00000567400 MRPL52Q86TS9 123 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms