RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 TMEM243Q9BU79 118 aa10.81□□□□□ -0.68
PKD1-233ENST00000567355 TSKUQ8WUA8 353 aa10.8□□□□□ -0.68
PKD1-233ENST00000567355 GFRA4Q9GZZ7 299 aa10.8□□□□□ -0.68
PKD1-233ENST00000567355 OSTCQ9NRP0 149 aa10.8□□□□□ -0.68
PKD1-233ENST00000567355 IGLV4-60A0A075B6I1 120 aa10.79□□□□□ -0.68
PKD1-233ENST00000567355 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
PKD1-233ENST00000567355 ZNF727A8MUV8 499 aa10.79□□□□□ -0.68
PKD1-233ENST00000567355 REG3AQ06141 175 aa10.79□□□□□ -0.68
PKD1-233ENST00000567355 LINC01620Q4KN68 170 aa10.79□□□□□ -0.68
PKD1-233ENST00000567355 C14orf177Q52M58 125 aa10.79□□□□□ -0.68
PKD1-233ENST00000567355 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
PKD1-233ENST00000567355 USP17L23D6RBM5 183 aa10.78□□□□□ -0.68
PKD1-233ENST00000567355 COTL1Q14019 142 aa10.78□□□□□ -0.68
PKD1-233ENST00000567355 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
PKD1-233ENST00000567355 TEX261Q6UWH6 196 aa10.78□□□□□ -0.68
PKD1-233ENST00000567355 DEFB104AQ8WTQ1 72 aa10.78□□□□□ -0.68
PKD1-233ENST00000567355 HIGD1CA8MV81 97 aa10.77□□□□□ -0.69
PKD1-233ENST00000567355 C9JQL5 133 aa10.77□□□□□ -0.69
PKD1-233ENST00000567355 INAFM2P0DMQ5 153 aa10.77□□□□□ -0.69
PKD1-233ENST00000567355 AMTP48728 403 aa10.77□□□□□ -0.69
PKD1-233ENST00000567355 SMIM15Q7Z3B0 74 aa10.77□□□□□ -0.69
PKD1-233ENST00000567355 V9GYV3 84 aa10.77□□□□□ -0.69
PKD1-233ENST00000567355 TRAV8-4A0A0B4J246 113 aa10.76□□□□□ -0.69
PKD1-233ENST00000567355 TRBV6-5A0A0K0K1A5 114 aa10.76□□□□□ -0.69
PKD1-233ENST00000567355 FAM229AH3BQW9 127 aa10.76□□□□□ -0.69
PKD1-233ENST00000567355 NCR2O95944 276 aa10.76□□□□□ -0.69
PKD1-233ENST00000567355 HLA-DQA1P01909 254 aa10.76□□□□□ -0.69
PKD1-233ENST00000567355 FAM74A3Q4VXF1 159 aa10.76□□□□□ -0.69
PKD1-233ENST00000567355 ISOC2Q96AB3 205 aa10.76□□□□□ -0.69
PKD1-233ENST00000567355 TMEM191AQ9H0A3 160 aa10.76□□□□□ -0.69
PKD1-233ENST00000567355 A0A1B0GUT8 65 aa10.75□□□□□ -0.69
PKD1-233ENST00000567355 PRSS1P07477 247 aa10.75□□□□□ -0.69
PKD1-233ENST00000567355 SDHAF1A6NFY7 115 aa10.74□□□□□ -0.69
PKD1-233ENST00000567355 GAS8-AS1O95177 125 aa10.74□□□□□ -0.69
PKD1-233ENST00000567355 RPL23P62829 140 aaKnown RBP10.74□□□□□ -0.69
PKD1-233ENST00000567355 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
PKD1-233ENST00000567355 TMEM241Q24JQ0 296 aa10.74□□□□□ -0.69
PKD1-233ENST00000567355 DGAT2L7PQ6IED9 249 aa10.74□□□□□ -0.69
PKD1-233ENST00000567355 RNF185Q96GF1 192 aa10.74□□□□□ -0.69
PKD1-233ENST00000567355 UBE2L6O14933 153 aa10.73□□□□□ -0.69
PKD1-233ENST00000567355 SCXQ7RTU7 201 aa10.73□□□□□ -0.69
PKD1-233ENST00000567355 BORCS7Q96B45 105 aa10.73□□□□□ -0.69
PKD1-233ENST00000567355 CHAC1Q9BUX1 264 aa10.73□□□□□ -0.69
PKD1-233ENST00000567355 IGLV10-54A0A075B6I4 117 aa10.72□□□□□ -0.69
PKD1-233ENST00000567355 H7C423 109 aa10.72□□□□□ -0.69
PKD1-233ENST00000567355 RAB4AP20338 218 aa10.72□□□□□ -0.69
PKD1-233ENST00000567355 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
PKD1-233ENST00000567355 SMDT1Q9H4I9 107 aa10.72□□□□□ -0.69
PKD1-233ENST00000567355 CLRN3Q8NCR9 226 aa10.71□□□□□ -0.69
PKD1-233ENST00000567355 NAT8Q9UHE5 227 aa10.71□□□□□ -0.69
PKD1-233ENST00000567355 I3L3M4 83 aa10.7□□□□□ -0.7
PKD1-233ENST00000567355 TSHBP01222 138 aa10.7□□□□□ -0.7
PKD1-233ENST00000567355 APCSP02743 223 aa10.7□□□□□ -0.7
PKD1-233ENST00000567355 POLR2KP53803 58 aaKnown RBP10.7□□□□□ -0.7
PKD1-233ENST00000567355 PEA15Q15121 130 aa10.7□□□□□ -0.7
PKD1-233ENST00000567355 LINC00528Q8N1L1 170 aa10.7□□□□□ -0.7
PKD1-233ENST00000567355 C9orf163Q8N9P6 203 aa10.7□□□□□ -0.7
PKD1-233ENST00000567355 CIRBP-AS1Q8TBR5 109 aa10.7□□□□□ -0.7
PKD1-233ENST00000567355 MRAP2Q96G30 205 aa10.7□□□□□ -0.7
PKD1-233ENST00000567355 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.69□□□□□ -0.7
PKD1-233ENST00000567355 TRBV27A0A0K0K1C4 114 aa10.69□□□□□ -0.7
PKD1-233ENST00000567355 SMIM27A0A1W2PRY6 76 aa10.69□□□□□ -0.7
PKD1-233ENST00000567355 IGKV2-29A2NJV5 120 aaPredicted RBP10.69□□□□□ -0.7
PKD1-233ENST00000567355 ESDP10768 282 aa10.69□□□□□ -0.7
PKD1-233ENST00000567355 RPS10P46783 165 aaKnown RBP10.69□□□□□ -0.7
PKD1-233ENST00000567355 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
PKD1-233ENST00000567355 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
PKD1-233ENST00000567355 ST20Q9HBF5 79 aa10.69□□□□□ -0.7
PKD1-233ENST00000567355 NAT8BQ9UHF3 227 aa10.69□□□□□ -0.7
PKD1-233ENST00000567355 FGF6P10767 208 aa10.68□□□□□ -0.7
PKD1-233ENST00000567355 RIGQ13278 110 aa10.68□□□□□ -0.7
PKD1-233ENST00000567355 ADIRFQ15847 76 aa10.68□□□□□ -0.7
PKD1-233ENST00000567355 PMCHP20382 165 aa10.67□□□□□ -0.7
PKD1-233ENST00000567355 KRTAP10-4P60372 401 aaPredicted RBP10.67□□□□□ -0.7
PKD1-233ENST00000567355 FLG2Q5D862 2391 aaPredicted RBP10.67□□□□□ -0.7
PKD1-233ENST00000567355 SLPIP03973 132 aa10.66□□□□□ -0.7
PKD1-233ENST00000567355 PLA2G1BP04054 148 aaKnown RBP10.66□□□□□ -0.7
PKD1-233ENST00000567355 ZNF25P17030 456 aaPredicted RBP10.66□□□□□ -0.7
PKD1-233ENST00000567355 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
PKD1-233ENST00000567355 SDIM1Q6ZPB5 146 aa10.66□□□□□ -0.7
PKD1-233ENST00000567355 NRACQ8N912 160 aa10.66□□□□□ -0.7
PKD1-233ENST00000567355 TMEM242Q9NWH2 141 aa10.66□□□□□ -0.7
PKD1-233ENST00000567355 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.7
PKD1-233ENST00000567355 DMBT1Q9UGM3 2413 aaPredicted RBP10.65□□□□□ -0.7
PKD1-233ENST00000567355 RNASEKQ6P5S7 137 aaKnown RBP10.65□□□□□ -0.7
PKD1-233ENST00000567355 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
PKD1-233ENST00000567355 FAT3Q8TDW7 4589 aa10.65□□□□□ -0.7
PKD1-233ENST00000567355 PKHD1L1Q86WI1 4243 aa10.64□□□□□ -0.71
PKD1-233ENST00000567355 hDV102S1A0JD36 115 aa10.64□□□□□ -0.71
PKD1-233ENST00000567355 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
PKD1-233ENST00000567355 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
PKD1-233ENST00000567355 MRPL52Q86TS9 123 aaKnown RBP10.64□□□□□ -0.71
PKD1-233ENST00000567355 PANO1I0J062 215 aa10.63□□□□□ -0.71
PKD1-233ENST00000567355 PPP1R17O96001 155 aa10.63□□□□□ -0.71
PKD1-233ENST00000567355 CIRBPQ14011 172 aaKnown RBP10.63□□□□□ -0.71
PKD1-233ENST00000567355 FAM104BQ5XKR9 115 aa10.63□□□□□ -0.71
PKD1-233ENST00000567355 OR5A1Q8NGJ0 315 aa10.63□□□□□ -0.71
PKD1-233ENST00000567355 CHCHD10Q8WYQ3 142 aaPredicted RBP10.63□□□□□ -0.71
PKD1-233ENST00000567355 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.63□□□□□ -0.71
PKD1-233ENST00000567355 A0A1B0GW15 77 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms