RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 GIPP09681 153 aaPredicted RBP9.67□□□□□ -0.86
PALB2-205ENST00000567003 SULT1A2P50226 295 aa9.67□□□□□ -0.86
PALB2-205ENST00000567003 KRTAP10-8P60410 259 aa9.67□□□□□ -0.86
PALB2-205ENST00000567003 CYTL1Q9NRR1 136 aa9.67□□□□□ -0.86
PALB2-205ENST00000567003 NDUFS6O75380 124 aaKnown RBP9.66□□□□□ -0.86
PALB2-205ENST00000567003 RPS10P46783 165 aaKnown RBP9.66□□□□□ -0.86
PALB2-205ENST00000567003 A0A096LNI7 61 aa9.65□□□□□ -0.86
PALB2-205ENST00000567003 UBE2L6O14933 153 aa9.65□□□□□ -0.86
PALB2-205ENST00000567003 G3V3Q6 166 aa9.64□□□□□ -0.87
PALB2-205ENST00000567003 H7C1H1 209 aa9.64□□□□□ -0.87
PALB2-205ENST00000567003 S100A9P06702 114 aaKnown RBP9.64□□□□□ -0.87
PALB2-205ENST00000567003 IGLC6P0CF74 106 aa9.63□□□□□ -0.87
PALB2-205ENST00000567003 AMTP48728 403 aa9.63□□□□□ -0.87
PALB2-205ENST00000567003 CFAP161Q6P656 301 aa9.63□□□□□ -0.87
PALB2-205ENST00000567003 RASL11AQ6T310 242 aa9.63□□□□□ -0.87
PALB2-205ENST00000567003 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
PALB2-205ENST00000567003 FAM213BQ8TBF2 198 aa9.63□□□□□ -0.87
PALB2-205ENST00000567003 SFT2D1Q8WV19 159 aa9.63□□□□□ -0.87
PALB2-205ENST00000567003 PFDN1O60925 122 aa9.62□□□□□ -0.87
PALB2-205ENST00000567003 CHCHD10Q8WYQ3 142 aaPredicted RBP9.62□□□□□ -0.87
PALB2-205ENST00000567003 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
PALB2-205ENST00000567003 ARPC5O15511 151 aa9.61□□□□□ -0.87
PALB2-205ENST00000567003 RPL35P42766 123 aaKnown RBP9.61□□□□□ -0.87
PALB2-205ENST00000567003 REG3GQ6UW15 175 aa9.61□□□□□ -0.87
PALB2-205ENST00000567003 SPINK6Q6UWN8 80 aa9.61□□□□□ -0.87
PALB2-205ENST00000567003 TMUB2Q71RG4 321 aa9.61□□□□□ -0.87
PALB2-205ENST00000567003 OR2D3Q8NGH3 330 aa9.61□□□□□ -0.87
PALB2-205ENST00000567003 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
PALB2-205ENST00000567003 GVQW2A0A096LPI5 108 aaPredicted RBP9.6□□□□□ -0.87
PALB2-205ENST00000567003 COTL1Q14019 142 aa9.6□□□□□ -0.87
PALB2-205ENST00000567003 MBD3L1Q8WWY6 194 aa9.6□□□□□ -0.87
PALB2-205ENST00000567003 NIT2Q9NQR4 276 aa9.6□□□□□ -0.87
PALB2-205ENST00000567003 CACNG7P62955 275 aa9.59□□□□□ -0.87
PALB2-205ENST00000567003 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
PALB2-205ENST00000567003 KCNRGQ8N5I3 272 aa9.59□□□□□ -0.87
PALB2-205ENST00000567003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.58□□□□□ -0.88
PALB2-205ENST00000567003 IGKV2-29A2NJV5 120 aaPredicted RBP9.58□□□□□ -0.88
PALB2-205ENST00000567003 SMLR1H3BR10 107 aa9.58□□□□□ -0.88
PALB2-205ENST00000567003 CENPWQ5EE01 88 aa9.58□□□□□ -0.88
PALB2-205ENST00000567003 LYZL1Q6UWQ5 148 aa9.58□□□□□ -0.88
PALB2-205ENST00000567003 Q6ZNX1 250 aa9.58□□□□□ -0.88
PALB2-205ENST00000567003 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
PALB2-205ENST00000567003 FOXI1Q12951 378 aa9.57□□□□□ -0.88
PALB2-205ENST00000567003 TRGC1P0CF51 173 aa9.56□□□□□ -0.88
PALB2-205ENST00000567003 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
PALB2-205ENST00000567003 AMMECR1LQ6DCA0 310 aa9.56□□□□□ -0.88
PALB2-205ENST00000567003 RNASEKQ6P5S7 137 aaKnown RBP9.56□□□□□ -0.88
PALB2-205ENST00000567003 RAB19A4D1S5 217 aa9.55□□□□□ -0.88
PALB2-205ENST00000567003 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
PALB2-205ENST00000567003 NTF3P20783 257 aa9.55□□□□□ -0.88
PALB2-205ENST00000567003 XCL1P47992 114 aa9.55□□□□□ -0.88
PALB2-205ENST00000567003 CCL20P78556 96 aa9.55□□□□□ -0.88
PALB2-205ENST00000567003 Q6ZRP5 223 aa9.55□□□□□ -0.88
PALB2-205ENST00000567003 GATD1Q8NB37 220 aa9.55□□□□□ -0.88
PALB2-205ENST00000567003 RPL39LQ96EH5 51 aaKnown RBP9.55□□□□□ -0.88
PALB2-205ENST00000567003 C11orf52Q96A22 123 aa9.54□□□□□ -0.88
PALB2-205ENST00000567003 CARD19Q96LW7 228 aa9.54□□□□□ -0.88
PALB2-205ENST00000567003 H2AFB1P0C5Y9 115 aa9.53□□□□□ -0.88
PALB2-205ENST00000567003 FGF6P10767 208 aa9.53□□□□□ -0.88
PALB2-205ENST00000567003 GNG13Q9P2W3 67 aa9.53□□□□□ -0.88
PALB2-205ENST00000567003 UMAD1C9J7I0 102 aa9.52□□□□□ -0.89
PALB2-205ENST00000567003 F2Z2F3 143 aa9.52□□□□□ -0.89
PALB2-205ENST00000567003 IFNA1P01562 189 aa9.52□□□□□ -0.89
PALB2-205ENST00000567003 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
PALB2-205ENST00000567003 CCL25O15444 150 aa9.51□□□□□ -0.89
PALB2-205ENST00000567003 APCSP02743 223 aa9.51□□□□□ -0.89
PALB2-205ENST00000567003 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
PALB2-205ENST00000567003 TWIST1Q15672 202 aa9.51□□□□□ -0.89
PALB2-205ENST00000567003 IGHV1-58A0A0C4DH39 117 aa9.5□□□□□ -0.89
PALB2-205ENST00000567003 XKRY2A2RUG3 117 aa9.5□□□□□ -0.89
PALB2-205ENST00000567003 CTRLP40313 264 aa9.5□□□□□ -0.89
PALB2-205ENST00000567003 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
PALB2-205ENST00000567003 OR5A1Q8NGJ0 315 aa9.5□□□□□ -0.89
PALB2-205ENST00000567003 MUC2Q02817 5179 aa9.5□□□□□ -0.89
PALB2-205ENST00000567003 TRBV20OR9-2A0A075B6H5 130 aa9.49□□□□□ -0.89
PALB2-205ENST00000567003 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
PALB2-205ENST00000567003 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
PALB2-205ENST00000567003 GNG4P50150 75 aa9.49□□□□□ -0.89
PALB2-205ENST00000567003 PTTG1IPP53801 180 aa9.49□□□□□ -0.89
PALB2-205ENST00000567003 SYCNQ0VAF6 134 aa9.49□□□□□ -0.89
PALB2-205ENST00000567003 MANBALQ9NQG1 85 aa9.49□□□□□ -0.89
PALB2-205ENST00000567003 NCR2O95944 276 aa9.48□□□□□ -0.89
PALB2-205ENST00000567003 C9orf62Q8N4C0 152 aa9.48□□□□□ -0.89
PALB2-205ENST00000567003 PSORS1C2Q9UIG4 136 aa9.48□□□□□ -0.89
PALB2-205ENST00000567003 FAM231BA6NCW3 169 aa9.47□□□□□ -0.89
PALB2-205ENST00000567003 SDHAF1A6NFY7 115 aa9.47□□□□□ -0.89
PALB2-205ENST00000567003 BCL2P10415 239 aa9.47□□□□□ -0.89
PALB2-205ENST00000567003 ZNF345Q14585 488 aa9.47□□□□□ -0.89
PALB2-205ENST00000567003 NUDT10Q8NFP7 164 aa9.47□□□□□ -0.89
PALB2-205ENST00000567003 NUDT11Q96G61 164 aa9.47□□□□□ -0.89
PALB2-205ENST00000567003 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
PALB2-205ENST00000567003 H7C423 109 aa9.46□□□□□ -0.9
PALB2-205ENST00000567003 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.9
PALB2-205ENST00000567003 BCL2L11O43521 198 aa9.46□□□□□ -0.9
PALB2-205ENST00000567003 CAMPP49913 170 aa9.46□□□□□ -0.9
PALB2-205ENST00000567003 CNFNQ9BYD5 112 aa9.46□□□□□ -0.9
PALB2-205ENST00000567003 LOC107984640A0A0U1RRK4 108 aa9.45□□□□□ -0.9
PALB2-205ENST00000567003 MT-ND6P03923 174 aa9.45□□□□□ -0.9
PALB2-205ENST00000567003 PRR26Q8N8Z3 221 aa9.45□□□□□ -0.9
PALB2-205ENST00000567003 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms