RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 MYMXA0A1B0GTQ4 84 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 RS1O15537 224 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 IGHV3-53P01767 116 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 SCGB1D4Q6XE38 83 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 RNASE8Q8TDE3 154 aaKnown RBP6.33□□□□□ -1.4
LINC01541-201ENST00000566582 HIST1H4GQ99525 98 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 C1QTNF4Q9BXJ3 329 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 OTOGQ6ZRI0 2925 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 UBE2V1Q13404 147 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 FAM110AQ9BQ89 295 aa6.33□□□□□ -1.4
LINC01541-201ENST00000566582 NOP10Q9NPE3 64 aaKnown RBP6.33□□□□□ -1.4
LINC01541-201ENST00000566582 NACAE9PAV3 2078 aa6.32□□□□□ -1.4
LINC01541-201ENST00000566582 ZNF815PA8K554 130 aa6.32□□□□□ -1.4
LINC01541-201ENST00000566582 COTL1Q14019 142 aa6.32□□□□□ -1.4
LINC01541-201ENST00000566582 Q6ZTI0 123 aa6.32□□□□□ -1.4
LINC01541-201ENST00000566582 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 K7EP13 123 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 CCL25O15444 150 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 FXYD2P54710 66 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 AMMECR1LQ6DCA0 310 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 CEMP1Q6PRD7 247 aaPredicted RBP6.31□□□□□ -1.4
LINC01541-201ENST00000566582 CEND1Q8N111 149 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 ZNRF2Q8NHG8 242 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 ZNF479Q96JC4 524 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 C19orf73Q9NVV2 129 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 A4D1N5 150 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 H3BRM9 83 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 SMIM13P0DJ93 91 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 RRN3P1Q2M238 152 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 C16orf74Q96GX8 76 aa6.31□□□□□ -1.4
LINC01541-201ENST00000566582 TRGV2A0A075B6R0 118 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.3□□□□□ -1.4
LINC01541-201ENST00000566582 IGKV2-29A2NJV5 120 aaPredicted RBP6.3□□□□□ -1.4
LINC01541-201ENST00000566582 H3BUT2 72 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 GIG44P09565 113 aaPredicted RBP6.3□□□□□ -1.4
LINC01541-201ENST00000566582 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 NAA38Q9BRA0 125 aaKnown RBP6.3□□□□□ -1.4
LINC01541-201ENST00000566582 NHP2Q9NX24 153 aaKnown RBP6.3□□□□□ -1.4
LINC01541-201ENST00000566582 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 GAGE7O76087 117 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 GAGE12FP0CL80 117 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 GAGE12GP0CL81 117 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 GAGE12IP0CL82 117 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
LINC01541-201ENST00000566582 IL17DQ8TAD2 202 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 PYGO1Q9Y3Y4 419 aa6.3□□□□□ -1.4
LINC01541-201ENST00000566582 FN1P02751 2386 aaKnown RBP6.3□□□□□ -1.4
LINC01541-201ENST00000566582 ANK3Q12955 4377 aaKnown RBP6.3□□□□□ -1.4
LINC01541-201ENST00000566582 A0A0J9YXV3 536 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 C9orf118A6NHY6 69 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
LINC01541-201ENST00000566582 SRSF9Q13242 221 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC01541-201ENST00000566582 TAL2Q16559 108 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
LINC01541-201ENST00000566582 C2CD3Q4AC94 2353 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 TRBV7-3A0A075B6L6 115 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 IGHV3-64A0A075B6Q5 118 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 TRAV4A0A0B4J268 109 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 K7EQD1 137 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 LGALS3P17931 250 aaKnown RBP6.29□□□□□ -1.4
LINC01541-201ENST00000566582 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 NFE4Q86UQ8 179 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 CHCHD7Q9BUK0 85 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 TM2D2Q9BX73 214 aa6.29□□□□□ -1.4
LINC01541-201ENST00000566582 DAZ2Q13117 558 aaKnown RBP6.28□□□□□ -1.4
LINC01541-201ENST00000566582 C4orf48Q5BLP8 95 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 NSD1Q96L73 2696 aaPredicted RBP6.28□□□□□ -1.4
LINC01541-201ENST00000566582 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 J3QQQ9 107 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 K7ERJ3 54 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 CIDEAO60543 219 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 LCE2DQ5TA82 110 aaPredicted RBP6.28□□□□□ -1.4
LINC01541-201ENST00000566582 SLC25A29Q8N8R3 303 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 CSNK1G2-AS1Q8NCQ2 148 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 PLEKHB2Q96CS7 222 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 UBE2D4Q9Y2X8 147 aa6.28□□□□□ -1.4
LINC01541-201ENST00000566582 GAGE12JA6NER3 117 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 ZNF22P17026 224 aaPredicted RBP6.27□□□□□ -1.41
LINC01541-201ENST00000566582 GAGE4Q13068 117 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 GAGE5Q13069 117 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 GAGE13Q4V321 117 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 C9orf66Q5T8R8 295 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 TRGV4A0A0C4DH28 118 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 TRBV10-1A0A0K0K1A3 114 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 TMEM223A0PJW6 202 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 CRLF1O75462 422 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 INSL3P51460 131 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 AMELXQ99217 191 aa6.27□□□□□ -1.41
LINC01541-201ENST00000566582 PLAC8L1A1L4L8 177 aa6.26□□□□□ -1.41
LINC01541-201ENST00000566582 CRYBA4P53673 196 aa6.26□□□□□ -1.41
LINC01541-201ENST00000566582 TSPEAR-AS2P59090 65 aa6.26□□□□□ -1.41
LINC01541-201ENST00000566582 SAMD5Q5TGI4 173 aa6.26□□□□□ -1.41
LINC01541-201ENST00000566582 Q6ZUT4 128 aa6.26□□□□□ -1.41
LINC01541-201ENST00000566582 GTF2H5Q6ZYL4 71 aa6.26□□□□□ -1.41
LINC01541-201ENST00000566582 LEPROTO15243 131 aa6.26□□□□□ -1.41
LINC01541-201ENST00000566582 DAZ4Q86SG3 579 aaKnown RBP6.26□□□□□ -1.41
LINC01541-201ENST00000566582 DAZ3Q9NR90 486 aaKnown RBP6.26□□□□□ -1.41
LINC01541-201ENST00000566582 HIVEP1P15822 2718 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms