RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 PHLDA1Q8WV24 401 aaPredicted RBP13.57□□□□□ -0.24
MSLN-207ENST00000566549 CBY1Q9Y3M2 126 aa13.57□□□□□ -0.24
MSLN-207ENST00000566549 SPCS1Q9Y6A9 102 aa13.57□□□□□ -0.24
MSLN-207ENST00000566549 IGHV3-64A0A075B6Q5 118 aa13.56□□□□□ -0.24
MSLN-207ENST00000566549 K7EP34 96 aa13.56□□□□□ -0.24
MSLN-207ENST00000566549 NOTCH2Q04721 2471 aa13.56□□□□□ -0.24
MSLN-207ENST00000566549 IGLV4-3A0A075B6K6 122 aa13.56□□□□□ -0.24
MSLN-207ENST00000566549 GCN1Q92616 2671 aaKnown RBP13.56□□□□□ -0.24
MSLN-207ENST00000566549 FABP2P12104 132 aa13.55□□□□□ -0.24
MSLN-207ENST00000566549 TAL2Q16559 108 aa13.55□□□□□ -0.24
MSLN-207ENST00000566549 VCX2Q9H322 139 aa13.55□□□□□ -0.24
MSLN-207ENST00000566549 A0A0J9YXV3 536 aa13.54□□□□□ -0.24
MSLN-207ENST00000566549 C12orf74Q32Q52 190 aa13.54□□□□□ -0.24
MSLN-207ENST00000566549 TRGV1A0A0A0MS02 117 aa13.54□□□□□ -0.24
MSLN-207ENST00000566549 EDA2RQ9HAV5 297 aa13.54□□□□□ -0.24
MSLN-207ENST00000566549 SRSF9Q13242 221 aaKnown RBP eCLIP13.53□□□□□ -0.24
MSLN-207ENST00000566549 ZNF418Q8TF45 676 aaPredicted RBP13.53□□□□□ -0.24
MSLN-207ENST00000566549 SPXQ9BT56 116 aa13.53□□□□□ -0.24
MSLN-207ENST00000566549 C16orf95Q9H693 158 aa13.53□□□□□ -0.24
MSLN-207ENST00000566549 NACAE9PAV3 2078 aa13.53□□□□□ -0.24
MSLN-207ENST00000566549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.53□□□□□ -0.24
MSLN-207ENST00000566549 IGKV2-29A2NJV5 120 aaPredicted RBP13.53□□□□□ -0.24
MSLN-207ENST00000566549 LINC00467Q9BRT7 94 aa13.53□□□□□ -0.24
MSLN-207ENST00000566549 HIVEP2P31629 2446 aa13.52□□□□□ -0.25
MSLN-207ENST00000566549 IGHV3-53P01767 116 aa13.52□□□□□ -0.25
MSLN-207ENST00000566549 RBX1P62877 108 aa13.52□□□□□ -0.25
MSLN-207ENST00000566549 RHODO00212 210 aa13.51□□□□□ -0.25
MSLN-207ENST00000566549 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
MSLN-207ENST00000566549 PIK3CD-AS1Q5SR53 167 aa13.51□□□□□ -0.25
MSLN-207ENST00000566549 RS1O15537 224 aa13.51□□□□□ -0.25
MSLN-207ENST00000566549 RPL35AP18077 110 aaKnown RBP13.51□□□□□ -0.25
MSLN-207ENST00000566549 HILS1P60008 231 aa13.51□□□□□ -0.25
MSLN-207ENST00000566549 NFE4Q86UQ8 179 aa13.51□□□□□ -0.25
MSLN-207ENST00000566549 IGLL5B9A064 214 aa13.5□□□□□ -0.25
MSLN-207ENST00000566549 J3QQQ9 107 aa13.5□□□□□ -0.25
MSLN-207ENST00000566549 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
MSLN-207ENST00000566549 FAM104AQ969W3 186 aa13.5□□□□□ -0.25
MSLN-207ENST00000566549 RNF151Q2KHN1 245 aa13.5□□□□□ -0.25
MSLN-207ENST00000566549 PTH2Q96A98 100 aa13.5□□□□□ -0.25
MSLN-207ENST00000566549 CLUHP3Q96NS8 147 aa13.5□□□□□ -0.25
MSLN-207ENST00000566549 CHCHD7Q9BUK0 85 aa13.5□□□□□ -0.25
MSLN-207ENST00000566549 LGALS3P17931 250 aaKnown RBP13.49□□□□□ -0.25
MSLN-207ENST00000566549 Q6ZTI0 123 aa13.49□□□□□ -0.25
MSLN-207ENST00000566549 ZNF479Q96JC4 524 aa13.49□□□□□ -0.25
MSLN-207ENST00000566549 A0A0J9YY99 117 aa13.49□□□□□ -0.25
MSLN-207ENST00000566549 TMEM223A0PJW6 202 aa13.48□□□□□ -0.25
MSLN-207ENST00000566549 ADARB2-AS1A8MUL3 147 aa13.48□□□□□ -0.25
MSLN-207ENST00000566549 OCIAD2Q56VL3 154 aa13.47□□□□□ -0.25
MSLN-207ENST00000566549 GIG44P09565 113 aaPredicted RBP13.47□□□□□ -0.25
MSLN-207ENST00000566549 COTL1Q14019 142 aa13.47□□□□□ -0.25
MSLN-207ENST00000566549 AMELXQ99217 191 aa13.47□□□□□ -0.25
MSLN-207ENST00000566549 NOP10Q9NPE3 64 aaKnown RBP13.47□□□□□ -0.25
MSLN-207ENST00000566549 PYGO1Q9Y3Y4 419 aa13.47□□□□□ -0.25
MSLN-207ENST00000566549 IGLV1-51P01701 117 aa13.46□□□□□ -0.25
MSLN-207ENST00000566549 UBE2D4Q9Y2X8 147 aa13.46□□□□□ -0.25
MSLN-207ENST00000566549 Q6ZUT4 128 aa13.45□□□□□ -0.26
MSLN-207ENST00000566549 IL17DQ8TAD2 202 aa13.45□□□□□ -0.26
MSLN-207ENST00000566549 OR5A1Q8NGJ0 315 aa13.45□□□□□ -0.26
MSLN-207ENST00000566549 APOMO95445 188 aa13.44□□□□□ -0.26
MSLN-207ENST00000566549 C21orf62-AS1Q17RA5 79 aa13.44□□□□□ -0.26
MSLN-207ENST00000566549 TMEM263Q8WUH6 116 aaKnown RBP13.44□□□□□ -0.26
MSLN-207ENST00000566549 LEPROTO15243 131 aa13.44□□□□□ -0.26
MSLN-207ENST00000566549 SFTA2Q6UW10 78 aa13.44□□□□□ -0.26
MSLN-207ENST00000566549 DNAJC30Q96LL9 226 aa13.44□□□□□ -0.26
MSLN-207ENST00000566549 A0A1B0GWB2 263 aa13.43□□□□□ -0.26
MSLN-207ENST00000566549 PCP4P48539 62 aa13.43□□□□□ -0.26
MSLN-207ENST00000566549 KRTAP10-3P60369 221 aa13.43□□□□□ -0.26
MSLN-207ENST00000566549 RRN3P1Q2M238 152 aa13.43□□□□□ -0.26
MSLN-207ENST00000566549 PGPEP1Q9NXJ5 209 aa13.43□□□□□ -0.26
MSLN-207ENST00000566549 TRAV8-3A0A0A6YYJ7 113 aa13.43□□□□□ -0.26
MSLN-207ENST00000566549 C19orf73Q9NVV2 129 aa13.43□□□□□ -0.26
MSLN-207ENST00000566549 C2CD3Q4AC94 2353 aa13.43□□□□□ -0.26
MSLN-207ENST00000566549 LY6G6DO95868 133 aa13.42□□□□□ -0.26
MSLN-207ENST00000566549 SLC25A29Q8N8R3 303 aa13.42□□□□□ -0.26
MSLN-207ENST00000566549 MRPS36P82909 103 aaKnown RBP13.41□□□□□ -0.26
MSLN-207ENST00000566549 SPANXA1Q9NS26 97 aa13.41□□□□□ -0.26
MSLN-207ENST00000566549 OTOGQ6ZRI0 2925 aa13.41□□□□□ -0.26
MSLN-207ENST00000566549 IGHV3-30P01768 117 aa13.41□□□□□ -0.26
MSLN-207ENST00000566549 IGHV3-30-5P0DP03 117 aa13.41□□□□□ -0.26
MSLN-207ENST00000566549 TIMM21Q9BVV7 248 aa13.41□□□□□ -0.26
MSLN-207ENST00000566549 A8MZ25 164 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 H3BMG7 143 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 IGHV3-30-3P0DP02 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 GAGE12JA6NER3 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 K7EQD1 137 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 GAGE7O76087 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 NDUFA7O95182 113 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 GAGE12FP0CL80 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 GAGE12GP0CL81 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 GAGE12IP0CL82 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 GAGE4Q13068 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 GAGE5Q13069 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 GAGE13Q4V321 117 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 MTURNQ8N3F0 131 aa13.4□□□□□ -0.26
MSLN-207ENST00000566549 PF4P02776 101 aa13.39□□□□□ -0.27
MSLN-207ENST00000566549 UBE2D1P51668 147 aa13.39□□□□□ -0.27
MSLN-207ENST00000566549 SPINK8P0C7L1 97 aa13.39□□□□□ -0.27
MSLN-207ENST00000566549 DGAT2L7PQ6IED9 249 aa13.39□□□□□ -0.27
MSLN-207ENST00000566549 C10orf126Q8N4M7 172 aa13.39□□□□□ -0.27
MSLN-207ENST00000566549 TRGV2A0A075B6R0 118 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms