RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 LY6G6DO95868 133 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 INSL3P51460 131 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 EMP1P54849 157 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 RRN3P1Q2M238 152 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 CELSR1Q9NYQ6 3014 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 TMEM223A0PJW6 202 aa9.67□□□□□ -0.86
LINC00563-201ENST00000566370 LYRM7Q5U5X0 104 aa9.67□□□□□ -0.86
LINC00563-201ENST00000566370 DAZ4Q86SG3 579 aaKnown RBP9.67□□□□□ -0.86
LINC00563-201ENST00000566370 AMELXQ99217 191 aa9.67□□□□□ -0.86
LINC00563-201ENST00000566370 DAZ3Q9NR90 486 aaKnown RBP9.67□□□□□ -0.86
LINC00563-201ENST00000566370 SPANXB1Q9NS25 103 aaPredicted RBP9.67□□□□□ -0.86
LINC00563-201ENST00000566370 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
LINC00563-201ENST00000566370 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
LINC00563-201ENST00000566370 K7EP13 123 aa9.66□□□□□ -0.86
LINC00563-201ENST00000566370 C12orf74Q32Q52 190 aa9.66□□□□□ -0.86
LINC00563-201ENST00000566370 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
LINC00563-201ENST00000566370 MXRA5Q9NR99 2828 aa9.66□□□□□ -0.86
LINC00563-201ENST00000566370 SORL1Q92673 2214 aa9.65□□□□□ -0.86
LINC00563-201ENST00000566370 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
LINC00563-201ENST00000566370 ZNF22P17026 224 aaPredicted RBP9.65□□□□□ -0.86
LINC00563-201ENST00000566370 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
LINC00563-201ENST00000566370 MRPS36P82909 103 aaKnown RBP9.65□□□□□ -0.86
LINC00563-201ENST00000566370 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
LINC00563-201ENST00000566370 GEMIN7Q9H840 131 aaKnown RBP9.65□□□□□ -0.86
LINC00563-201ENST00000566370 KMT2BQ9UMN6 2715 aaPredicted RBP9.65□□□□□ -0.86
LINC00563-201ENST00000566370 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.87
LINC00563-201ENST00000566370 A0A0J9YXV3 536 aa9.65□□□□□ -0.87
LINC00563-201ENST00000566370 TMEM238C9JI98 176 aa9.65□□□□□ -0.87
LINC00563-201ENST00000566370 PRM2P04554 102 aa9.65□□□□□ -0.87
LINC00563-201ENST00000566370 FOSL1P15407 271 aa9.65□□□□□ -0.87
LINC00563-201ENST00000566370 C9orf66Q5T8R8 295 aa9.65□□□□□ -0.87
LINC00563-201ENST00000566370 PHLDA1Q8WV24 401 aaPredicted RBP9.65□□□□□ -0.87
LINC00563-201ENST00000566370 ZNF479Q96JC4 524 aa9.65□□□□□ -0.87
LINC00563-201ENST00000566370 OPRPNQ99935 248 aaPredicted RBP9.65□□□□□ -0.87
LINC00563-201ENST00000566370 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.87
LINC00563-201ENST00000566370 CCDC168Q8NDH2 2452 aa9.64□□□□□ -0.87
LINC00563-201ENST00000566370 TLN2Q9Y4G6 2542 aa9.64□□□□□ -0.87
LINC00563-201ENST00000566370 A0A1B0GWB2 263 aa9.64□□□□□ -0.87
LINC00563-201ENST00000566370 Q6ZSN1 163 aa9.64□□□□□ -0.87
LINC00563-201ENST00000566370 NOP10Q9NPE3 64 aaKnown RBP9.64□□□□□ -0.87
LINC00563-201ENST00000566370 A0A0J9YY99 117 aa9.63□□□□□ -0.87
LINC00563-201ENST00000566370 GAGE12BA1L429 117 aa9.63□□□□□ -0.87
LINC00563-201ENST00000566370 Q6ZTI0 123 aa9.63□□□□□ -0.87
LINC00563-201ENST00000566370 LINC00482Q8N8I6 264 aa9.63□□□□□ -0.87
LINC00563-201ENST00000566370 OVOL2Q9BRP0 275 aa9.63□□□□□ -0.87
LINC00563-201ENST00000566370 SONP18583 2426 aaKnown RBP9.62□□□□□ -0.87
LINC00563-201ENST00000566370 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
LINC00563-201ENST00000566370 TRBV6-4A0A1B0GX49 114 aa9.62□□□□□ -0.87
LINC00563-201ENST00000566370 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
LINC00563-201ENST00000566370 IGLL5B9A064 214 aa9.62□□□□□ -0.87
LINC00563-201ENST00000566370 K7ERU9 68 aa9.62□□□□□ -0.87
LINC00563-201ENST00000566370 UBE2L6O14933 153 aa9.62□□□□□ -0.87
LINC00563-201ENST00000566370 SLC25A29Q8N8R3 303 aa9.62□□□□□ -0.87
LINC00563-201ENST00000566370 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
LINC00563-201ENST00000566370 SMR3AQ99954 134 aa9.62□□□□□ -0.87
LINC00563-201ENST00000566370 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
LINC00563-201ENST00000566370 NACAE9PAV3 2078 aa9.61□□□□□ -0.87
LINC00563-201ENST00000566370 TRGV4A0A0C4DH28 118 aa9.61□□□□□ -0.87
LINC00563-201ENST00000566370 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
LINC00563-201ENST00000566370 H7C423 109 aa9.61□□□□□ -0.87
LINC00563-201ENST00000566370 K7ERJ3 54 aa9.61□□□□□ -0.87
LINC00563-201ENST00000566370 RPL24P83731 157 aaKnown RBP9.61□□□□□ -0.87
LINC00563-201ENST00000566370 CBY1Q9Y3M2 126 aa9.61□□□□□ -0.87
LINC00563-201ENST00000566370 SVEP1Q4LDE5 3571 aa9.61□□□□□ -0.87
LINC00563-201ENST00000566370 TENM4Q6N022 2769 aa9.61□□□□□ -0.87
LINC00563-201ENST00000566370 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 GAGE7O76087 117 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 TIRAPP58753 221 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 UBE2D3P61077 147 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 UBE2D2P62837 147 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 HERVK_113P63121 156 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 NAA38Q9BRA0 125 aaKnown RBP9.6□□□□□ -0.87
LINC00563-201ENST00000566370 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 CSDC2Q9Y534 153 aaKnown RBP9.6□□□□□ -0.87
LINC00563-201ENST00000566370 VPS13CQ709C8 3753 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 CHD6Q8TD26 2715 aa9.6□□□□□ -0.87
LINC00563-201ENST00000566370 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.59□□□□□ -0.87
LINC00563-201ENST00000566370 IGHV1-58A0A0C4DH39 117 aa9.59□□□□□ -0.87
LINC00563-201ENST00000566370 Q6ZUT4 128 aa9.59□□□□□ -0.87
LINC00563-201ENST00000566370 GAGE12JA6NER3 117 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 IGHV3-30-3P0DP02 117 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 HIVEP2P31629 2446 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 GAGE4Q13068 117 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 GAGE5Q13069 117 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 GAGE13Q4V321 117 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 CSNK1G2-AS1Q8NCQ2 148 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 TMEM243Q9BU79 118 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 WFDC10AQ9H1F0 79 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 PDZD2O15018 2839 aa9.58□□□□□ -0.88
LINC00563-201ENST00000566370 INAFM1C9JVW0 142 aa9.57□□□□□ -0.88
LINC00563-201ENST00000566370 GIG44P09565 113 aaPredicted RBP9.57□□□□□ -0.88
LINC00563-201ENST00000566370 UBE2D1P51668 147 aa9.57□□□□□ -0.88
LINC00563-201ENST00000566370 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
LINC00563-201ENST00000566370 CEMP1Q6PRD7 247 aaPredicted RBP9.57□□□□□ -0.88
LINC00563-201ENST00000566370 PGPEP1Q9NXJ5 209 aa9.57□□□□□ -0.88
LINC00563-201ENST00000566370 IGHV3-64A0A075B6Q5 118 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms