RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RNASE7Q9H1E1 156 aaKnown RBP11.81□□□□□ -0.52
USB1-213ENST00000566292 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
USB1-213ENST00000566292 OCC1Q8TAD7 63 aa11.8□□□□□ -0.52
USB1-213ENST00000566292 RPP21Q9H633 154 aaKnown RBP11.8□□□□□ -0.52
USB1-213ENST00000566292 TWIST1Q15672 202 aa11.79□□□□□ -0.52
USB1-213ENST00000566292 FAT3Q8TDW7 4589 aa11.78□□□□□ -0.52
USB1-213ENST00000566292 PANO1I0J062 215 aa11.78□□□□□ -0.52
USB1-213ENST00000566292 GATD1Q8NB37 220 aa11.78□□□□□ -0.52
USB1-213ENST00000566292 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.78□□□□□ -0.52
USB1-213ENST00000566292 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.53
USB1-213ENST00000566292 TRAV26-2A0A0B4J265 109 aa11.77□□□□□ -0.53
USB1-213ENST00000566292 AMTP48728 403 aa11.77□□□□□ -0.53
USB1-213ENST00000566292 COTL1Q14019 142 aa11.77□□□□□ -0.53
USB1-213ENST00000566292 Q6ZNX1 250 aa11.77□□□□□ -0.53
USB1-213ENST00000566292 CLRN3Q8NCR9 226 aa11.77□□□□□ -0.53
USB1-213ENST00000566292 GTSF1Q8WW33 167 aa11.77□□□□□ -0.53
USB1-213ENST00000566292 SDIM1Q6ZPB5 146 aa11.76□□□□□ -0.53
USB1-213ENST00000566292 UBE2L6O14933 153 aa11.75□□□□□ -0.53
USB1-213ENST00000566292 FOXA3P55318 350 aaPredicted RBP11.75□□□□□ -0.53
USB1-213ENST00000566292 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
USB1-213ENST00000566292 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
USB1-213ENST00000566292 CNBPP62633 177 aaKnown RBP11.74□□□□□ -0.53
USB1-213ENST00000566292 ALKAL2Q6UX46 152 aa11.74□□□□□ -0.53
USB1-213ENST00000566292 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
USB1-213ENST00000566292 SLPIP03973 132 aa11.73□□□□□ -0.53
USB1-213ENST00000566292 TMEM250H0YL14 139 aa11.72□□□□□ -0.53
USB1-213ENST00000566292 BLOC1S1P78537 153 aa11.72□□□□□ -0.53
USB1-213ENST00000566292 LYPD6BQ8NI32 183 aa11.72□□□□□ -0.53
USB1-213ENST00000566292 GATCO43716 136 aaKnown RBP11.71□□□□□ -0.53
USB1-213ENST00000566292 HNRNPA3P51991 378 aaKnown RBP11.71□□□□□ -0.53
USB1-213ENST00000566292 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.53
USB1-213ENST00000566292 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.53
USB1-213ENST00000566292 AKAP14Q86UN6 197 aa11.71□□□□□ -0.53
USB1-213ENST00000566292 OXTP01178 125 aa11.7□□□□□ -0.54
USB1-213ENST00000566292 SMIM15Q7Z3B0 74 aa11.7□□□□□ -0.54
USB1-213ENST00000566292 C15orf56Q8N910 161 aa11.7□□□□□ -0.54
USB1-213ENST00000566292 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
USB1-213ENST00000566292 IGKV3OR2-268A0A0C4DH90 116 aa11.69□□□□□ -0.54
USB1-213ENST00000566292 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
USB1-213ENST00000566292 GAGE12HA6NDE8 117 aa11.69□□□□□ -0.54
USB1-213ENST00000566292 NCR2O95944 276 aa11.69□□□□□ -0.54
USB1-213ENST00000566292 AP5S1Q9NUS5 200 aa11.69□□□□□ -0.54
USB1-213ENST00000566292 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
USB1-213ENST00000566292 IGHV3-64A0A075B6Q5 118 aa11.68□□□□□ -0.54
USB1-213ENST00000566292 SDHAF1A6NFY7 115 aa11.68□□□□□ -0.54
USB1-213ENST00000566292 A8MWL6 223 aa11.68□□□□□ -0.54
USB1-213ENST00000566292 CEBPGP53567 150 aa11.68□□□□□ -0.54
USB1-213ENST00000566292 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
USB1-213ENST00000566292 APCSP02743 223 aa11.67□□□□□ -0.54
USB1-213ENST00000566292 CHTF8P0CG12 524 aa11.67□□□□□ -0.54
USB1-213ENST00000566292 CT83Q5H943 113 aa11.67□□□□□ -0.54
USB1-213ENST00000566292 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
USB1-213ENST00000566292 TEX261Q6UWH6 196 aa11.67□□□□□ -0.54
USB1-213ENST00000566292 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.66□□□□□ -0.54
USB1-213ENST00000566292 H7C423 109 aa11.66□□□□□ -0.54
USB1-213ENST00000566292 RNASEKQ6P5S7 137 aaKnown RBP11.66□□□□□ -0.54
USB1-213ENST00000566292 FAM231BA6NCW3 169 aa11.65□□□□□ -0.54
USB1-213ENST00000566292 FGF6P10767 208 aa11.65□□□□□ -0.54
USB1-213ENST00000566292 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.54
USB1-213ENST00000566292 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
USB1-213ENST00000566292 I3L3M4 83 aa11.64□□□□□ -0.55
USB1-213ENST00000566292 SPACA4Q8TDM5 124 aa11.64□□□□□ -0.55
USB1-213ENST00000566292 SMIM7Q9BQ49 75 aa11.64□□□□□ -0.55
USB1-213ENST00000566292 A0A087WYN8 130 aa11.63□□□□□ -0.55
USB1-213ENST00000566292 PMCHP20382 165 aa11.63□□□□□ -0.55
USB1-213ENST00000566292 HIGD2BQ4VC39 106 aa11.63□□□□□ -0.55
USB1-213ENST00000566292 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
USB1-213ENST00000566292 LINC01551Q86U37 167 aa11.63□□□□□ -0.55
USB1-213ENST00000566292 HIGD1CA8MV81 97 aa11.62□□□□□ -0.55
USB1-213ENST00000566292 NDUFS6O75380 124 aaKnown RBP11.62□□□□□ -0.55
USB1-213ENST00000566292 ESDP10768 282 aa11.62□□□□□ -0.55
USB1-213ENST00000566292 TSKUQ8WUA8 353 aa11.62□□□□□ -0.55
USB1-213ENST00000566292 RNF185Q96GF1 192 aa11.62□□□□□ -0.55
USB1-213ENST00000566292 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
USB1-213ENST00000566292 A0A1B0GUT8 65 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 TSHBP01222 138 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 SRP19P09132 144 aaKnown RBP11.61□□□□□ -0.55
USB1-213ENST00000566292 ZNF25P17030 456 aaPredicted RBP11.61□□□□□ -0.55
USB1-213ENST00000566292 FOXI1Q12951 378 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 OR5A1Q8NGJ0 315 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 BORCS7Q96B45 105 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 DPH3Q96FX2 82 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 FAM210AQ96ND0 272 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 TMEM191AQ9H0A3 160 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 TMEM242Q9NWH2 141 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 HMCN2Q8NDA2 5059 aa11.61□□□□□ -0.55
USB1-213ENST00000566292 ZNF727A8MUV8 499 aa11.6□□□□□ -0.55
USB1-213ENST00000566292 RPS10P46783 165 aaKnown RBP11.6□□□□□ -0.55
USB1-213ENST00000566292 COX6A2Q02221 97 aa11.6□□□□□ -0.55
USB1-213ENST00000566292 ST20Q9HBF5 79 aa11.6□□□□□ -0.55
USB1-213ENST00000566292 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
USB1-213ENST00000566292 PLAC8Q9NZF1 115 aa11.6□□□□□ -0.55
USB1-213ENST00000566292 GVQW2A0A096LPI5 108 aaPredicted RBP11.59□□□□□ -0.55
USB1-213ENST00000566292 RAB4AP20338 218 aa11.59□□□□□ -0.55
USB1-213ENST00000566292 POLR2KP53803 58 aaKnown RBP11.59□□□□□ -0.55
USB1-213ENST00000566292 PRSS3P2Q8NHM4 247 aa11.59□□□□□ -0.55
USB1-213ENST00000566292 AMN1Q8IY45 258 aa11.58□□□□□ -0.56
USB1-213ENST00000566292 BTF3L4Q96K17 158 aa11.58□□□□□ -0.56
USB1-213ENST00000566292 V9GYV3 84 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms