RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 K7EQD1 137 aa2.58□□□□□ -2
CHD9-213ENST00000564845 PRO1854Q9UHT4 67 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BKO60814 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 NXPH4O95158 308 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BJP06899 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 CTSGP08311 255 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BOP23527 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BBP33778 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 CTRLP40313 264 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BDP58876 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 RPL37AP61513 92 aaKnown RBP2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BCP62807 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST2H2BEQ16778 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BHQ93079 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BNQ99877 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 HIST1H2BMQ99879 126 aa2.58□□□□□ -2
CHD9-213ENST00000564845 NUP35Q8NFH5 326 aa2.58□□□□□ -2
CHD9-213ENST00000564845 IBA57-AS1B1ANH7 110 aa2.58□□□□□ -2
CHD9-213ENST00000564845 NDUFC2-KCTD14E9PQ53 114 aa2.58□□□□□ -2
CHD9-213ENST00000564845 MYCNOSP40205 109 aa2.58□□□□□ -2
CHD9-213ENST00000564845 DOPEY2Q9Y3R5 2298 aa2.58□□□□□ -2
CHD9-213ENST00000564845 A0A0B4J2C4 111 aa2.58□□□□□ -2
CHD9-213ENST00000564845 NDUFA1O15239 70 aa2.58□□□□□ -2
CHD9-213ENST00000564845 XAGE1AQ9HD64 81 aa2.58□□□□□ -2
CHD9-213ENST00000564845 CSDC2Q9Y534 153 aaKnown RBP2.58□□□□□ -2
CHD9-213ENST00000564845 TRAV26-2A0A0B4J265 109 aa2.58□□□□□ -2
CHD9-213ENST00000564845 TRBV30A0A0K0K1B3 111 aa2.58□□□□□ -2
CHD9-213ENST00000564845 TRBV6-4A0A1B0GX49 114 aa2.58□□□□□ -2
CHD9-213ENST00000564845 H3BRN7 92 aa2.58□□□□□ -2
CHD9-213ENST00000564845 SONP18583 2426 aaKnown RBP2.58□□□□□ -2
CHD9-213ENST00000564845 IGHV1OR15-1A0A075B7D0 117 aa2.58□□□□□ -2
CHD9-213ENST00000564845 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
CHD9-213ENST00000564845 TEN1Q86WV5 123 aa2.58□□□□□ -2
CHD9-213ENST00000564845 SPATA3Q8NHX4 192 aa2.58□□□□□ -2
CHD9-213ENST00000564845 DPH3Q96FX2 82 aa2.58□□□□□ -2
CHD9-213ENST00000564845 FAM208BQ5VWN6 2430 aa2.58□□□□□ -2
CHD9-213ENST00000564845 CGB3P0DN86 165 aa2.57□□□□□ -2
CHD9-213ENST00000564845 CGB7P0DN87 165 aa2.57□□□□□ -2
CHD9-213ENST00000564845 NSUN5P1Q3KNT7 163 aa2.57□□□□□ -2
CHD9-213ENST00000564845 KLHL30-AS1Q8NEE0 82 aa2.57□□□□□ -2
CHD9-213ENST00000564845 PRORYQ9H606 182 aa2.57□□□□□ -2
CHD9-213ENST00000564845 HILS1P60008 231 aa2.57□□□□□ -2
CHD9-213ENST00000564845 PATE2Q6UY27 113 aa2.57□□□□□ -2
CHD9-213ENST00000564845 IGF2BP2-AS1Q96M15 143 aa2.57□□□□□ -2
CHD9-213ENST00000564845 IGHV3OR16-12A0A075B7B8 117 aa2.57□□□□□ -2
CHD9-213ENST00000564845 Q86TA4 180 aa2.57□□□□□ -2
CHD9-213ENST00000564845 FGF6P10767 208 aa2.57□□□□□ -2
CHD9-213ENST00000564845 TAX1BP3O14907 124 aa2.57□□□□□ -2
CHD9-213ENST00000564845 TRAV8-2A0A0B4J237 113 aa2.57□□□□□ -2
CHD9-213ENST00000564845 PSG8Q9UQ74 426 aa2.57□□□□□ -2
CHD9-213ENST00000564845 CSPG4Q6UVK1 2322 aa2.57□□□□□ -2
CHD9-213ENST00000564845 IGHV7-4-1A0A0J9YVY3 117 aa2.57□□□□□ -2
CHD9-213ENST00000564845 C9JAW5 83 aa2.57□□□□□ -2
CHD9-213ENST00000564845 IGLV2-23P01705 113 aa2.57□□□□□ -2
CHD9-213ENST00000564845 DEFB113Q30KQ7 82 aa2.57□□□□□ -2
CHD9-213ENST00000564845 Q6JHZ5 121 aa2.57□□□□□ -2
CHD9-213ENST00000564845 J3KT08 172 aa2.57□□□□□ -2
CHD9-213ENST00000564845 ODF1Q14990 250 aa2.57□□□□□ -2
CHD9-213ENST00000564845 ZNF876PQ49A33 203 aa2.57□□□□□ -2
CHD9-213ENST00000564845 RHPN1-AS1Q9BWJ2 59 aa2.57□□□□□ -2
CHD9-213ENST00000564845 SMAD5-AS1Q9Y6J3 95 aa2.57□□□□□ -2
CHD9-213ENST00000564845 TENM3Q9P273 2699 aa2.57□□□□□ -2
CHD9-213ENST00000564845 TRAV12-2A0A075B6T6 113 aa2.57□□□□□ -2
CHD9-213ENST00000564845 WFDC11Q8NEX6 87 aa2.57□□□□□ -2
CHD9-213ENST00000564845 B9D2Q9BPU9 175 aa2.57□□□□□ -2
CHD9-213ENST00000564845 PRO0255Q9UI72 69 aa2.57□□□□□ -2
CHD9-213ENST00000564845 HECTD1Q9ULT8 2610 aa2.56□□□□□ -2
CHD9-213ENST00000564845 ATP6V0E1O15342 81 aa2.56□□□□□ -2
CHD9-213ENST00000564845 NPYP01303 97 aa2.56□□□□□ -2
CHD9-213ENST00000564845 NPC2P61916 151 aa2.56□□□□□ -2
CHD9-213ENST00000564845 UNQ9165/PRO28630Q6UXU0 137 aa2.56□□□□□ -2
CHD9-213ENST00000564845 TINCRA0A1B0GVN0 87 aa2.56□□□□□ -2
CHD9-213ENST00000564845 PRAC2D3DTV9 90 aa2.56□□□□□ -2
CHD9-213ENST00000564845 COX8AP10176 69 aa2.56□□□□□ -2
CHD9-213ENST00000564845 GATA1P15976 413 aaPredicted RBP2.56□□□□□ -2
CHD9-213ENST00000564845 IGHV4-59P01825 116 aa2.56□□□□□ -2
CHD9-213ENST00000564845 GDF5OSQ5U4N7 250 aa2.56□□□□□ -2
CHD9-213ENST00000564845 ADAMTSL5Q6ZMM2 481 aa2.56□□□□□ -2
CHD9-213ENST00000564845 TRBV10-3A0A0K0K1G6 114 aa2.56□□□□□ -2
CHD9-213ENST00000564845 CCDC168Q8NDH2 2452 aa2.56□□□□□ -2
CHD9-213ENST00000564845 MAST4O15021 2626 aa2.56□□□□□ -2
CHD9-213ENST00000564845 CRYGCP07315 174 aa2.56□□□□□ -2
CHD9-213ENST00000564845 MSRB1Q9NZV6 116 aa2.56□□□□□ -2
CHD9-213ENST00000564845 NAV2Q8IVL1 2488 aa2.56□□□□□ -2
CHD9-213ENST00000564845 LINC00467Q9BRT7 94 aa2.56□□□□□ -2
CHD9-213ENST00000564845 TRBV7-6A0A0J9YX20 115 aa2.56□□□□□ -2
CHD9-213ENST00000564845 FLNAP21333 2647 aaKnown RBP2.56□□□□□ -2
CHD9-213ENST00000564845 C2orf66Q6UXQ4 117 aa2.56□□□□□ -2
CHD9-213ENST00000564845 FXYD5Q96DB9 178 aa2.56□□□□□ -2
CHD9-213ENST00000564845 WFDC10AQ9H1F0 79 aa2.56□□□□□ -2
CHD9-213ENST00000564845 TRAV13-1A0A0B4J241 112 aa2.56□□□□□ -2
CHD9-213ENST00000564845 PAX4O43316 350 aa2.56□□□□□ -2
CHD9-213ENST00000564845 C2orf82Q6UX34 121 aa2.56□□□□□ -2
CHD9-213ENST00000564845 LIMD2Q9BT23 127 aa2.56□□□□□ -2
CHD9-213ENST00000564845 A0A087WZ39 114 aa2.56□□□□□ -2
CHD9-213ENST00000564845 GAGE12BA1L429 117 aa2.56□□□□□ -2
CHD9-213ENST00000564845 CYSRT1A8MQ03 144 aa2.56□□□□□ -2
CHD9-213ENST00000564845 COX7A2LO14548 114 aa2.56□□□□□ -2
CHD9-213ENST00000564845 OXLD1Q5BKU9 147 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms