RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ADIRFQ15847 76 aa12.12□□□□□ -0.47
SYNGR3-204ENST00000564642 Q8N1X5 172 aa12.12□□□□□ -0.47
SYNGR3-204ENST00000564642 V9GYV3 84 aa12.12□□□□□ -0.47
SYNGR3-204ENST00000564642 HSPG2P98160 4391 aa12.12□□□□□ -0.47
SYNGR3-204ENST00000564642 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
SYNGR3-204ENST00000564642 UBE2L6O14933 153 aa12.11□□□□□ -0.47
SYNGR3-204ENST00000564642 AMTP48728 403 aa12.11□□□□□ -0.47
SYNGR3-204ENST00000564642 MIAQ16674 131 aa12.11□□□□□ -0.47
SYNGR3-204ENST00000564642 LINC00269Q8N2A0 174 aa12.11□□□□□ -0.47
SYNGR3-204ENST00000564642 RPL39LQ96EH5 51 aaKnown RBP12.11□□□□□ -0.47
SYNGR3-204ENST00000564642 XGP55808 180 aa12.09□□□□□ -0.47
SYNGR3-204ENST00000564642 RIGQ13278 110 aa12.09□□□□□ -0.47
SYNGR3-204ENST00000564642 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
SYNGR3-204ENST00000564642 TMEM191AQ9H0A3 160 aa12.09□□□□□ -0.47
SYNGR3-204ENST00000564642 PRR34Q9NV39 138 aa12.09□□□□□ -0.47
SYNGR3-204ENST00000564642 APOBP04114 4563 aaKnown RBP12.08□□□□□ -0.48
SYNGR3-204ENST00000564642 A0A1B0GUV1 79 aa12.08□□□□□ -0.48
SYNGR3-204ENST00000564642 NUP35Q8NFH5 326 aa12.08□□□□□ -0.48
SYNGR3-204ENST00000564642 NAT8BQ9UHF3 227 aa12.08□□□□□ -0.48
SYNGR3-204ENST00000564642 NCR2O95944 276 aa12.07□□□□□ -0.48
SYNGR3-204ENST00000564642 HLA-DQA1P01909 254 aa12.07□□□□□ -0.48
SYNGR3-204ENST00000564642 RAB14P61106 215 aa12.07□□□□□ -0.48
SYNGR3-204ENST00000564642 REG3AQ06141 175 aa12.07□□□□□ -0.48
SYNGR3-204ENST00000564642 C14orf177Q52M58 125 aa12.07□□□□□ -0.48
SYNGR3-204ENST00000564642 C20orf203Q8NBC4 194 aa12.07□□□□□ -0.48
SYNGR3-204ENST00000564642 TMEM70Q9BUB7 260 aa12.07□□□□□ -0.48
SYNGR3-204ENST00000564642 SDHAF1A6NFY7 115 aa12.06□□□□□ -0.48
SYNGR3-204ENST00000564642 PMCHP20382 165 aa12.06□□□□□ -0.48
SYNGR3-204ENST00000564642 IGLV4-60A0A075B6I1 120 aa12.05□□□□□ -0.48
SYNGR3-204ENST00000564642 RAB4AP20338 218 aa12.05□□□□□ -0.48
SYNGR3-204ENST00000564642 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
SYNGR3-204ENST00000564642 MRAP2Q96G30 205 aa12.05□□□□□ -0.48
SYNGR3-204ENST00000564642 ST20Q9HBF5 79 aa12.05□□□□□ -0.48
SYNGR3-204ENST00000564642 TRBV6-5A0A0K0K1A5 114 aa12.04□□□□□ -0.48
SYNGR3-204ENST00000564642 I3L3M4 83 aa12.04□□□□□ -0.48
SYNGR3-204ENST00000564642 APCSP02743 223 aa12.04□□□□□ -0.48
SYNGR3-204ENST00000564642 RNF185Q96GF1 192 aa12.04□□□□□ -0.48
SYNGR3-204ENST00000564642 TRAV8-4A0A0B4J246 113 aa12.03□□□□□ -0.48
SYNGR3-204ENST00000564642 SMIM27A0A1W2PRY6 76 aa12.03□□□□□ -0.48
SYNGR3-204ENST00000564642 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
SYNGR3-204ENST00000564642 IGLV10-54A0A075B6I4 117 aa12.02□□□□□ -0.49
SYNGR3-204ENST00000564642 EPM2AB3EWF7 344 aa12.02□□□□□ -0.49
SYNGR3-204ENST00000564642 USP17L23D6RBM5 183 aa12.02□□□□□ -0.49
SYNGR3-204ENST00000564642 GAS8-AS1O95177 125 aa12.02□□□□□ -0.49
SYNGR3-204ENST00000564642 H7C423 109 aa12.01□□□□□ -0.49
SYNGR3-204ENST00000564642 HAMPP81172 84 aa12.01□□□□□ -0.49
SYNGR3-204ENST00000564642 RNASEKQ6P5S7 137 aaKnown RBP12.01□□□□□ -0.49
SYNGR3-204ENST00000564642 FAM30AQ9NZY2 134 aa12.01□□□□□ -0.49
SYNGR3-204ENST00000564642 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
SYNGR3-204ENST00000564642 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
SYNGR3-204ENST00000564642 PPP1R17O96001 155 aa12□□□□□ -0.49
SYNGR3-204ENST00000564642 RPS10P46783 165 aaKnown RBP12□□□□□ -0.49
SYNGR3-204ENST00000564642 CAMPP49913 170 aa12□□□□□ -0.49
SYNGR3-204ENST00000564642 LINC01620Q4KN68 170 aa12□□□□□ -0.49
SYNGR3-204ENST00000564642 KRTAP26-1Q6PEX3 210 aa12□□□□□ -0.49
SYNGR3-204ENST00000564642 A0A1B0GW15 77 aa11.99□□□□□ -0.49
SYNGR3-204ENST00000564642 SMR3BP02814 79 aaPredicted RBP11.99□□□□□ -0.49
SYNGR3-204ENST00000564642 IGKV3OR2-268A0A0C4DH90 116 aa11.98□□□□□ -0.49
SYNGR3-204ENST00000564642 SMKR1H3BMG3 65 aa11.98□□□□□ -0.49
SYNGR3-204ENST00000564642 FGF6P10767 208 aa11.98□□□□□ -0.49
SYNGR3-204ENST00000564642 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
SYNGR3-204ENST00000564642 BTF3L4Q96K17 158 aa11.98□□□□□ -0.49
SYNGR3-204ENST00000564642 TMEM242Q9NWH2 141 aa11.98□□□□□ -0.49
SYNGR3-204ENST00000564642 TRBV27A0A0K0K1C4 114 aa11.97□□□□□ -0.49
SYNGR3-204ENST00000564642 TSHBP01222 138 aa11.97□□□□□ -0.49
SYNGR3-204ENST00000564642 S100A8P05109 93 aa11.97□□□□□ -0.49
SYNGR3-204ENST00000564642 FAM104BQ5XKR9 115 aa11.97□□□□□ -0.49
SYNGR3-204ENST00000564642 TMEM101Q96IK0 257 aa11.97□□□□□ -0.49
SYNGR3-204ENST00000564642 VCYO14598 125 aa11.96□□□□□ -0.49
SYNGR3-204ENST00000564642 PPP1R2P9O14990 202 aa11.96□□□□□ -0.49
SYNGR3-204ENST00000564642 PRSS1P07477 247 aa11.96□□□□□ -0.49
SYNGR3-204ENST00000564642 ZNF25P17030 456 aaPredicted RBP11.96□□□□□ -0.49
SYNGR3-204ENST00000564642 MRPL51Q4U2R6 128 aaKnown RBP11.96□□□□□ -0.49
SYNGR3-204ENST00000564642 Q5VSD8 79 aa11.96□□□□□ -0.49
SYNGR3-204ENST00000564642 CLRN3Q8NCR9 226 aa11.96□□□□□ -0.49
SYNGR3-204ENST00000564642 FAM229AH3BQW9 127 aa11.95□□□□□ -0.5
SYNGR3-204ENST00000564642 ESDP10768 282 aa11.95□□□□□ -0.5
SYNGR3-204ENST00000564642 HBBP68871 147 aa11.95□□□□□ -0.5
SYNGR3-204ENST00000564642 PNRC1Q12796 327 aaPredicted RBP11.95□□□□□ -0.5
SYNGR3-204ENST00000564642 DGAT2L7PQ6IED9 249 aa11.95□□□□□ -0.5
SYNGR3-204ENST00000564642 MRPL54Q6P161 138 aaKnown RBP11.95□□□□□ -0.5
SYNGR3-204ENST00000564642 Q6ZSA8 131 aa11.95□□□□□ -0.5
SYNGR3-204ENST00000564642 LINC00862A6NCI5 91 aa11.94□□□□□ -0.5
SYNGR3-204ENST00000564642 F8W036 122 aa11.94□□□□□ -0.5
SYNGR3-204ENST00000564642 FCER1GP30273 86 aa11.94□□□□□ -0.5
SYNGR3-204ENST00000564642 CKS2P33552 79 aa11.94□□□□□ -0.5
SYNGR3-204ENST00000564642 SUMO2P61956 95 aaKnown RBP11.94□□□□□ -0.5
SYNGR3-204ENST00000564642 CLLU1Q5K131 121 aa11.94□□□□□ -0.5
SYNGR3-204ENST00000564642 NRACQ8N912 160 aa11.94□□□□□ -0.5
SYNGR3-204ENST00000564642 KIR2DL4Q99706 377 aa11.93□□□□□ -0.5
SYNGR3-204ENST00000564642 hDV102S1A0JD36 115 aa11.92□□□□□ -0.5
SYNGR3-204ENST00000564642 C7orf77A4D0Y5 90 aa11.92□□□□□ -0.5
SYNGR3-204ENST00000564642 GAGE12HA6NDE8 117 aa11.92□□□□□ -0.5
SYNGR3-204ENST00000564642 OR5A1Q8NGJ0 315 aa11.92□□□□□ -0.5
SYNGR3-204ENST00000564642 MT-ND4LP03901 98 aa11.91□□□□□ -0.5
SYNGR3-204ENST00000564642 CFAP161Q6P656 301 aa11.91□□□□□ -0.5
SYNGR3-204ENST00000564642 CHCHD10Q8WYQ3 142 aaPredicted RBP11.91□□□□□ -0.5
SYNGR3-204ENST00000564642 ANAPC16Q96DE5 110 aa11.91□□□□□ -0.5
SYNGR3-204ENST00000564642 A0A1B0GXF2 115 aa11.9□□□□□ -0.5
SYNGR3-204ENST00000564642 ATP5L2Q7Z4Y8 100 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms