RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 DYNLRB1Q9NP97 96 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 PLAC8Q9NZF1 115 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 LSM2Q9Y333 95 aaKnown RBP0.34□□□□□ -2.36
CHD9-211ENST00000564600 LENEPQ9Y5L5 61 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 LINC00312Q9Y6C7 94 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 IFT140Q96RY7 1462 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 MYO18BQ8IUG5 2567 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 SPTBP11277 2137 aa0.34□□□□□ -2.36
CHD9-211ENST00000564600 PDZD2O15018 2839 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 PLXNA2O75051 1894 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 ZNF292O60281 2723 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 RNF213Q63HN8 5207 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 BLMP54132 1417 aaPredicted RBP0.33□□□□□ -2.36
CHD9-211ENST00000564600 FAM236AA0A1B0GUQ0 79 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 FAM236BA0A1B0GV22 79 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 HCG22E2RYF7 251 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 CORTO00230 105 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 NDUFA2O43678 99 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 SPINK4O60575 86 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 CFDP00746 253 aaPredicted RBP0.33□□□□□ -2.36
CHD9-211ENST00000564600 MGPP08493 103 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 CCL3L1P16619 93 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 RPL37P61927 97 aaKnown RBP0.33□□□□□ -2.36
CHD9-211ENST00000564600 GNG11P61952 73 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 UBA52P62987 128 aaKnown RBP0.33□□□□□ -2.36
CHD9-211ENST00000564600 PIGYQ3MUY2 71 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 S100A7L2Q5SY68 101 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 Q5VV11 94 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 Q6AWC8 147 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 Q6ZRX8 168 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 COMMD6Q7Z4G1 85 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 C5orf38Q86SI9 138 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 USMG5Q96IX5 58 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 SDF2Q99470 211 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 Q9H521 79 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 SCN3BQ9NY72 215 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 CDK5RAP2Q96SN8 1893 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 FRAS1Q86XX4 4008 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 ACANP16112 2415 aa0.33□□□□□ -2.36
CHD9-211ENST00000564600 PPIP5K1Q6PFW1 1433 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 ZDBF2Q9HCK1 2354 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 MAP2P11137 1827 aaKnown RBP0.32□□□□□ -2.36
CHD9-211ENST00000564600 TRBV7-3A0A075B6L6 115 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 A0A096LNT2 108 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 NBDYA0A0U1RRE5 68 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 A0A1B0GWA3 101 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 TMEM218A2RU14 115 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 F8VRH5 84 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 M0R135 149 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 DLEU1O43261 78 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 HAMPP81172 84 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 RBM3P98179 157 aaKnown RBP0.32□□□□□ -2.36
CHD9-211ENST00000564600 HMGN3Q15651 99 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 CFAP126Q5VTH2 177 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 ZNF720Q7Z2F6 126 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 ACBD7Q8N6N7 88 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 FDCSPQ8NFU4 85 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 C10orf82Q8WW14 230 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 CGREF1Q99674 301 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 WFDC6Q9BQY6 131 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 CNFNQ9BYD5 112 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 PSENENQ9NZ42 101 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 CFTRP13569 1480 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 ZCCHC6Q5VYS8 1495 aaKnown RBP0.32□□□□□ -2.36
CHD9-211ENST00000564600 HELZP42694 1942 aaKnown RBP0.32□□□□□ -2.36
CHD9-211ENST00000564600 MAPKBP1O60336 1514 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 CDK13Q14004 1512 aaKnown RBP0.32□□□□□ -2.36
CHD9-211ENST00000564600 POLQO75417 2590 aa0.32□□□□□ -2.36
CHD9-211ENST00000564600 TRPM7Q96QT4 1865 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 ZNF142P52746 1687 aaPredicted RBP0.31□□□□□ -2.36
CHD9-211ENST00000564600 USP9YO00507 2555 aaPredicted RBP0.31□□□□□ -2.36
CHD9-211ENST00000564600 GRIN2AQ12879 1464 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 CCDC141Q6ZP82 1450 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 CDK12Q9NYV4 1490 aaPredicted RBP0.31□□□□□ -2.36
CHD9-211ENST00000564600 CEP152O94986 1710 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 TRGV1A0A0A0MS02 117 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 TRAV1-2A0A0B4J238 106 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 TRAV22A0A0B4J277 110 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 C10orf142B7Z368 130 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 SFT2D2O95562 160 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 MPC2O95563 127 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 SAA2P0DJI9 122 aaPredicted RBP0.31□□□□□ -2.36
CHD9-211ENST00000564600 COX8AP10176 69 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 UBE2D1P51668 147 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 S100A10P60903 97 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 PMCHL1Q16048 86 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 Q5BKY6 102 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 TMEM263Q8WUH6 116 aaKnown RBP0.31□□□□□ -2.36
CHD9-211ENST00000564600 C2orf88Q9BSF0 95 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 NXT2Q9NPJ8 142 aaKnown RBP0.31□□□□□ -2.36
CHD9-211ENST00000564600 MANBALQ9NQG1 85 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 PRO1854Q9UHT4 67 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 MYH9P35579 1960 aaKnown RBP0.31□□□□□ -2.36
CHD9-211ENST00000564600 KNTC1P50748 2209 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 SPAG17Q6Q759 2223 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 DLEC1Q9Y238 1755 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 EPG5Q9HCE0 2579 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 ROCK2O75116 1388 aaKnown RBP0.31□□□□□ -2.36
CHD9-211ENST00000564600 BSNQ9UPA5 3926 aa0.31□□□□□ -2.36
CHD9-211ENST00000564600 MYH13Q9UKX3 1938 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms