RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 Q0VG73 95 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 COTL1Q14019 142 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST2H2BEQ16778 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 IQCJQ1A5X6 159 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.77□□□□□ -0.53
CMTM3-208ENST00000564247 LGALS9CQ6DKI2 356 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 FA2HQ7L5A8 372 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BHQ93079 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BNQ99877 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 HIST1H2BMQ99879 126 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 KMT2AQ03164 3969 aa11.77□□□□□ -0.53
CMTM3-208ENST00000564247 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
CMTM3-208ENST00000564247 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
CMTM3-208ENST00000564247 NIT1Q86X76 327 aa11.76□□□□□ -0.53
CMTM3-208ENST00000564247 K7EMI3 77 aa11.75□□□□□ -0.53
CMTM3-208ENST00000564247 GTSF1LQ9H1H1 148 aa11.75□□□□□ -0.53
CMTM3-208ENST00000564247 APLNQ9ULZ1 77 aa11.75□□□□□ -0.53
CMTM3-208ENST00000564247 LINC00614P0C842 121 aa11.74□□□□□ -0.53
CMTM3-208ENST00000564247 IGLV2-18A0A075B6J9 118 aa11.73□□□□□ -0.53
CMTM3-208ENST00000564247 G0S2P27469 103 aa11.72□□□□□ -0.53
CMTM3-208ENST00000564247 NDUFA6P56556 154 aa11.72□□□□□ -0.53
CMTM3-208ENST00000564247 LAGE3Q14657 143 aa11.72□□□□□ -0.53
CMTM3-208ENST00000564247 ORMDL2Q53FV1 153 aa11.72□□□□□ -0.53
CMTM3-208ENST00000564247 RNASEKQ6P5S7 137 aaKnown RBP11.72□□□□□ -0.53
CMTM3-208ENST00000564247 LYPD5Q6UWN5 251 aa11.72□□□□□ -0.53
CMTM3-208ENST00000564247 DEFB104AQ8WTQ1 72 aa11.72□□□□□ -0.53
CMTM3-208ENST00000564247 CHCHD1Q96BP2 118 aaKnown RBP11.72□□□□□ -0.53
CMTM3-208ENST00000564247 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
CMTM3-208ENST00000564247 DNAH6Q9C0G6 4158 aa11.72□□□□□ -0.53
CMTM3-208ENST00000564247 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.53
CMTM3-208ENST00000564247 IGHV1-24A0A0C4DH33 117 aa11.71□□□□□ -0.53
CMTM3-208ENST00000564247 TSHBP01222 138 aa11.71□□□□□ -0.53
CMTM3-208ENST00000564247 AMTP48728 403 aa11.71□□□□□ -0.53
CMTM3-208ENST00000564247 TIRAPP58753 221 aa11.71□□□□□ -0.53
CMTM3-208ENST00000564247 EPPK1P58107 5090 aaKnown RBP11.71□□□□□ -0.54
CMTM3-208ENST00000564247 TRBV6-8A0A0A6YYG3 113 aa11.7□□□□□ -0.54
CMTM3-208ENST00000564247 S100A6P06703 90 aa11.7□□□□□ -0.54
CMTM3-208ENST00000564247 CCL18P55774 89 aa11.7□□□□□ -0.54
CMTM3-208ENST00000564247 LINC01546A6NGU7 62 aa11.69□□□□□ -0.54
CMTM3-208ENST00000564247 ESRGQ1W209 222 aa11.69□□□□□ -0.54
CMTM3-208ENST00000564247 LELP1Q5T871 98 aa11.69□□□□□ -0.54
CMTM3-208ENST00000564247 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
CMTM3-208ENST00000564247 TRAV8-6A0A0B4J262 113 aa11.68□□□□□ -0.54
CMTM3-208ENST00000564247 HSBP1O75506 76 aa11.68□□□□□ -0.54
CMTM3-208ENST00000564247 SERF1AO75920 110 aa11.68□□□□□ -0.54
CMTM3-208ENST00000564247 NTM-AS1Q6ZSK4 140 aa11.68□□□□□ -0.54
CMTM3-208ENST00000564247 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
CMTM3-208ENST00000564247 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
CMTM3-208ENST00000564247 UBE2L6O14933 153 aa11.67□□□□□ -0.54
CMTM3-208ENST00000564247 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
CMTM3-208ENST00000564247 DNAH10Q8IVF4 4471 aa11.67□□□□□ -0.54
CMTM3-208ENST00000564247 ESDP10768 282 aa11.66□□□□□ -0.54
CMTM3-208ENST00000564247 SMAGPQ0VAQ4 97 aa11.66□□□□□ -0.54
CMTM3-208ENST00000564247 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
CMTM3-208ENST00000564247 LINC01549A6NIU2 74 aa11.65□□□□□ -0.54
CMTM3-208ENST00000564247 H7C423 109 aa11.65□□□□□ -0.54
CMTM3-208ENST00000564247 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
CMTM3-208ENST00000564247 C20orf203Q8NBC4 194 aa11.65□□□□□ -0.54
CMTM3-208ENST00000564247 CHCHD7Q9BUK0 85 aa11.65□□□□□ -0.54
CMTM3-208ENST00000564247 CYSLTR1Q9Y271 337 aa11.65□□□□□ -0.54
CMTM3-208ENST00000564247 TMA7Q9Y2S6 64 aaKnown RBP11.65□□□□□ -0.54
CMTM3-208ENST00000564247 TMEM262E9PQX1 116 aa11.64□□□□□ -0.55
CMTM3-208ENST00000564247 PKIAP61925 76 aa11.64□□□□□ -0.55
CMTM3-208ENST00000564247 UBE2DNLQ8IWF7 75 aa11.64□□□□□ -0.55
CMTM3-208ENST00000564247 FRAS1Q86XX4 4008 aa11.64□□□□□ -0.55
CMTM3-208ENST00000564247 NUPR1O60356 82 aa11.63□□□□□ -0.55
CMTM3-208ENST00000564247 HBDP02042 147 aa11.63□□□□□ -0.55
CMTM3-208ENST00000564247 AMMECR1LQ6DCA0 310 aa11.63□□□□□ -0.55
CMTM3-208ENST00000564247 C2orf66Q6UXQ4 117 aa11.63□□□□□ -0.55
CMTM3-208ENST00000564247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-208ENST00000564247 IGKV2-29A2NJV5 120 aaPredicted RBP11.62□□□□□ -0.55
CMTM3-208ENST00000564247 LINC00310P59036 64 aa11.62□□□□□ -0.55
CMTM3-208ENST00000564247 GAGE6Q13070 117 aa11.62□□□□□ -0.55
CMTM3-208ENST00000564247 DGAT2L7PQ6IED9 249 aa11.62□□□□□ -0.55
CMTM3-208ENST00000564247 MRPS16Q9Y3D3 137 aaKnown RBP11.62□□□□□ -0.55
CMTM3-208ENST00000564247 LINC00588Q9Y4M8 146 aa11.62□□□□□ -0.55
CMTM3-208ENST00000564247 PMCHL1Q16048 86 aa11.61□□□□□ -0.55
CMTM3-208ENST00000564247 FAM19A2Q8N3H0 131 aa11.61□□□□□ -0.55
CMTM3-208ENST00000564247 TOMM6Q96B49 74 aa11.61□□□□□ -0.55
CMTM3-208ENST00000564247 TMEM101Q96IK0 257 aa11.61□□□□□ -0.55
CMTM3-208ENST00000564247 A0A087WX48 190 aa11.6□□□□□ -0.55
CMTM3-208ENST00000564247 SNRPEP62304 92 aaKnown RBP11.6□□□□□ -0.55
CMTM3-208ENST00000564247 RPL39P62891 51 aaKnown RBP11.6□□□□□ -0.55
CMTM3-208ENST00000564247 FGF6P10767 208 aa11.59□□□□□ -0.55
CMTM3-208ENST00000564247 S100A2P29034 98 aa11.59□□□□□ -0.55
CMTM3-208ENST00000564247 SCGB3A1Q96QR1 104 aa11.59□□□□□ -0.55
CMTM3-208ENST00000564247 BIRC6Q9NR09 4857 aa11.58□□□□□ -0.56
CMTM3-208ENST00000564247 ZNF25P17030 456 aaPredicted RBP11.58□□□□□ -0.56
CMTM3-208ENST00000564247 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
CMTM3-208ENST00000564247 TIMM21Q9BVV7 248 aa11.58□□□□□ -0.56
CMTM3-208ENST00000564247 SPANXA1Q9NS26 97 aa11.58□□□□□ -0.56
CMTM3-208ENST00000564247 PYGO1Q9Y3Y4 419 aa11.58□□□□□ -0.56
CMTM3-208ENST00000564247 DNAH2Q9P225 4427 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 A0A096LNJ9 63 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 A0A1B0GUV1 79 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 SIVA1O15304 175 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 LEPROTL1O95214 131 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 PDZD11Q5EBL8 140 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 ERASQ7Z444 233 aa11.57□□□□□ -0.56
CMTM3-208ENST00000564247 MRPL52Q86TS9 123 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms