RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 IFI27L1Q96BM0 104 aa6.93□□□□□ -1.3
UBFD1-203ENST00000564106 KMT2AQ03164 3969 aa6.93□□□□□ -1.3
UBFD1-203ENST00000564106 TRBV6-4A0A1B0GX49 114 aa6.92□□□□□ -1.3
UBFD1-203ENST00000564106 TSTD3H0UI37 97 aa6.92□□□□□ -1.3
UBFD1-203ENST00000564106 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.92□□□□□ -1.3
UBFD1-203ENST00000564106 TEX43Q6ZNM6 134 aa6.92□□□□□ -1.3
UBFD1-203ENST00000564106 TOMM6Q96B49 74 aa6.92□□□□□ -1.3
UBFD1-203ENST00000564106 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
UBFD1-203ENST00000564106 TRBV7-3A0A075B6L6 115 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 TRGV4A0A0C4DH28 118 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 EMP1P54849 157 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 LGALS9CQ6DKI2 356 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 C2orf66Q6UXQ4 117 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 Q6ZN92 141 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 ERASQ7Z444 233 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 ZNF479Q96JC4 524 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
UBFD1-203ENST00000564106 IGHV4-28A0A0C4DH34 117 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 NPSP0C0P6 89 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 SPART-AS1P0CW21 52 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 SMAGPQ0VAQ4 97 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 COTL1Q14019 142 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 DAZ4Q86SG3 579 aaKnown RBP6.9□□□□□ -1.3
UBFD1-203ENST00000564106 Q8NAQ8 132 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 NEXN-AS1Q8NBZ9 246 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
UBFD1-203ENST00000564106 DAZ3Q9NR90 486 aaKnown RBP6.9□□□□□ -1.3
UBFD1-203ENST00000564106 A0A0J9YWU9 116 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 HSBP1L1C9JCN9 74 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 TSHBP01222 138 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 PRSS1P07477 247 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 DEFB130BP0DP73 79 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 DEFB130AP0DP74 79 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 PKIAP61925 76 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 TMEM97Q5BJF2 176 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 FAM222AQ5U5X8 452 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 LINC00173Q6ZV60 143 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 Q8N976 141 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 DKK2Q9UBU2 259 aa6.89□□□□□ -1.31
UBFD1-203ENST00000564106 TRAV12-1A0A0B4J245 112 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 H0Y8G0 127 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 P0DMU3 169 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 FAM231AP0DMU4 169 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 FAM231CP0DMU5 169 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 DAD1P61803 113 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 Q6ZSN1 163 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 NEGR1Q7Z3B1 354 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 C20orf203Q8NBC4 194 aa6.88□□□□□ -1.31
UBFD1-203ENST00000564106 TRAV9-2A0A087WT02 112 aa6.87□□□□□ -1.31
UBFD1-203ENST00000564106 ATP5G1P05496 136 aa6.87□□□□□ -1.31
UBFD1-203ENST00000564106 CRYBA4P53673 196 aa6.87□□□□□ -1.31
UBFD1-203ENST00000564106 FHL2Q14192 279 aa6.87□□□□□ -1.31
UBFD1-203ENST00000564106 ZNRF2Q8NHG8 242 aa6.87□□□□□ -1.31
UBFD1-203ENST00000564106 C11orf68Q9H3H3 251 aaKnown RBP6.87□□□□□ -1.31
UBFD1-203ENST00000564106 PRO0255Q9UI72 69 aa6.87□□□□□ -1.31
UBFD1-203ENST00000564106 PLNP26678 52 aa6.86□□□□□ -1.31
UBFD1-203ENST00000564106 UBE2D3P61077 147 aa6.86□□□□□ -1.31
UBFD1-203ENST00000564106 UBE2D2P62837 147 aa6.86□□□□□ -1.31
UBFD1-203ENST00000564106 CDPF1Q6NVV7 123 aa6.86□□□□□ -1.31
UBFD1-203ENST00000564106 GTSF1LQ9H1H1 148 aa6.86□□□□□ -1.31
UBFD1-203ENST00000564106 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
UBFD1-203ENST00000564106 HHLA3Q9XRX5 114 aa6.86□□□□□ -1.31
UBFD1-203ENST00000564106 PYGO1Q9Y3Y4 419 aa6.86□□□□□ -1.31
UBFD1-203ENST00000564106 A0A087WX48 190 aa6.85□□□□□ -1.31
UBFD1-203ENST00000564106 IGIPA6NJ69 53 aa6.85□□□□□ -1.31
UBFD1-203ENST00000564106 DPM2O94777 84 aa6.85□□□□□ -1.31
UBFD1-203ENST00000564106 ODF1Q14990 250 aa6.85□□□□□ -1.31
UBFD1-203ENST00000564106 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
UBFD1-203ENST00000564106 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
UBFD1-203ENST00000564106 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
UBFD1-203ENST00000564106 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 F8VRH5 84 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 H7C423 109 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 IGKCP01834 107 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 GAGE1Q13065 139 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 GAGE4Q13068 117 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 GAGE5Q13069 117 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 PMVKQ15126 192 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 SH2D6Q7Z4S9 175 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 ZNF664Q8N3J9 261 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 BAALCQ8WXS3 180 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
UBFD1-203ENST00000564106 TRBV25-1A0A075B6N4 114 aa6.83□□□□□ -1.32
UBFD1-203ENST00000564106 PCP4L1A6NKN8 68 aa6.83□□□□□ -1.32
UBFD1-203ENST00000564106 DEFB4AO15263 64 aa6.83□□□□□ -1.32
UBFD1-203ENST00000564106 PAX4O43316 350 aa6.83□□□□□ -1.32
UBFD1-203ENST00000564106 RPL39P62891 51 aaKnown RBP6.83□□□□□ -1.32
UBFD1-203ENST00000564106 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
UBFD1-203ENST00000564106 PHLDA1Q8WV24 401 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-203ENST00000564106 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
UBFD1-203ENST00000564106 HERC2O95714 4834 aa6.82□□□□□ -1.32
UBFD1-203ENST00000564106 DNAH2Q9P225 4427 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms