RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 MAP1AP78559 2803 aaPredicted RBP9.11□□□□□ -0.95
SCAMP2-204ENST00000563829 ANKHD1Q8IWZ3 2542 aaKnown RBP9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 IGHV3-73A0A0B4J1V6 119 aa9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 SOCS3O14543 225 aa9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 SORL1Q92673 2214 aa9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 TRAV12-2A0A075B6T6 113 aa9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 MRPS36P82909 103 aaKnown RBP9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 MINOS1Q5TGZ0 78 aa9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 DSCR8Q96T75 97 aa9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 Q8N2B8 174 aa9.1□□□□□ -0.95
SCAMP2-204ENST00000563829 COL6A6A6NMZ7 2263 aa9.09□□□□□ -0.95
SCAMP2-204ENST00000563829 COX7A2LO14548 114 aa9.09□□□□□ -0.95
SCAMP2-204ENST00000563829 LINC01560Q8TB33 94 aa9.09□□□□□ -0.95
SCAMP2-204ENST00000563829 PEMTQ9UBM1 199 aa9.09□□□□□ -0.95
SCAMP2-204ENST00000563829 COL12A1Q99715 3063 aa9.09□□□□□ -0.95
SCAMP2-204ENST00000563829 ATOX1O00244 68 aa9.09□□□□□ -0.95
SCAMP2-204ENST00000563829 IGHV3-11P01762 117 aa9.09□□□□□ -0.95
SCAMP2-204ENST00000563829 CXCL5P42830 114 aa9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 RPS28P62857 69 aaKnown RBP9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 C4orf26Q17RF5 130 aa9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 KLK9Q9UKQ9 250 aa9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 ANKRD11Q6UB99 2663 aaPredicted RBP9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 IGKV3D-7A0A0C4DH55 119 aa9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 APRG1Q8IVJ8 170 aa9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 DPH3Q96FX2 82 aa9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 Q9HAA7 133 aa9.08□□□□□ -0.96
SCAMP2-204ENST00000563829 KLLNB2CW77 178 aa9.07□□□□□ -0.96
SCAMP2-204ENST00000563829 FAM104AQ969W3 186 aa9.07□□□□□ -0.96
SCAMP2-204ENST00000563829 HOXD3P31249 432 aaPredicted RBP9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 HRCT1Q6UXD1 115 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 AKAP13Q12802 2813 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 A0A087WVE0 104 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 IGHV3-16A0A0C4DH30 117 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 HTN1P15515 57 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 RNF152Q8N8N0 203 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 MINOS1-NBL1R4GNA1 71 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 PTPRQQ9UMZ3 2332 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 LINC00308Q8TCZ7 52 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 RHPN1-AS1Q9BWJ2 59 aa9.06□□□□□ -0.96
SCAMP2-204ENST00000563829 OXTP01178 125 aa9.05□□□□□ -0.96
SCAMP2-204ENST00000563829 PROK1P58294 105 aa9.05□□□□□ -0.96
SCAMP2-204ENST00000563829 FAM218AQ96MZ4 157 aa9.05□□□□□ -0.96
SCAMP2-204ENST00000563829 CDKN2A-AS1Q9UH64 79 aa9.05□□□□□ -0.96
SCAMP2-204ENST00000563829 ZFP36P26651 326 aaKnown RBP9.05□□□□□ -0.96
SCAMP2-204ENST00000563829 IGFL3Q6UXB1 125 aa9.05□□□□□ -0.96
SCAMP2-204ENST00000563829 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 IGKV2-29A2NJV5 120 aaPredicted RBP9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 WIPF1O43516 503 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 EDN2P20800 178 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 RPL18AQ02543 176 aaKnown RBP9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 SAA4P35542 130 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 Q9H8V8 135 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 C22orf24Q9Y442 160 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 CELSR1Q9NYQ6 3014 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 IGHV3OR16-10A0A075B7F0 116 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 TINCRA0A1B0GVN0 87 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 C9orf85Q96MD7 179 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 Q9UF83 564 aa9.04□□□□□ -0.96
SCAMP2-204ENST00000563829 BSNQ9UPA5 3926 aa9.03□□□□□ -0.96
SCAMP2-204ENST00000563829 F5H768 121 aa9.03□□□□□ -0.96
SCAMP2-204ENST00000563829 HIST1H4AP62805 103 aaKnown RBP9.03□□□□□ -0.96
SCAMP2-204ENST00000563829 PLA2G2CQ5R387 149 aa9.03□□□□□ -0.96
SCAMP2-204ENST00000563829 PYGO1Q9Y3Y4 419 aa9.03□□□□□ -0.96
SCAMP2-204ENST00000563829 DNAL4O96015 105 aa9.03□□□□□ -0.96
SCAMP2-204ENST00000563829 TMEM258P61165 79 aa9.03□□□□□ -0.96
SCAMP2-204ENST00000563829 DEFB124Q8NES8 71 aa9.03□□□□□ -0.96
SCAMP2-204ENST00000563829 NDUFA4O00483 81 aa9.02□□□□□ -0.96
SCAMP2-204ENST00000563829 BEAN1Q3B7T3 259 aa9.02□□□□□ -0.96
SCAMP2-204ENST00000563829 KNCNA6PVL3 124 aa9.02□□□□□ -0.97
SCAMP2-204ENST00000563829 TIMM17BO60830 172 aa9.02□□□□□ -0.97
SCAMP2-204ENST00000563829 IGHG2P01859 326 aa9.02□□□□□ -0.97
SCAMP2-204ENST00000563829 SPINK13Q1W4C9 94 aa9.02□□□□□ -0.97
SCAMP2-204ENST00000563829 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.97
SCAMP2-204ENST00000563829 C14orf132Q9NPU4 83 aa9.02□□□□□ -0.97
SCAMP2-204ENST00000563829 GRNP28799 593 aaKnown RBP9.01□□□□□ -0.97
SCAMP2-204ENST00000563829 IGHV3-38A0A0C4DH36 116 aa9.01□□□□□ -0.97
SCAMP2-204ENST00000563829 MALP21145 153 aa9.01□□□□□ -0.97
SCAMP2-204ENST00000563829 KLK9Q2XQG4 91 aa9.01□□□□□ -0.97
SCAMP2-204ENST00000563829 SERP2Q8N6R1 65 aa9.01□□□□□ -0.97
SCAMP2-204ENST00000563829 FAM223BA6NKX1 122 aa9□□□□□ -0.97
SCAMP2-204ENST00000563829 NDUFA1O15239 70 aa9□□□□□ -0.97
SCAMP2-204ENST00000563829 PRIMA1Q86XR5 153 aa9□□□□□ -0.97
SCAMP2-204ENST00000563829 FAM223AQ8IWN6 122 aa9□□□□□ -0.97
SCAMP2-204ENST00000563829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9□□□□□ -0.97
SCAMP2-204ENST00000563829 C5orf56Q8N8D9 126 aa9□□□□□ -0.97
SCAMP2-204ENST00000563829 CREBBPQ92793 2442 aa9□□□□□ -0.97
SCAMP2-204ENST00000563829 C9orf129Q5T035 196 aaKnown RBP9□□□□□ -0.97
SCAMP2-204ENST00000563829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9□□□□□ -0.972e-6■■■□□ 16.1
SCAMP2-204ENST00000563829 IGHV1OR15-1A0A075B7D0 117 aa9□□□□□ -0.97
SCAMP2-204ENST00000563829 UBE2D4Q9Y2X8 147 aa8.99□□□□□ -0.97
SCAMP2-204ENST00000563829 DOPEY2Q9Y3R5 2298 aa8.99□□□□□ -0.97
SCAMP2-204ENST00000563829 PIK3CD-AS1Q5SR53 167 aa8.99□□□□□ -0.97
SCAMP2-204ENST00000563829 C10orf105Q8TEF2 133 aa8.99□□□□□ -0.97
SCAMP2-204ENST00000563829 SYNJ2BPP57105 145 aa8.98□□□□□ -0.97
SCAMP2-204ENST00000563829 COX6A2Q02221 97 aa8.98□□□□□ -0.97
SCAMP2-204ENST00000563829 LINC00846Q9NV44 126 aa8.98□□□□□ -0.97
SCAMP2-204ENST00000563829 ATRXP46100 2492 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms