RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SCGB1C1Q8TD33 95 aa5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 RPL36ALQ969Q0 106 aaKnown RBP5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 CCDC32Q9BV29 185 aa5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 K7EQM0 130 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 M0R036 132 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 SH2D1AO60880 128 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 PTTG1O95997 202 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 RPS10P46783 165 aaKnown RBP5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 IFITM3Q01628 133 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 ZNF726P1Q15940 193 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 ZNF674Q2M3X9 581 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 KCNIP4Q6PIL6 250 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 CLPSL2Q6UWE3 100 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 LINC00269Q8N2A0 174 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 GFRA4Q9GZZ7 299 aa5.97□□□□□ -1.45
HDGFL3-204ENST00000563790 A0A1W2PRE2 83 aa5.96□□□□□ -1.46
HDGFL3-204ENST00000563790 TMEM262E9PQX1 116 aa5.96□□□□□ -1.46
HDGFL3-204ENST00000563790 M0R381 172 aa5.96□□□□□ -1.46
HDGFL3-204ENST00000563790 C20orf203Q8NBC4 194 aa5.96□□□□□ -1.46
HDGFL3-204ENST00000563790 RAB4BP61018 213 aa5.95□□□□□ -1.46
HDGFL3-204ENST00000563790 TYMSOSQ8TAI1 123 aa5.95□□□□□ -1.46
HDGFL3-204ENST00000563790 CHCHD5Q9BSY4 110 aa5.95□□□□□ -1.46
HDGFL3-204ENST00000563790 PSMG3Q9BT73 122 aaPredicted RBP5.95□□□□□ -1.46
HDGFL3-204ENST00000563790 PHLDA3Q9Y5J5 127 aa5.95□□□□□ -1.46
HDGFL3-204ENST00000563790 A0A087X002 238 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 PEX7O00628 323 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 CXorf1O96002 111 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 ATP6V0CP27449 155 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 IQCJQ1A5X6 159 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 ZFP82Q8N141 532 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 C15orf56Q8N910 161 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 OR10AG1Q8NH19 301 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 MARVELD1Q9BSK0 173 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 TMEM167BQ9NRX6 74 aa5.94□□□□□ -1.46
HDGFL3-204ENST00000563790 IGLV4-60A0A075B6I1 120 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 TMSB15BA0A087X1C1 80 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 TRBV6-1A0A0K0K1D8 114 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 FAM74A7A6NL05 159 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 TSHBP01222 138 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 LTAP01374 205 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 TPT1P13693 172 aaKnown RBP5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 REG3AQ06141 175 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 GAGE6Q13070 117 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 MZT2BQ6NZ67 158 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 COX6B2Q6YFQ2 88 aa5.93□□□□□ -1.46
HDGFL3-204ENST00000563790 INMT-MINDY4F8WBC2 141 aa5.92□□□□□ -1.46
HDGFL3-204ENST00000563790 SNAI2O43623 268 aa5.92□□□□□ -1.46
HDGFL3-204ENST00000563790 PET100P0DJ07 73 aa5.92□□□□□ -1.46
HDGFL3-204ENST00000563790 PKIAP61925 76 aa5.92□□□□□ -1.46
HDGFL3-204ENST00000563790 CTAG1AP78358 180 aa5.92□□□□□ -1.46
HDGFL3-204ENST00000563790 SERF2P84101 59 aa5.92□□□□□ -1.46
HDGFL3-204ENST00000563790 TNFSF18Q9UNG2 199 aa5.92□□□□□ -1.46
HDGFL3-204ENST00000563790 ZFP30Q9Y2G7 519 aa5.92□□□□□ -1.46
HDGFL3-204ENST00000563790 A0A1B0GUV1 79 aa5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 CXCL1P09341 107 aa5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 AMTP48728 403 aa5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 UBE2G2P60604 165 aa5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 EIF5AP63241 154 aaKnown RBP5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 HIST1H2BAQ96A08 127 aa5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 AQP10Q96PS8 301 aa5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 ZNF471Q9BX82 626 aaPredicted RBP5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 NDUFA13Q9P0J0 144 aa5.91□□□□□ -1.46
HDGFL3-204ENST00000563790 TRAV8-4A0A0B4J246 113 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 A0A1B0GVG6 124 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 M0QY20 66 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 UPK1BO75841 260 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 P01737 135 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 ZNF56Q15929 161 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 LINC00299Q6ZSB3 139 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 LINC00304Q8N9R0 145 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 ENKURQ8TC29 256 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 TSKUQ8WUA8 353 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 DERL1Q9BUN8 251 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 ACTR3CQ9C0K3 210 aaPredicted RBP5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 PKIGQ9Y2B9 76 aa5.9□□□□□ -1.46
HDGFL3-204ENST00000563790 TRBV25-1A0A075B6N4 114 aa5.89□□□□□ -1.47
HDGFL3-204ENST00000563790 MUC21A0A140T8X8 626 aa5.89□□□□□ -1.47
HDGFL3-204ENST00000563790 TNFRSF6BO95407 300 aa5.89□□□□□ -1.47
HDGFL3-204ENST00000563790 MBP02144 154 aa5.89□□□□□ -1.47
HDGFL3-204ENST00000563790 OR5AL1P0C617 328 aa5.89□□□□□ -1.47
HDGFL3-204ENST00000563790 TMEM97Q5BJF2 176 aa5.89□□□□□ -1.47
HDGFL3-204ENST00000563790 Q5BKY6 102 aa5.89□□□□□ -1.47
HDGFL3-204ENST00000563790 FMC1Q96HJ9 113 aa5.89□□□□□ -1.47
HDGFL3-204ENST00000563790 CTXND1A0A1B0GTU2 59 aa5.88□□□□□ -1.47
HDGFL3-204ENST00000563790 GZMBP10144 247 aa5.88□□□□□ -1.47
HDGFL3-204ENST00000563790 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
HDGFL3-204ENST00000563790 IGLV8-61A0A075B6I0 122 aa5.87□□□□□ -1.47
HDGFL3-204ENST00000563790 IGHV1-24A0A0C4DH33 117 aa5.87□□□□□ -1.47
HDGFL3-204ENST00000563790 A0A1W2PNN7 141 aa5.87□□□□□ -1.47
HDGFL3-204ENST00000563790 SSNA1O43805 119 aa5.87□□□□□ -1.47
HDGFL3-204ENST00000563790 RAB5CP51148 216 aa5.87□□□□□ -1.47
HDGFL3-204ENST00000563790 RPL7L1Q6DKI1 246 aaKnown RBP5.87□□□□□ -1.47
HDGFL3-204ENST00000563790 NKX6-2Q9C056 277 aaPredicted RBP5.87□□□□□ -1.47
HDGFL3-204ENST00000563790 GVQW2A0A096LPI5 108 aaPredicted RBP5.86□□□□□ -1.47
HDGFL3-204ENST00000563790 FHITP49789 147 aa5.86□□□□□ -1.47
HDGFL3-204ENST00000563790 DEFA3P59666 94 aa5.86□□□□□ -1.47
HDGFL3-204ENST00000563790 KIR2DL4Q99706 377 aa5.86□□□□□ -1.47
HDGFL3-204ENST00000563790 GAGE12HA6NDE8 117 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms