RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 C9orf163Q8N9P6 203 aa16.31■□□□□ 0.2
SPG7-208ENST00000563783 C20orf203Q8NBC4 194 aa16.31■□□□□ 0.2
SPG7-208ENST00000563783 COTL1Q14019 142 aa16.3■□□□□ 0.2
SPG7-208ENST00000563783 TWIST1Q15672 202 aa16.3■□□□□ 0.2
SPG7-208ENST00000563783 TEX261Q6UWH6 196 aa16.3■□□□□ 0.2
SPG7-208ENST00000563783 FAM231DQ6ZW35 169 aa16.29■□□□□ 0.2
SPG7-208ENST00000563783 RNASE7Q9H1E1 156 aaKnown RBP16.29■□□□□ 0.2
SPG7-208ENST00000563783 CLPSL2Q6UWE3 100 aa16.28■□□□□ 0.2
SPG7-208ENST00000563783 SMIM15Q7Z3B0 74 aa16.28■□□□□ 0.2
SPG7-208ENST00000563783 KRTAP29-1A8MX34 341 aaPredicted RBP16.27■□□□□ 0.2
SPG7-208ENST00000563783 UBE2L6O14933 153 aa16.27■□□□□ 0.2
SPG7-208ENST00000563783 CNBPP62633 177 aaKnown RBP16.27■□□□□ 0.2
SPG7-208ENST00000563783 CT83Q5H943 113 aa16.27■□□□□ 0.2
SPG7-208ENST00000563783 NCR2O95944 276 aa16.26■□□□□ 0.19
SPG7-208ENST00000563783 AMTP48728 403 aa16.26■□□□□ 0.19
SPG7-208ENST00000563783 KRTAP10-4P60372 401 aaPredicted RBP16.26■□□□□ 0.19
SPG7-208ENST00000563783 GTSF1Q8WW33 167 aa16.26■□□□□ 0.19
SPG7-208ENST00000563783 IGLV4-60A0A075B6I1 120 aa16.25■□□□□ 0.19
SPG7-208ENST00000563783 A8MWL6 223 aa16.25■□□□□ 0.19
SPG7-208ENST00000563783 GATD1Q8NB37 220 aa16.25■□□□□ 0.19
SPG7-208ENST00000563783 H7C423 109 aa16.24■□□□□ 0.19
SPG7-208ENST00000563783 J3QL48 77 aa16.24■□□□□ 0.19
SPG7-208ENST00000563783 FOXA3P55318 350 aaPredicted RBP16.24■□□□□ 0.19
SPG7-208ENST00000563783 ALKAL2Q6UX46 152 aa16.24■□□□□ 0.19
SPG7-208ENST00000563783 FAM210AQ96ND0 272 aa16.24■□□□□ 0.19
SPG7-208ENST00000563783 IGLV10-54A0A075B6I4 117 aa16.22■□□□□ 0.19
SPG7-208ENST00000563783 GATCO43716 136 aaKnown RBP16.22■□□□□ 0.19
SPG7-208ENST00000563783 GFRA4Q9GZZ7 299 aa16.21■□□□□ 0.19
SPG7-208ENST00000563783 SDIM1Q6ZPB5 146 aa16.2■□□□□ 0.18
SPG7-208ENST00000563783 FAM231BA6NCW3 169 aa16.19■□□□□ 0.18
SPG7-208ENST00000563783 CIRBPQ14011 172 aaKnown RBP16.19■□□□□ 0.18
SPG7-208ENST00000563783 AP5S1Q9NUS5 200 aa16.19■□□□□ 0.18
SPG7-208ENST00000563783 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.18■□□□□ 0.18
SPG7-208ENST00000563783 TRAV26-2A0A0B4J265 109 aa16.18■□□□□ 0.18
SPG7-208ENST00000563783 TRBV6-5A0A0K0K1A5 114 aa16.18■□□□□ 0.18
SPG7-208ENST00000563783 hDV102S1A0JD36 115 aa16.17■□□□□ 0.18
SPG7-208ENST00000563783 SDHAF1A6NFY7 115 aa16.16■□□□□ 0.18
SPG7-208ENST00000563783 APCSP02743 223 aa16.16■□□□□ 0.18
SPG7-208ENST00000563783 CFAP161Q6P656 301 aa16.16■□□□□ 0.18
SPG7-208ENST00000563783 BORCS7Q96B45 105 aa16.16■□□□□ 0.18
SPG7-208ENST00000563783 SMIM7Q9BQ49 75 aa16.16■□□□□ 0.18
SPG7-208ENST00000563783 OXTP01178 125 aa16.15■□□□□ 0.18
SPG7-208ENST00000563783 ZNF25P17030 456 aaPredicted RBP16.15■□□□□ 0.18
SPG7-208ENST00000563783 AMMECR1LQ6DCA0 310 aa16.15■□□□□ 0.18
SPG7-208ENST00000563783 RPL39LQ96EH5 51 aaKnown RBP16.15■□□□□ 0.18
SPG7-208ENST00000563783 RNF185Q96GF1 192 aa16.15■□□□□ 0.18
SPG7-208ENST00000563783 LINC01551Q86U37 167 aa16.14■□□□□ 0.17
SPG7-208ENST00000563783 TSKUQ8WUA8 353 aa16.14■□□□□ 0.17
SPG7-208ENST00000563783 OSTCQ9NRP0 149 aa16.14■□□□□ 0.17
SPG7-208ENST00000563783 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.14■□□□□ 0.17
SPG7-208ENST00000563783 IGHV3-64A0A075B6Q5 118 aa16.13■□□□□ 0.17
SPG7-208ENST00000563783 A0A1B0GUT8 65 aa16.13■□□□□ 0.17
SPG7-208ENST00000563783 I3L3M4 83 aa16.13■□□□□ 0.17
SPG7-208ENST00000563783 RPL37AP61513 92 aaKnown RBP16.13■□□□□ 0.17
SPG7-208ENST00000563783 EIF5A2Q9GZV4 153 aaKnown RBP16.13■□□□□ 0.17
SPG7-208ENST00000563783 TMEM191AQ9H0A3 160 aa16.13■□□□□ 0.17
SPG7-208ENST00000563783 hCG_2014768A0A024R1R8 64 aa16.11■□□□□ 0.17
SPG7-208ENST00000563783 HIGD1CA8MV81 97 aa16.11■□□□□ 0.17
SPG7-208ENST00000563783 FGF6P10767 208 aa16.11■□□□□ 0.17
SPG7-208ENST00000563783 CEBPGP53567 150 aa16.1■□□□□ 0.17
SPG7-208ENST00000563783 C15orf56Q8N910 161 aa16.1■□□□□ 0.17
SPG7-208ENST00000563783 ZNF727A8MUV8 499 aa16.09■□□□□ 0.17
SPG7-208ENST00000563783 MRAP2Q96G30 205 aa16.09■□□□□ 0.17
SPG7-208ENST00000563783 GAGE12HA6NDE8 117 aa16.08■□□□□ 0.16
SPG7-208ENST00000563783 SLPIP03973 132 aa16.08■□□□□ 0.16
SPG7-208ENST00000563783 ESDP10768 282 aa16.08■□□□□ 0.16
SPG7-208ENST00000563783 PMCHP20382 165 aa16.08■□□□□ 0.16
SPG7-208ENST00000563783 RNASEKQ6P5S7 137 aaKnown RBP16.08■□□□□ 0.16
SPG7-208ENST00000563783 CHCHD10Q8WYQ3 142 aaPredicted RBP16.08■□□□□ 0.16
SPG7-208ENST00000563783 ST20Q9HBF5 79 aa16.08■□□□□ 0.16
SPG7-208ENST00000563783 TRBV27A0A0K0K1C4 114 aa16.07■□□□□ 0.16
SPG7-208ENST00000563783 PANO1I0J062 215 aa16.07■□□□□ 0.16
SPG7-208ENST00000563783 SRP19P09132 144 aaKnown RBP16.07■□□□□ 0.16
SPG7-208ENST00000563783 OR5A1Q8NGJ0 315 aa16.07■□□□□ 0.16
SPG7-208ENST00000563783 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.06■□□□□ 0.16
SPG7-208ENST00000563783 IGKV2-29A2NJV5 120 aaPredicted RBP16.06■□□□□ 0.16
SPG7-208ENST00000563783 POLR2KP53803 58 aaKnown RBP16.06■□□□□ 0.16
SPG7-208ENST00000563783 FAM74A3Q4VXF1 159 aa16.06■□□□□ 0.16
SPG7-208ENST00000563783 BTF3L4Q96K17 158 aa16.06■□□□□ 0.16
SPG7-208ENST00000563783 GVQW2A0A096LPI5 108 aaPredicted RBP16.05■□□□□ 0.16
SPG7-208ENST00000563783 PPP1R17O96001 155 aa16.05■□□□□ 0.16
SPG7-208ENST00000563783 MRPL52Q86TS9 123 aaKnown RBP16.05■□□□□ 0.16
SPG7-208ENST00000563783 TMEM101Q96IK0 257 aa16.05■□□□□ 0.16
SPG7-208ENST00000563783 TSHBP01222 138 aa16.04■□□□□ 0.16
SPG7-208ENST00000563783 RPS10P46783 165 aaKnown RBP16.04■□□□□ 0.16
SPG7-208ENST00000563783 SPACA4Q8TDM5 124 aa16.04■□□□□ 0.16
SPG7-208ENST00000563783 RAB4AP20338 218 aa16.03■□□□□ 0.16
SPG7-208ENST00000563783 V9GYV3 84 aa16.03■□□□□ 0.16
SPG7-208ENST00000563783 IGKV3OR2-268A0A0C4DH90 116 aa16.02■□□□□ 0.16
SPG7-208ENST00000563783 RIGQ13278 110 aa16.02■□□□□ 0.16
SPG7-208ENST00000563783 FOXI1Q12951 378 aa16.01■□□□□ 0.15
SPG7-208ENST00000563783 SERTAD4-AS1Q5TG53 156 aa16.01■□□□□ 0.15
SPG7-208ENST00000563783 ISOC2Q96AB3 205 aa16.01■□□□□ 0.15
SPG7-208ENST00000563783 PLAC8Q9NZF1 115 aa16.01■□□□□ 0.15
SPG7-208ENST00000563783 PKIGQ9Y2B9 76 aa16.01■□□□□ 0.15
SPG7-208ENST00000563783 A0A087WYN8 130 aa16■□□□□ 0.15
SPG7-208ENST00000563783 TMEM241Q24JQ0 296 aa16■□□□□ 0.15
SPG7-208ENST00000563783 TMEM242Q9NWH2 141 aa16■□□□□ 0.15
SPG7-208ENST00000563783 C7orf77A4D0Y5 90 aa15.99■□□□□ 0.15
SPG7-208ENST00000563783 GAS8-AS1O95177 125 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms