RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 FBN2P35556 2912 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 LOC107984640A0A0U1RRK4 108 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 LGALS9O00182 355 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 EDN2P20800 178 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 FBXL19-AS1Q494R0 122 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 C9orf47Q6ZRZ4 202 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 TMEM263Q8WUH6 116 aaKnown RBP9.54□□□□□ -0.88
CCDC187-201ENST00000563590 IGHV4-4A0A075B6R2 117 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 CSMD2Q7Z408 3487 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 TEX15Q9BXT5 2789 aa9.54□□□□□ -0.88
CCDC187-201ENST00000563590 ODF3BA8MYP8 253 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 OVOL1O14753 267 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 LEPROTO15243 131 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 DEFB136Q30KP8 78 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 Q8N9W7 124 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 FAM110DQ8TAY7 271 aaPredicted RBP9.53□□□□□ -0.88
CCDC187-201ENST00000563590 IGHV3-38A0A0C4DH36 116 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 A0A0J9YXY3 114 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 PRM2P04554 102 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 ZFAND2AQ8N6M9 145 aa9.53□□□□□ -0.88
CCDC187-201ENST00000563590 BBC3Q96PG8 261 aaPredicted RBP9.53□□□□□ -0.88
CCDC187-201ENST00000563590 FLNAP21333 2647 aaKnown RBP9.53□□□□□ -0.88
CCDC187-201ENST00000563590 LINC00694P0DN24 101 aa9.52□□□□□ -0.88
CCDC187-201ENST00000563590 H7C423 109 aa9.52□□□□□ -0.89
CCDC187-201ENST00000563590 IGHV3-30-3P0DP02 117 aa9.52□□□□□ -0.89
CCDC187-201ENST00000563590 Q8N6K4 173 aa9.52□□□□□ -0.89
CCDC187-201ENST00000563590 RHPN1-AS1Q9BWJ2 59 aa9.52□□□□□ -0.89
CCDC187-201ENST00000563590 NBEAL2Q6ZNJ1 2754 aa9.52□□□□□ -0.89
CCDC187-201ENST00000563590 TRAV13-1A0A0B4J241 112 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 IGIPA6NJ69 53 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 P0DMU3 169 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 FAM231AP0DMU4 169 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 FAM231CP0DMU5 169 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 HOXD3P31249 432 aaPredicted RBP9.51□□□□□ -0.89
CCDC187-201ENST00000563590 SPINK13Q1W4C9 94 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 MDFICQ9P1T7 246 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 BSNQ9UPA5 3926 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 IGHV1-69DA0A0B4J2H0 117 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 RNASE3P12724 160 aaKnown RBP9.51□□□□□ -0.89
CCDC187-201ENST00000563590 TNFRSF18Q9Y5U5 241 aa9.51□□□□□ -0.89
CCDC187-201ENST00000563590 GPHB5Q86YW7 130 aa9.5□□□□□ -0.89
CCDC187-201ENST00000563590 IGHV4-30-2A0A087WSY4 118 aa9.5□□□□□ -0.89
CCDC187-201ENST00000563590 CENPVL3A0A0U1RRI6 287 aa9.5□□□□□ -0.89
CCDC187-201ENST00000563590 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
CCDC187-201ENST00000563590 M0R1W7 72 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 PIMREGQ9BSJ6 248 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 I3L3M4 83 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 VPREB3Q9UKI3 123 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 ITPR3Q14573 2671 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 CELSR2Q9HCU4 2923 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 TRBV7-1A0A0A6YYK4 115 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 A0A0B4J2C4 111 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
CCDC187-201ENST00000563590 TIMM17AQ99595 171 aa9.49□□□□□ -0.89
CCDC187-201ENST00000563590 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.48□□□□□ -0.89
CCDC187-201ENST00000563590 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
CCDC187-201ENST00000563590 IGKV2-29A2NJV5 120 aaPredicted RBP9.48□□□□□ -0.89
CCDC187-201ENST00000563590 ADAMTSL4-AS1Q5T5F5 129 aa9.48□□□□□ -0.89
CCDC187-201ENST00000563590 HIST2H2BCQ6DN03 193 aa9.48□□□□□ -0.89
CCDC187-201ENST00000563590 MRPL53Q96EL3 112 aaKnown RBP9.48□□□□□ -0.89
CCDC187-201ENST00000563590 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
CCDC187-201ENST00000563590 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
CCDC187-201ENST00000563590 SBSPONQ8IVN8 264 aa9.47□□□□□ -0.89
CCDC187-201ENST00000563590 RNASE1P07998 156 aaKnown RBP9.47□□□□□ -0.89
CCDC187-201ENST00000563590 IGKV3D-7A0A0C4DH55 119 aa9.47□□□□□ -0.89
CCDC187-201ENST00000563590 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
CCDC187-201ENST00000563590 HERVK_113P63121 156 aa9.47□□□□□ -0.89
CCDC187-201ENST00000563590 RHOHQ15669 191 aa9.47□□□□□ -0.89
CCDC187-201ENST00000563590 EBI3Q14213 229 aa9.46□□□□□ -0.89
CCDC187-201ENST00000563590 MUC4Q99102 2169 aa9.46□□□□□ -0.9
CCDC187-201ENST00000563590 MINOS1Q5TGZ0 78 aa9.46□□□□□ -0.9
CCDC187-201ENST00000563590 TOMM7Q9P0U1 55 aa9.46□□□□□ -0.9
CCDC187-201ENST00000563590 NXPH4O95158 308 aa9.45□□□□□ -0.9
CCDC187-201ENST00000563590 POLR2KP53803 58 aaKnown RBP9.45□□□□□ -0.9
CCDC187-201ENST00000563590 ZNF843Q8N446 348 aa9.45□□□□□ -0.9
CCDC187-201ENST00000563590 Q9HAA7 133 aa9.45□□□□□ -0.9
CCDC187-201ENST00000563590 PROK1P58294 105 aa9.45□□□□□ -0.9
CCDC187-201ENST00000563590 TMEM126AQ9H061 195 aa9.45□□□□□ -0.9
CCDC187-201ENST00000563590 MOB4Q9Y3A3 225 aa9.45□□□□□ -0.9
CCDC187-201ENST00000563590 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 H3BT86 120 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 DNAL4O96015 105 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 IGHV3-53P01767 116 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 BAALC-AS2P0C853 105 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
CCDC187-201ENST00000563590 NSUN5P1Q3KNT7 163 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 C20orf203Q8NBC4 194 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 TEP1Q99973 2627 aaKnown RBP9.44□□□□□ -0.9
CCDC187-201ENST00000563590 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 BRI3O95415 125 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 U3KQE9 123 aa9.44□□□□□ -0.9
CCDC187-201ENST00000563590 UBE2E2Q96LR5 201 aa9.43□□□□□ -0.9
CCDC187-201ENST00000563590 HELZ2Q9BYK8 2649 aaKnown RBP9.43□□□□□ -0.9
CCDC187-201ENST00000563590 MINOS1-NBL1R4GNA1 71 aa9.43□□□□□ -0.9
CCDC187-201ENST00000563590 IGHV1-69P01742 117 aa9.43□□□□□ -0.9
CCDC187-201ENST00000563590 LMO4P61968 165 aa9.43□□□□□ -0.9
CCDC187-201ENST00000563590 OR13C6PQ8NH95 151 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms