RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 C20orf203Q8NBC4 194 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 OR11H2Q8NH07 326 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 MIEN1Q9BRT3 115 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 DPM2O94777 84 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 TSHBP01222 138 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 CDPF1Q6NVV7 123 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 ZNF479Q96JC4 524 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 PMCHL2Q9BQD1 86 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 GTSF1LQ9H1H1 148 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 SPANXA1Q9NS26 97 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 UQCR10Q9UDW1 63 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 PAM16Q9Y3D7 125 aa9.89□□□□□ -0.83
SMPD3-205ENST00000563455 IGHV3-73A0A0B4J1V6 119 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 GAGE12BA1L429 117 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 IGIPA6NJ69 53 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 H7C423 109 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 GAGE7O76087 117 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 GAGE12FP0CL80 117 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 GAGE12GP0CL81 117 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 GAGE12IP0CL82 117 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 ODF1Q14990 250 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 TIMM21Q9BVV7 248 aa9.88□□□□□ -0.83
SMPD3-205ENST00000563455 F8VRH5 84 aa9.87□□□□□ -0.83
SMPD3-205ENST00000563455 IGKCP01834 107 aa9.87□□□□□ -0.83
SMPD3-205ENST00000563455 SPART-AS1P0CW21 52 aa9.87□□□□□ -0.83
SMPD3-205ENST00000563455 PMVKQ15126 192 aa9.87□□□□□ -0.83
SMPD3-205ENST00000563455 SLC25A29Q8N8R3 303 aa9.87□□□□□ -0.83
SMPD3-205ENST00000563455 TENM3Q9P273 2699 aa9.86□□□□□ -0.83
SMPD3-205ENST00000563455 H0Y8G0 127 aa9.86□□□□□ -0.83
SMPD3-205ENST00000563455 DEFB135Q30KP9 77 aa9.86□□□□□ -0.83
SMPD3-205ENST00000563455 PRO0255Q9UI72 69 aa9.86□□□□□ -0.83
SMPD3-205ENST00000563455 IGLC3P0DOY3 106 aa9.85□□□□□ -0.83
SMPD3-205ENST00000563455 UBE2D3P61077 147 aa9.85□□□□□ -0.83
SMPD3-205ENST00000563455 UBE2D2P62837 147 aa9.85□□□□□ -0.83
SMPD3-205ENST00000563455 Q6ZSN1 163 aa9.85□□□□□ -0.83
SMPD3-205ENST00000563455 SH2D6Q7Z4S9 175 aa9.85□□□□□ -0.83
SMPD3-205ENST00000563455 ZNRF2Q8NHG8 242 aa9.85□□□□□ -0.83
SMPD3-205ENST00000563455 DKK2Q9UBU2 259 aa9.85□□□□□ -0.83
SMPD3-205ENST00000563455 HHLA3Q9XRX5 114 aa9.85□□□□□ -0.83
SMPD3-205ENST00000563455 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
SMPD3-205ENST00000563455 CSDC2Q9Y534 153 aaKnown RBP9.85□□□□□ -0.83
SMPD3-205ENST00000563455 FHL2Q14192 279 aa9.84□□□□□ -0.83
SMPD3-205ENST00000563455 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
SMPD3-205ENST00000563455 BAALCQ8WXS3 180 aa9.84□□□□□ -0.83
SMPD3-205ENST00000563455 PRO1933Q9H354 126 aa9.84□□□□□ -0.83
SMPD3-205ENST00000563455 NBEAL2Q6ZNJ1 2754 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 IGHV4-28A0A0C4DH34 117 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 DLEU1O43261 78 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 ATP5G1P05496 136 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 P0DMU3 169 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 FAM231AP0DMU4 169 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 FAM231CP0DMU5 169 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 EMP1P54849 157 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 DAD1P61803 113 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 MRPS36P82909 103 aaKnown RBP9.83□□□□□ -0.84
SMPD3-205ENST00000563455 SLC25A34Q6PIV7 304 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 NEGR1Q7Z3B1 354 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 Q8NAQ8 132 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 VCX2Q9H322 139 aa9.83□□□□□ -0.84
SMPD3-205ENST00000563455 PRSS29PA6NIE9 313 aa9.82□□□□□ -0.84
SMPD3-205ENST00000563455 DEFB130BP0DP73 79 aa9.82□□□□□ -0.84
SMPD3-205ENST00000563455 DEFB130AP0DP74 79 aa9.82□□□□□ -0.84
SMPD3-205ENST00000563455 FAM222AQ5U5X8 452 aa9.82□□□□□ -0.84
SMPD3-205ENST00000563455 ATOH7Q8N100 152 aa9.82□□□□□ -0.84
SMPD3-205ENST00000563455 CST9LQ9H4G1 147 aa9.82□□□□□ -0.84
SMPD3-205ENST00000563455 DGAT2L7PQ6IED9 249 aa9.81□□□□□ -0.84
SMPD3-205ENST00000563455 C11orf68Q9H3H3 251 aaKnown RBP9.81□□□□□ -0.84
SMPD3-205ENST00000563455 MRPL35Q9NZE8 188 aaKnown RBP9.81□□□□□ -0.84
SMPD3-205ENST00000563455 MRPS16Q9Y3D3 137 aaKnown RBP9.81□□□□□ -0.84
SMPD3-205ENST00000563455 TRBV25-1A0A075B6N4 114 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 TRAV26-1A0A087WT03 109 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 SIVA1O15304 175 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 COX8AP10176 69 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 ZNF25P17030 456 aaPredicted RBP9.8□□□□□ -0.84
SMPD3-205ENST00000563455 HERVK_113P61574 105 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 SEC11AP67812 179 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 MUC7Q8TAX7 377 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 C2orf88Q9BSF0 95 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 CHCHD7Q9BUK0 85 aa9.8□□□□□ -0.84
SMPD3-205ENST00000563455 RPL39P62891 51 aaKnown RBP9.79□□□□□ -0.84
SMPD3-205ENST00000563455 COL7A1Q02388 2944 aa9.79□□□□□ -0.84
SMPD3-205ENST00000563455 GAGE12JA6NER3 117 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 H3BNG1 76 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 UBE2L6O14933 153 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 LINC00694P0DN24 101 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 HNRNPA3P51991 378 aaKnown RBP9.78□□□□□ -0.84
SMPD3-205ENST00000563455 GAGE1Q13065 139 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 GAGE4Q13068 117 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 GAGE5Q13069 117 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 GAGE13Q4V321 117 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 NFE4Q86UQ8 179 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 SBSPONQ8IVN8 264 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 AMELXQ99217 191 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 TMEM243Q9BU79 118 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 UBE2D4Q9Y2X8 147 aa9.78□□□□□ -0.84
SMPD3-205ENST00000563455 DNAH9Q9NYC9 4486 aa9.77□□□□□ -0.85
SMPD3-205ENST00000563455 IGLV4-3A0A075B6K6 122 aa9.77□□□□□ -0.85
SMPD3-205ENST00000563455 hDV102S1A0JD36 115 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms