RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SPTAN1Q13813 2472 aaKnown RBP9.51□□□□□ -0.89
USB1-207ENST00000563149 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.895e-11■■□□□ 11.9
USB1-207ENST00000563149 TIRAPP58753 221 aa9.51□□□□□ -0.89
USB1-207ENST00000563149 TMEM61Q8N0U2 210 aa9.51□□□□□ -0.89
USB1-207ENST00000563149 ANKRD29Q8N6D5 301 aa9.51□□□□□ -0.89
USB1-207ENST00000563149 C11orf72Q8NBR9 251 aa9.51□□□□□ -0.89
USB1-207ENST00000563149 LINC01587Q99440 93 aa9.51□□□□□ -0.89
USB1-207ENST00000563149 YAE1D1Q9NRH1 226 aa9.51□□□□□ -0.89
USB1-207ENST00000563149 INSP01308 110 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 DYNLRB2Q8TF09 96 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 C9JAW5 83 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 IFITM1P13164 125 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 MIAQ16674 131 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 Q1RN00 199 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 ZFAND6Q6FIF0 208 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 Q6ZSN1 163 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 C18orf65Q6ZTR6 163 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 MAPK1IP1LQ8NDC0 245 aa9.5□□□□□ -0.89
USB1-207ENST00000563149 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
USB1-207ENST00000563149 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
USB1-207ENST00000563149 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
USB1-207ENST00000563149 LINC01620Q4KN68 170 aa9.49□□□□□ -0.89
USB1-207ENST00000563149 CEMP1Q6PRD7 247 aaPredicted RBP9.49□□□□□ -0.89
USB1-207ENST00000563149 Q6ZUT4 128 aa9.49□□□□□ -0.89
USB1-207ENST00000563149 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
USB1-207ENST00000563149 IGLV5-45A0A087WSX0 123 aa9.48□□□□□ -0.89
USB1-207ENST00000563149 TRAV25A0A0B4J276 109 aa9.48□□□□□ -0.89
USB1-207ENST00000563149 SPINK8P0C7L1 97 aa9.48□□□□□ -0.89
USB1-207ENST00000563149 LRRC75A-AS1Q8N1F1 130 aa9.48□□□□□ -0.89
USB1-207ENST00000563149 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
USB1-207ENST00000563149 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
USB1-207ENST00000563149 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
USB1-207ENST00000563149 H7C2G1 150 aa9.47□□□□□ -0.89
USB1-207ENST00000563149 PRSS2P07478 247 aa9.47□□□□□ -0.89
USB1-207ENST00000563149 COX6CP09669 75 aa9.47□□□□□ -0.89
USB1-207ENST00000563149 FHL3Q13643 280 aa9.47□□□□□ -0.89
USB1-207ENST00000563149 FAM19A3Q7Z5A8 133 aa9.47□□□□□ -0.89
USB1-207ENST00000563149 TMEM86BQ8N661 226 aa9.47□□□□□ -0.89
USB1-207ENST00000563149 DOPEY2Q9Y3R5 2298 aa9.46□□□□□ -0.89
USB1-207ENST00000563149 ADARB2-AS1A8MUL3 147 aa9.46□□□□□ -0.9
USB1-207ENST00000563149 CKS1BP61024 79 aa9.46□□□□□ -0.9
USB1-207ENST00000563149 RNASE13Q5GAN3 156 aaKnown RBP9.46□□□□□ -0.9
USB1-207ENST00000563149 ADAMTSL4-AS1Q5T5F5 129 aa9.46□□□□□ -0.9
USB1-207ENST00000563149 ICOSQ9Y6W8 199 aa9.46□□□□□ -0.9
USB1-207ENST00000563149 NDUFA1O15239 70 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 TRIAP1O43715 76 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 PRM2P04554 102 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 RPL13AP40429 203 aaKnown RBP9.45□□□□□ -0.9
USB1-207ENST00000563149 Q9UF83 564 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 NACAE9PAV3 2078 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 MT-ATP8P03928 68 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 XGP55808 180 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 HERVK_113P63121 156 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 CIRBPQ14011 172 aaKnown RBP9.45□□□□□ -0.9
USB1-207ENST00000563149 DGAT2L7PQ6IED9 249 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 IL17DQ8TAD2 202 aa9.45□□□□□ -0.9
USB1-207ENST00000563149 TRBV10-1A0A0K0K1A3 114 aa9.44□□□□□ -0.9
USB1-207ENST00000563149 DEFB113Q30KQ7 82 aa9.44□□□□□ -0.9
USB1-207ENST00000563149 TEX29Q8N6K0 151 aa9.44□□□□□ -0.9
USB1-207ENST00000563149 CSDC2Q9Y534 153 aaKnown RBP9.44□□□□□ -0.9
USB1-207ENST00000563149 IGHV3-38A0A0C4DH36 116 aa9.43□□□□□ -0.9
USB1-207ENST00000563149 H3BT86 120 aa9.43□□□□□ -0.9
USB1-207ENST00000563149 COPS9Q8WXC6 57 aa9.43□□□□□ -0.9
USB1-207ENST00000563149 TMEM101Q96IK0 257 aa9.43□□□□□ -0.9
USB1-207ENST00000563149 CDKN2A-AS1Q9UH64 79 aa9.43□□□□□ -0.9
USB1-207ENST00000563149 KHDC1LQ5JSQ8 128 aa9.42□□□□□ -0.9
USB1-207ENST00000563149 STHQ8IWL8 128 aa9.42□□□□□ -0.9
USB1-207ENST00000563149 NTN5Q8WTR8 489 aaPredicted RBP9.42□□□□□ -0.9
USB1-207ENST00000563149 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
USB1-207ENST00000563149 RPL36AP83881 106 aaKnown RBP9.42□□□□□ -0.9
USB1-207ENST00000563149 RPL36ALQ969Q0 106 aaKnown RBP9.42□□□□□ -0.9
USB1-207ENST00000563149 CR1P17927 2039 aa9.42□□□□□ -0.9
USB1-207ENST00000563149 PRRC2AP48634 2157 aaKnown RBP9.42□□□□□ -0.9
USB1-207ENST00000563149 DAZ2Q13117 558 aaKnown RBP9.41□□□□□ -0.9
USB1-207ENST00000563149 ODF3L2Q3SX64 289 aa9.41□□□□□ -0.9
USB1-207ENST00000563149 DAZ4Q86SG3 579 aaKnown RBP9.41□□□□□ -0.9
USB1-207ENST00000563149 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
USB1-207ENST00000563149 DAZ3Q9NR90 486 aaKnown RBP9.41□□□□□ -0.9
USB1-207ENST00000563149 ITPR1Q14643 2758 aa9.41□□□□□ -0.9
USB1-207ENST00000563149 CELSR1Q9NYQ6 3014 aa9.41□□□□□ -0.9
USB1-207ENST00000563149 IGHV3OR16-12A0A075B7B8 117 aa9.4□□□□□ -0.9
USB1-207ENST00000563149 A8MZ25 164 aa9.4□□□□□ -0.9
USB1-207ENST00000563149 CMC4P56277 68 aaPredicted RBP9.4□□□□□ -0.9
USB1-207ENST00000563149 DOPEY1Q5JWR5 2465 aa9.4□□□□□ -0.9
USB1-207ENST00000563149 UBE2WQ96B02 151 aa9.4□□□□□ -0.9
USB1-207ENST00000563149 XCL2Q9UBD3 114 aa9.4□□□□□ -0.9
USB1-207ENST00000563149 VPS13CQ709C8 3753 aa9.4□□□□□ -0.91
USB1-207ENST00000563149 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.91
USB1-207ENST00000563149 K7EQD1 137 aa9.4□□□□□ -0.91
USB1-207ENST00000563149 LST1O00453 97 aa9.4□□□□□ -0.91
USB1-207ENST00000563149 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.91
USB1-207ENST00000563149 C2orf82Q6UX34 121 aa9.4□□□□□ -0.91
USB1-207ENST00000563149 PPDPFQ9H3Y8 114 aa9.4□□□□□ -0.91
USB1-207ENST00000563149 CSPG4Q6UVK1 2322 aa9.39□□□□□ -0.91
USB1-207ENST00000563149 SPTBN4Q9H254 2564 aa9.39□□□□□ -0.91
USB1-207ENST00000563149 COX6A2Q02221 97 aa9.39□□□□□ -0.91
USB1-207ENST00000563149 Q6ZSV7 163 aa9.39□□□□□ -0.91
USB1-207ENST00000563149 NCOR2Q9Y618 2525 aa9.38□□□□□ -0.91
USB1-207ENST00000563149 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
USB1-207ENST00000563149 H7C423 109 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms