RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 SMDT1Q9H4I9 107 aa12.76□□□□□ -0.37
TMEM249-202ENST00000562477 CRPP02741 224 aa12.75□□□□□ -0.37
TMEM249-202ENST00000562477 Q0VG73 95 aa12.75□□□□□ -0.37
TMEM249-202ENST00000562477 COTL1Q14019 142 aa12.75□□□□□ -0.37
TMEM249-202ENST00000562477 NTN5Q8WTR8 489 aaPredicted RBP12.75□□□□□ -0.37
TMEM249-202ENST00000562477 COX11Q9Y6N1 276 aa12.75□□□□□ -0.37
TMEM249-202ENST00000562477 FAT1Q14517 4588 aa12.75□□□□□ -0.37
TMEM249-202ENST00000562477 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.74□□□□□ -0.37
TMEM249-202ENST00000562477 AMTP48728 403 aa12.74□□□□□ -0.37
TMEM249-202ENST00000562477 LINC00269Q8N2A0 174 aa12.74□□□□□ -0.37
TMEM249-202ENST00000562477 FRZBQ92765 325 aa12.74□□□□□ -0.37
TMEM249-202ENST00000562477 C1orf43Q9BWL3 253 aa12.74□□□□□ -0.37
TMEM249-202ENST00000562477 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
TMEM249-202ENST00000562477 IGLV4-60A0A075B6I1 120 aa12.73□□□□□ -0.37
TMEM249-202ENST00000562477 XGP55808 180 aa12.73□□□□□ -0.37
TMEM249-202ENST00000562477 AMN1Q8IY45 258 aa12.73□□□□□ -0.37
TMEM249-202ENST00000562477 C20orf203Q8NBC4 194 aa12.73□□□□□ -0.37
TMEM249-202ENST00000562477 PRR34Q9NV39 138 aa12.73□□□□□ -0.37
TMEM249-202ENST00000562477 RAB4AP20338 218 aa12.72□□□□□ -0.37
TMEM249-202ENST00000562477 RIGQ13278 110 aa12.72□□□□□ -0.37
TMEM249-202ENST00000562477 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
TMEM249-202ENST00000562477 SMIM27A0A1W2PRY6 76 aa12.71□□□□□ -0.37
TMEM249-202ENST00000562477 SDHAF1A6NFY7 115 aa12.71□□□□□ -0.37
TMEM249-202ENST00000562477 SMKR1H3BMG3 65 aa12.71□□□□□ -0.37
TMEM249-202ENST00000562477 RPS10P46783 165 aaKnown RBP12.71□□□□□ -0.37
TMEM249-202ENST00000562477 HAMPP81172 84 aa12.71□□□□□ -0.37
TMEM249-202ENST00000562477 NCR2O95944 276 aa12.7□□□□□ -0.38
TMEM249-202ENST00000562477 RAB14P61106 215 aa12.7□□□□□ -0.38
TMEM249-202ENST00000562477 MIAQ16674 131 aa12.7□□□□□ -0.38
TMEM249-202ENST00000562477 TRBV6-5A0A0K0K1A5 114 aa12.69□□□□□ -0.38
TMEM249-202ENST00000562477 UBE2L6O14933 153 aa12.69□□□□□ -0.38
TMEM249-202ENST00000562477 KRTAP26-1Q6PEX3 210 aa12.69□□□□□ -0.38
TMEM249-202ENST00000562477 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.68□□□□□ -0.38
TMEM249-202ENST00000562477 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
TMEM249-202ENST00000562477 IGKV2-29A2NJV5 120 aaPredicted RBP12.68□□□□□ -0.38
TMEM249-202ENST00000562477 HLA-DQA1P01909 254 aa12.68□□□□□ -0.38
TMEM249-202ENST00000562477 IFITM2Q01629 132 aa12.68□□□□□ -0.38
TMEM249-202ENST00000562477 REG3AQ06141 175 aa12.68□□□□□ -0.38
TMEM249-202ENST00000562477 LINC01620Q4KN68 170 aa12.68□□□□□ -0.38
TMEM249-202ENST00000562477 Q8N1X5 172 aa12.68□□□□□ -0.38
TMEM249-202ENST00000562477 FAM30AQ9NZY2 134 aa12.68□□□□□ -0.38
TMEM249-202ENST00000562477 IGLV10-54A0A075B6I4 117 aa12.67□□□□□ -0.38
TMEM249-202ENST00000562477 PMCHP20382 165 aa12.67□□□□□ -0.38
TMEM249-202ENST00000562477 MRAP2Q96G30 205 aa12.67□□□□□ -0.38
TMEM249-202ENST00000562477 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
TMEM249-202ENST00000562477 TMEM242Q9NWH2 141 aa12.67□□□□□ -0.38
TMEM249-202ENST00000562477 USP17L23D6RBM5 183 aa12.66□□□□□ -0.38
TMEM249-202ENST00000562477 TSHBP01222 138 aa12.66□□□□□ -0.38
TMEM249-202ENST00000562477 APCSP02743 223 aa12.66□□□□□ -0.38
TMEM249-202ENST00000562477 CAMPP49913 170 aa12.66□□□□□ -0.38
TMEM249-202ENST00000562477 TMEM70Q9BUB7 260 aa12.66□□□□□ -0.38
TMEM249-202ENST00000562477 I3L3M4 83 aa12.65□□□□□ -0.38
TMEM249-202ENST00000562477 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
TMEM249-202ENST00000562477 MRPL54Q6P161 138 aaKnown RBP12.65□□□□□ -0.38
TMEM249-202ENST00000562477 POLR2KP53803 58 aaKnown RBP12.64□□□□□ -0.39
TMEM249-202ENST00000562477 MRPL51Q4U2R6 128 aaKnown RBP12.64□□□□□ -0.39
TMEM249-202ENST00000562477 FAM104BQ5XKR9 115 aa12.64□□□□□ -0.39
TMEM249-202ENST00000562477 NRACQ8N912 160 aa12.64□□□□□ -0.39
TMEM249-202ENST00000562477 RNASEKQ6P5S7 137 aaKnown RBP12.63□□□□□ -0.39
TMEM249-202ENST00000562477 IGKV3OR2-268A0A0C4DH90 116 aa12.62□□□□□ -0.39
TMEM249-202ENST00000562477 A0A1B0GXF2 115 aa12.62□□□□□ -0.39
TMEM249-202ENST00000562477 FGF6P10767 208 aa12.62□□□□□ -0.39
TMEM249-202ENST00000562477 AMMECR1LQ6DCA0 310 aa12.62□□□□□ -0.39
TMEM249-202ENST00000562477 TRBV27A0A0K0K1C4 114 aa12.61□□□□□ -0.39
TMEM249-202ENST00000562477 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
TMEM249-202ENST00000562477 PRSS1P07477 247 aa12.61□□□□□ -0.39
TMEM249-202ENST00000562477 ESDP10768 282 aa12.61□□□□□ -0.39
TMEM249-202ENST00000562477 VPS13BQ7Z7G8 4022 aa12.61□□□□□ -0.39
TMEM249-202ENST00000562477 A0A1B0GW15 77 aa12.6□□□□□ -0.39
TMEM249-202ENST00000562477 HBBP68871 147 aa12.6□□□□□ -0.39
TMEM249-202ENST00000562477 C14orf177Q52M58 125 aa12.6□□□□□ -0.39
TMEM249-202ENST00000562477 TRAV8-4A0A0B4J246 113 aa12.59□□□□□ -0.39
TMEM249-202ENST00000562477 H7C423 109 aa12.58□□□□□ -0.4
TMEM249-202ENST00000562477 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
TMEM249-202ENST00000562477 Q6ZSA8 131 aa12.58□□□□□ -0.4
TMEM249-202ENST00000562477 VCYO14598 125 aa12.57□□□□□ -0.4
TMEM249-202ENST00000562477 PPP1R2P9O14990 202 aa12.57□□□□□ -0.4
TMEM249-202ENST00000562477 CKS2P33552 79 aa12.57□□□□□ -0.4
TMEM249-202ENST00000562477 PNRC1Q12796 327 aaPredicted RBP12.57□□□□□ -0.4
TMEM249-202ENST00000562477 GAGE12HA6NDE8 117 aa12.56□□□□□ -0.4
TMEM249-202ENST00000562477 EPM2AB3EWF7 344 aa12.56□□□□□ -0.4
TMEM249-202ENST00000562477 D6R8Y8 96 aa12.56□□□□□ -0.4
TMEM249-202ENST00000562477 PPP1R17O96001 155 aa12.56□□□□□ -0.4
TMEM249-202ENST00000562477 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
TMEM249-202ENST00000562477 C7orf77A4D0Y5 90 aa12.55□□□□□ -0.4
TMEM249-202ENST00000562477 MT-ND4LP03901 98 aa12.55□□□□□ -0.4
TMEM249-202ENST00000562477 S100A8P05109 93 aa12.55□□□□□ -0.4
TMEM249-202ENST00000562477 FCER1GP30273 86 aa12.55□□□□□ -0.4
TMEM249-202ENST00000562477 F8W036 122 aa12.54□□□□□ -0.4
TMEM249-202ENST00000562477 TNFRSF6BO95407 300 aa12.54□□□□□ -0.4
TMEM249-202ENST00000562477 ZNF25P17030 456 aaPredicted RBP12.54□□□□□ -0.4
TMEM249-202ENST00000562477 Q5VSD8 79 aa12.54□□□□□ -0.4
TMEM249-202ENST00000562477 OR5A1Q8NGJ0 315 aa12.54□□□□□ -0.4
TMEM249-202ENST00000562477 CHCHD10Q8WYQ3 142 aaPredicted RBP12.54□□□□□ -0.4
TMEM249-202ENST00000562477 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
TMEM249-202ENST00000562477 LINC00862A6NCI5 91 aa12.53□□□□□ -0.4
TMEM249-202ENST00000562477 NPYP01303 97 aa12.53□□□□□ -0.4
TMEM249-202ENST00000562477 ATP5L2Q7Z4Y8 100 aa12.53□□□□□ -0.4
TMEM249-202ENST00000562477 ANAPC16Q96DE5 110 aa12.53□□□□□ -0.4
TMEM249-202ENST00000562477 TMEM101Q96IK0 257 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms