RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 TSKUQ8WUA8 353 aa11.71□□□□□ -0.53
CMTM3-204ENST00000562357 REG3AQ06141 175 aa11.7□□□□□ -0.54
CMTM3-204ENST00000562357 GFRA4Q9GZZ7 299 aa11.7□□□□□ -0.54
CMTM3-204ENST00000562357 OSTCQ9NRP0 149 aa11.7□□□□□ -0.54
CMTM3-204ENST00000562357 A0A1B0GUT8 65 aa11.69□□□□□ -0.54
CMTM3-204ENST00000562357 A0A1B0GUV1 79 aa11.69□□□□□ -0.54
CMTM3-204ENST00000562357 HIGD1CA8MV81 97 aa11.69□□□□□ -0.54
CMTM3-204ENST00000562357 FOXA3P55318 350 aaPredicted RBP11.69□□□□□ -0.54
CMTM3-204ENST00000562357 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
CMTM3-204ENST00000562357 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
CMTM3-204ENST00000562357 FAM231BA6NCW3 169 aa11.68□□□□□ -0.54
CMTM3-204ENST00000562357 USP17L23D6RBM5 183 aa11.68□□□□□ -0.54
CMTM3-204ENST00000562357 NCR2O95944 276 aa11.68□□□□□ -0.54
CMTM3-204ENST00000562357 DEFB104AQ8WTQ1 72 aa11.68□□□□□ -0.54
CMTM3-204ENST00000562357 FAM30AQ9NZY2 134 aa11.68□□□□□ -0.54
CMTM3-204ENST00000562357 APCSP02743 223 aa11.67□□□□□ -0.54
CMTM3-204ENST00000562357 INAFM2P0DMQ5 153 aa11.67□□□□□ -0.54
CMTM3-204ENST00000562357 PEA15Q15121 130 aa11.67□□□□□ -0.54
CMTM3-204ENST00000562357 TMEM241Q24JQ0 296 aa11.67□□□□□ -0.54
CMTM3-204ENST00000562357 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
CMTM3-204ENST00000562357 Q6ZSA8 131 aa11.67□□□□□ -0.54
CMTM3-204ENST00000562357 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
CMTM3-204ENST00000562357 RPL39LQ96EH5 51 aaKnown RBP11.67□□□□□ -0.54
CMTM3-204ENST00000562357 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
CMTM3-204ENST00000562357 LINC01620Q4KN68 170 aa11.66□□□□□ -0.54
CMTM3-204ENST00000562357 SDHAF1A6NFY7 115 aa11.65□□□□□ -0.54
CMTM3-204ENST00000562357 PMCHP20382 165 aa11.65□□□□□ -0.54
CMTM3-204ENST00000562357 RIGQ13278 110 aa11.65□□□□□ -0.54
CMTM3-204ENST00000562357 ADIRFQ15847 76 aa11.65□□□□□ -0.54
CMTM3-204ENST00000562357 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
CMTM3-204ENST00000562357 ISOC2Q96AB3 205 aa11.64□□□□□ -0.55
CMTM3-204ENST00000562357 TMEM191AQ9H0A3 160 aa11.64□□□□□ -0.55
CMTM3-204ENST00000562357 SMDT1Q9H4I9 107 aa11.64□□□□□ -0.55
CMTM3-204ENST00000562357 NAT8Q9UHE5 227 aa11.64□□□□□ -0.55
CMTM3-204ENST00000562357 H7C423 109 aa11.63□□□□□ -0.55
CMTM3-204ENST00000562357 I3L3M4 83 aa11.63□□□□□ -0.55
CMTM3-204ENST00000562357 RNASEKQ6P5S7 137 aaKnown RBP11.63□□□□□ -0.55
CMTM3-204ENST00000562357 CLRN3Q8NCR9 226 aa11.63□□□□□ -0.55
CMTM3-204ENST00000562357 ST20Q9HBF5 79 aa11.63□□□□□ -0.55
CMTM3-204ENST00000562357 NAT8BQ9UHF3 227 aa11.63□□□□□ -0.55
CMTM3-204ENST00000562357 V9GYV3 84 aa11.63□□□□□ -0.55
CMTM3-204ENST00000562357 TRBV6-5A0A0K0K1A5 114 aa11.62□□□□□ -0.55
CMTM3-204ENST00000562357 PLA2G1BP04054 148 aaKnown RBP11.62□□□□□ -0.55
CMTM3-204ENST00000562357 RPL23P62829 140 aaKnown RBP11.62□□□□□ -0.55
CMTM3-204ENST00000562357 DGAT2L7PQ6IED9 249 aa11.62□□□□□ -0.55
CMTM3-204ENST00000562357 MRAP2Q96G30 205 aa11.62□□□□□ -0.55
CMTM3-204ENST00000562357 FAT1Q14517 4588 aa11.62□□□□□ -0.55
CMTM3-204ENST00000562357 PRSS1P07477 247 aa11.61□□□□□ -0.55
CMTM3-204ENST00000562357 KRTAP26-1Q6PEX3 210 aa11.61□□□□□ -0.55
CMTM3-204ENST00000562357 BTF3L4Q96K17 158 aa11.61□□□□□ -0.55
CMTM3-204ENST00000562357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
CMTM3-204ENST00000562357 IGKV3OR2-268A0A0C4DH90 116 aa11.6□□□□□ -0.55
CMTM3-204ENST00000562357 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
CMTM3-204ENST00000562357 PPP1R17O96001 155 aa11.6□□□□□ -0.55
CMTM3-204ENST00000562357 SCXQ7RTU7 201 aa11.6□□□□□ -0.55
CMTM3-204ENST00000562357 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
CMTM3-204ENST00000562357 TMEM101Q96IK0 257 aa11.6□□□□□ -0.55
CMTM3-204ENST00000562357 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
CMTM3-204ENST00000562357 AP5S1Q9NUS5 200 aa11.6□□□□□ -0.55
CMTM3-204ENST00000562357 hDV102S1A0JD36 115 aa11.59□□□□□ -0.55
CMTM3-204ENST00000562357 FGF6P10767 208 aa11.59□□□□□ -0.55
CMTM3-204ENST00000562357 ZNF25P17030 456 aaPredicted RBP11.59□□□□□ -0.55
CMTM3-204ENST00000562357 RAB4AP20338 218 aa11.59□□□□□ -0.55
CMTM3-204ENST00000562357 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
CMTM3-204ENST00000562357 LINC00528Q8N1L1 170 aa11.59□□□□□ -0.55
CMTM3-204ENST00000562357 C9JQL5 133 aa11.58□□□□□ -0.56
CMTM3-204ENST00000562357 CFAP161Q6P656 301 aa11.58□□□□□ -0.56
CMTM3-204ENST00000562357 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.57□□□□□ -0.56
CMTM3-204ENST00000562357 RNF185Q96GF1 192 aa11.57□□□□□ -0.56
CMTM3-204ENST00000562357 TMEM242Q9NWH2 141 aa11.57□□□□□ -0.56
CMTM3-204ENST00000562357 A0A1B0GW15 77 aa11.56□□□□□ -0.56
CMTM3-204ENST00000562357 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
CMTM3-204ENST00000562357 FCER1GP30273 86 aa11.56□□□□□ -0.56
CMTM3-204ENST00000562357 SRSF3P84103 164 aaKnown RBP11.56□□□□□ -0.56
CMTM3-204ENST00000562357 C9orf163Q8N9P6 203 aa11.56□□□□□ -0.56
CMTM3-204ENST00000562357 OR5A1Q8NGJ0 315 aa11.56□□□□□ -0.56
CMTM3-204ENST00000562357 SMIM27A0A1W2PRY6 76 aa11.55□□□□□ -0.56
CMTM3-204ENST00000562357 S100A8P05109 93 aa11.55□□□□□ -0.56
CMTM3-204ENST00000562357 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
CMTM3-204ENST00000562357 TRBV27A0A0K0K1C4 114 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 C7orf77A4D0Y5 90 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 VCYO14598 125 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 PPP1R2P9O14990 202 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 TSHBP01222 138 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 RPS10P46783 165 aaKnown RBP11.54□□□□□ -0.56
CMTM3-204ENST00000562357 CAMPP49913 170 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 RAB14P61106 215 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
CMTM3-204ENST00000562357 SMAGPQ0VAQ4 97 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
CMTM3-204ENST00000562357 DNAH8Q96JB1 4490 aa11.54□□□□□ -0.56
CMTM3-204ENST00000562357 SMKR1H3BMG3 65 aa11.53□□□□□ -0.56
CMTM3-204ENST00000562357 ESDP10768 282 aa11.53□□□□□ -0.56
CMTM3-204ENST00000562357 POLR2KP53803 58 aaKnown RBP11.53□□□□□ -0.56
CMTM3-204ENST00000562357 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
CMTM3-204ENST00000562357 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
CMTM3-204ENST00000562357 F8W036 122 aa11.52□□□□□ -0.57
CMTM3-204ENST00000562357 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
CMTM3-204ENST00000562357 IGHV3-64A0A075B6Q5 118 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 209.2 ms