RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 TNFRSF18Q9Y5U5 241 aa11.82□□□□□ -0.52
PKD1-225ENST00000562297 X6R8D5 127 aa11.82□□□□□ -0.52
PKD1-225ENST00000562297 C3orf56Q8N813 242 aa11.82□□□□□ -0.52
PKD1-225ENST00000562297 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
PKD1-225ENST00000562297 DNAJC30Q96LL9 226 aa11.82□□□□□ -0.52
PKD1-225ENST00000562297 MRPL35Q9NZE8 188 aaKnown RBP11.82□□□□□ -0.52
PKD1-225ENST00000562297 SHISA2Q6UWI4 295 aa11.81□□□□□ -0.52
PKD1-225ENST00000562297 COX11Q9Y6N1 276 aa11.81□□□□□ -0.52
PKD1-225ENST00000562297 NMUP48645 174 aa11.81□□□□□ -0.52
PKD1-225ENST00000562297 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
PKD1-225ENST00000562297 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
PKD1-225ENST00000562297 GAGE12BA1L429 117 aa11.8□□□□□ -0.52
PKD1-225ENST00000562297 GAGE7O76087 117 aa11.8□□□□□ -0.52
PKD1-225ENST00000562297 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
PKD1-225ENST00000562297 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
PKD1-225ENST00000562297 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
PKD1-225ENST00000562297 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
PKD1-225ENST00000562297 BOD1L2Q8IYS8 172 aa11.8□□□□□ -0.52
PKD1-225ENST00000562297 TIMM17AQ99595 171 aa11.8□□□□□ -0.52
PKD1-225ENST00000562297 DPM2O94777 84 aa11.79□□□□□ -0.52
PKD1-225ENST00000562297 IGKCP01834 107 aa11.79□□□□□ -0.52
PKD1-225ENST00000562297 OXLD1Q5BKU9 147 aa11.79□□□□□ -0.52
PKD1-225ENST00000562297 F8VRH5 84 aa11.78□□□□□ -0.52
PKD1-225ENST00000562297 SLC25A29Q8N8R3 303 aa11.78□□□□□ -0.52
PKD1-225ENST00000562297 TMEM141Q96I45 108 aa11.78□□□□□ -0.52
PKD1-225ENST00000562297 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.52
PKD1-225ENST00000562297 SMIM9A6NGZ8 99 aa11.77□□□□□ -0.52
PKD1-225ENST00000562297 PRSS29PA6NIE9 313 aa11.77□□□□□ -0.52
PKD1-225ENST00000562297 K7EQD1 137 aa11.77□□□□□ -0.52
PKD1-225ENST00000562297 TAX1BP3O14907 124 aa11.77□□□□□ -0.52
PKD1-225ENST00000562297 APOC4P55056 127 aa11.77□□□□□ -0.52
PKD1-225ENST00000562297 LINC00612Q8N6U2 182 aa11.77□□□□□ -0.52
PKD1-225ENST00000562297 IGKV2D-26A0A0A0MRZ7 120 aa11.77□□□□□ -0.53
PKD1-225ENST00000562297 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
PKD1-225ENST00000562297 PTTG1IPP53801 180 aa11.77□□□□□ -0.53
PKD1-225ENST00000562297 DEFB135Q30KP9 77 aa11.77□□□□□ -0.53
PKD1-225ENST00000562297 CHTOPQ9Y3Y2 248 aaKnown RBP11.77□□□□□ -0.53
PKD1-225ENST00000562297 PLNP26678 52 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 EMP1P54849 157 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 KRTAP10-11P60412 298 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 TRBV7-3A0A075B6L6 115 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 CIDEAO60543 219 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 IGHV4-30-4P0DP06 118 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 CHCHD7Q9BUK0 85 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 TTTY13Q9BZ97 58 aa11.76□□□□□ -0.53
PKD1-225ENST00000562297 IGHV3-38A0A0C4DH36 116 aa11.75□□□□□ -0.53
PKD1-225ENST00000562297 EGFEM1PQ0D2K5 195 aa11.75□□□□□ -0.53
PKD1-225ENST00000562297 ZC2HC1BQ5TFG8 222 aa11.75□□□□□ -0.53
PKD1-225ENST00000562297 ZNRF2Q8NHG8 242 aa11.75□□□□□ -0.53
PKD1-225ENST00000562297 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
PKD1-225ENST00000562297 UBE2V1Q13404 147 aa11.74□□□□□ -0.53
PKD1-225ENST00000562297 PHLDA1Q8WV24 401 aaPredicted RBP11.74□□□□□ -0.53
PKD1-225ENST00000562297 PCP4P48539 62 aa11.74□□□□□ -0.53
PKD1-225ENST00000562297 PMVKQ15126 192 aa11.74□□□□□ -0.53
PKD1-225ENST00000562297 OPRPNQ99935 248 aaPredicted RBP11.74□□□□□ -0.53
PKD1-225ENST00000562297 CST9LQ9H4G1 147 aa11.74□□□□□ -0.53
PKD1-225ENST00000562297 IGLV4-69A0A075B6H9 119 aa11.73□□□□□ -0.53
PKD1-225ENST00000562297 TRBV6-4A0A1B0GX49 114 aa11.73□□□□□ -0.53
PKD1-225ENST00000562297 CCL25O15444 150 aa11.73□□□□□ -0.53
PKD1-225ENST00000562297 FHL2Q14192 279 aa11.73□□□□□ -0.53
PKD1-225ENST00000562297 UBE2D3P61077 147 aa11.72□□□□□ -0.53
PKD1-225ENST00000562297 UBE2D2P62837 147 aa11.72□□□□□ -0.53
PKD1-225ENST00000562297 RPL36AP83881 106 aaKnown RBP11.72□□□□□ -0.53
PKD1-225ENST00000562297 COTL1Q14019 142 aa11.72□□□□□ -0.53
PKD1-225ENST00000562297 RPL36ALQ969Q0 106 aaKnown RBP11.72□□□□□ -0.53
PKD1-225ENST00000562297 PYGO1Q9Y3Y4 419 aa11.72□□□□□ -0.53
PKD1-225ENST00000562297 NOTCH1P46531 2555 aa11.72□□□□□ -0.53
PKD1-225ENST00000562297 SIVA1O15304 175 aa11.72□□□□□ -0.53
PKD1-225ENST00000562297 OR11H2Q8NH07 326 aa11.72□□□□□ -0.53
PKD1-225ENST00000562297 IGLV4-3A0A075B6K6 122 aa11.71□□□□□ -0.53
PKD1-225ENST00000562297 HSD52Q0P140 79 aa11.71□□□□□ -0.53
PKD1-225ENST00000562297 K7EP13 123 aa11.7□□□□□ -0.54
PKD1-225ENST00000562297 DEFB130BP0DP73 79 aa11.7□□□□□ -0.54
PKD1-225ENST00000562297 DEFB130AP0DP74 79 aa11.7□□□□□ -0.54
PKD1-225ENST00000562297 VAMP3Q15836 100 aa11.7□□□□□ -0.54
PKD1-225ENST00000562297 NBEAL1Q6ZS30 2694 aa11.7□□□□□ -0.54
PKD1-225ENST00000562297 DAZ4Q86SG3 579 aaKnown RBP11.7□□□□□ -0.54
PKD1-225ENST00000562297 DAZ3Q9NR90 486 aaKnown RBP11.7□□□□□ -0.54
PKD1-225ENST00000562297 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 IGHV4-28A0A0C4DH34 117 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 LOC100131303A0A0U1RQF7 123 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 GAGE12JA6NER3 117 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 C11orf86A6NJI1 115 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 SEC11AP67812 179 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 GAGE4Q13068 117 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 GAGE5Q13069 117 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 Q8NAQ8 132 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 RNF183Q96D59 192 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 UBE2D4Q9Y2X8 147 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
PKD1-225ENST00000562297 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
PKD1-225ENST00000562297 FAM222AQ5U5X8 452 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 CEMP1Q6PRD7 247 aaPredicted RBP11.69□□□□□ -0.54
PKD1-225ENST00000562297 NTM-AS1Q6ZSK4 140 aa11.69□□□□□ -0.54
PKD1-225ENST00000562297 LYRM9A8MSI8 78 aa11.68□□□□□ -0.54
PKD1-225ENST00000562297 AMELXQ99217 191 aa11.68□□□□□ -0.54
PKD1-225ENST00000562297 A8MZ25 164 aa11.67□□□□□ -0.54
PKD1-225ENST00000562297 DEFB4AO15263 64 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms