RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 CSNK1G2-AS1Q8NCQ2 148 aa3.88□□□□□ -1.79
CAPN3-211ENST00000562199 TMEM14CQ9P0S9 112 aa3.88□□□□□ -1.79
CAPN3-211ENST00000562199 DSCAML1Q8TD84 2053 aa3.88□□□□□ -1.79
CAPN3-211ENST00000562199 CACNA1EQ15878 2313 aa3.88□□□□□ -1.79
CAPN3-211ENST00000562199 KNL1Q8NG31 2342 aa3.88□□□□□ -1.79
CAPN3-211ENST00000562199 LAMA3Q16787 3333 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 A0A096LNJ9 63 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 IGLV5-52A0A0A0MRZ9 124 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 IGKV3D-20A0A0C4DH25 116 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 TRBV10-2A0A0K0K1G8 114 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 IGLV2-23P01705 113 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 WT1-ASQ06250 92 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 SYCNQ0VAF6 134 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 CNEP1R1Q8N9A8 125 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 C9orf106Q8NAJ2 232 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 B9D2Q9BPU9 175 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 TTTY13Q9BZ97 58 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 XAGE1AQ9HD64 81 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 MRPL36Q9P0J6 103 aaKnown RBP3.87□□□□□ -1.79
CAPN3-211ENST00000562199 U3KQK5 164 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 USF3Q68DE3 2245 aa3.87□□□□□ -1.79
CAPN3-211ENST00000562199 AGRNO00468 2067 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 IGHV3-16A0A0C4DH30 117 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 A0A1W2PNU3 283 aaPredicted RBP3.86□□□□□ -1.79
CAPN3-211ENST00000562199 DNAJC9-AS1A6NH13 148 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 E7EUB6 86 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 IGLV2-11P01706 119 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 ARMS2P0C7Q2 107 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 COX7A1P24310 79 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 CD24P25063 80 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 ODF3L2Q3SX64 289 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 C10orf55Q5SWW7 151 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 NDUFA11Q86Y39 141 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 PRSS3P2Q8NHM4 247 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 DYNLRB2Q8TF09 96 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 TMEM141Q96I45 108 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 SCGB3A1Q96QR1 104 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 NDUFA12Q9UI09 145 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 SMAD5-AS1Q9Y6J3 95 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 SDK2Q58EX2 2172 aa3.86□□□□□ -1.79
CAPN3-211ENST00000562199 DOCK10Q96BY6 2186 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 GON4LQ3T8J9 2241 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 FAM223BA6NKX1 122 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 H3BRN7 92 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 IGHV1-46P01743 117 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 RPL27AP46776 148 aaKnown RBP3.85□□□□□ -1.79
CAPN3-211ENST00000562199 EGFEM1PQ0D2K5 195 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 MRGPRG-AS1Q2M3A8 158 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 LYPD1Q8N2G4 141 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 ZNF414Q96IQ9 312 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 TIMM21Q9BVV7 248 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 ZNRD1Q9P1U0 126 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 REV3LO60673 3130 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 DSCAMO60469 2012 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 CDH23Q9H251 3354 aa3.85□□□□□ -1.79
CAPN3-211ENST00000562199 TRBV7-3A0A075B6L6 115 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 IGHV3-74A0A0B4J1X5 117 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 LINC01546A6NGU7 62 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 C16orf90A8MZG2 172 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 INAFM1C9JVW0 142 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 D6R8Y8 96 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 PI4KAP42356 2102 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 DSCR9P59020 149 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 TSPEAR-AS2P59090 65 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 LYZP61626 148 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 FAM229BQ4G0N7 80 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 Q6JHZ5 121 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 ORMDL3Q8N138 153 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 C20orf197Q8N268 126 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 BPESC1Q9GZL8 116 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 PHLDA3Q9Y5J5 127 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 MYO9BQ13459 2157 aa3.84□□□□□ -1.79
CAPN3-211ENST00000562199 LAMA2P24043 3122 aaKnown RBP3.84□□□□□ -1.8
CAPN3-211ENST00000562199 CABIN1Q9Y6J0 2220 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV3-72A0A0B4J1Y9 119 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 LOC107984156A0A0G2JMH3 177 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 TEX49A0A1B0GTD5 131 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 CCL3L1P16619 93 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 IFI27P40305 119 aaPredicted RBP3.83□□□□□ -1.8
CAPN3-211ENST00000562199 UBE2D1P51668 147 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 PLGLAQ15195 96 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 ARL17AQ8IVW1 177 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 DEFB108BQ8NET1 73 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 RETNLBQ9BQ08 111 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 CYP4F30PQ9H0H9 118 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 KLK15Q9H2R5 256 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 ZNF580Q9UK33 172 aa3.83□□□□□ -1.8
CAPN3-211ENST00000562199 TIMM8BQ9Y5J9 83 aaPredicted RBP3.83□□□□□ -1.8
CAPN3-211ENST00000562199 BRWD1Q9NSI6 2320 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 DIDO1Q9BTC0 2240 aaKnown RBP3.82□□□□□ -1.8
CAPN3-211ENST00000562199 IGLV5-37A0A075B6J1 123 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 TRBV25-1A0A075B6N4 114 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 IGHV3OR16-10A0A075B7F0 116 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
CAPN3-211ENST00000562199 I3L2K1 104 aa3.82□□□□□ -1.8
CAPN3-211ENST00000562199 SH2D1AO60880 128 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms