RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 RMI2Q96E14 147 aa6.78□□□□□ -1.32
HERC1-212ENST00000561348 TMEM243Q9BU79 118 aa6.78□□□□□ -1.32
HERC1-212ENST00000561348 DNAH17Q9UFH2 4485 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 IGKV3OR2-268A0A0C4DH90 116 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 FAM231BA6NCW3 169 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 F8W036 122 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 GAS8-AS1O95177 125 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 LAGE3Q14657 143 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 C10orf91Q5T1B1 145 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 SVBPQ8N300 66 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 BAALCQ8WXS3 180 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 TMEM191AQ9H0A3 160 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 ST20Q9HBF5 79 aa6.77□□□□□ -1.33
HERC1-212ENST00000561348 CARHSP1Q9Y2V2 147 aaKnown RBP6.77□□□□□ -1.33
HERC1-212ENST00000561348 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.76□□□□□ -1.33
HERC1-212ENST00000561348 SMIM27A0A1W2PRY6 76 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 HLA-DQA1P01909 254 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 APCSP02743 223 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 RAB4AP20338 218 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 PKIAP61925 76 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 RBX1P62877 108 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 AMMECR1LQ6DCA0 310 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 RNASEKQ6P5S7 137 aaKnown RBP6.76□□□□□ -1.33
HERC1-212ENST00000561348 LINC00269Q8N2A0 174 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 C1orf43Q9BWL3 253 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 SEC11CQ9BY50 192 aa6.76□□□□□ -1.33
HERC1-212ENST00000561348 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 IGLV10-54A0A075B6I4 117 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 SNAPINO95295 136 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 MT-ND4LP03901 98 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 RPS10P46783 165 aaKnown RBP6.75□□□□□ -1.33
HERC1-212ENST00000561348 Q0VG73 95 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 IQCJQ1A5X6 159 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 RNF185Q96GF1 192 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 CHCHD7Q9BUK0 85 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 FAT2Q9NYQ8 4349 aa6.75□□□□□ -1.33
HERC1-212ENST00000561348 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.74□□□□□ -1.33
HERC1-212ENST00000561348 IGLV5-52A0A0A0MRZ9 124 aa6.74□□□□□ -1.33
HERC1-212ENST00000561348 IGKV2-29A2NJV5 120 aaPredicted RBP6.74□□□□□ -1.33
HERC1-212ENST00000561348 I3L3M4 83 aa6.74□□□□□ -1.33
HERC1-212ENST00000561348 PPP1R2P9O14990 202 aa6.74□□□□□ -1.33
HERC1-212ENST00000561348 ADCYAP1P18509 176 aa6.74□□□□□ -1.33
HERC1-212ENST00000561348 ENHOQ6UWT2 76 aa6.74□□□□□ -1.33
HERC1-212ENST00000561348 MRAP2Q96G30 205 aa6.74□□□□□ -1.33
HERC1-212ENST00000561348 TMEM242Q9NWH2 141 aa6.74□□□□□ -1.33
HERC1-212ENST00000561348 COX11Q9Y6N1 276 aa6.74□□□□□ -1.33
HERC1-212ENST00000561348 PKD1P98161 4303 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 IGLV4-60A0A075B6I1 120 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 LOC105371267A0A1B0GV96 52 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 TMEM238LA0A1B0GVL6 79 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 S100A8P05109 93 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 FCER1GP30273 86 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 CKS2P33552 79 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 HBBP68871 147 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 REG3AQ06141 175 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 PNRC1Q12796 327 aaPredicted RBP6.73□□□□□ -1.33
HERC1-212ENST00000561348 WFDC2Q14508 124 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 MRPL51Q4U2R6 128 aaKnown RBP6.73□□□□□ -1.33
HERC1-212ENST00000561348 Q8N814 137 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 FRZBQ92765 325 aa6.73□□□□□ -1.33
HERC1-212ENST00000561348 A0A1B0GW15 77 aa6.72□□□□□ -1.33
HERC1-212ENST00000561348 LRCOL1A6NCL2 159 aa6.72□□□□□ -1.33
HERC1-212ENST00000561348 FAM104BQ5XKR9 115 aa6.72□□□□□ -1.33
HERC1-212ENST00000561348 MAPKAPK5-AS1Q8N8E1 139 aa6.72□□□□□ -1.33
HERC1-212ENST00000561348 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
HERC1-212ENST00000561348 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
HERC1-212ENST00000561348 EIF4EBP3O60516 100 aaPredicted RBP6.71□□□□□ -1.34
HERC1-212ENST00000561348 GCSHP23434 173 aa6.71□□□□□ -1.34
HERC1-212ENST00000561348 MIAQ16674 131 aa6.71□□□□□ -1.34
HERC1-212ENST00000561348 C20orf203Q8NBC4 194 aa6.71□□□□□ -1.34
HERC1-212ENST00000561348 CLRN3Q8NCR9 226 aa6.71□□□□□ -1.34
HERC1-212ENST00000561348 TMEM101Q96IK0 257 aa6.71□□□□□ -1.34
HERC1-212ENST00000561348 BTF3L4Q96K17 158 aa6.71□□□□□ -1.34
HERC1-212ENST00000561348 TRBV6-5A0A0K0K1A5 114 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 D6R8Y8 96 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 VCYO14598 125 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 PPP1R17O96001 155 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 FGF6P10767 208 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 SUMO2P61956 95 aaKnown RBP6.7□□□□□ -1.34
HERC1-212ENST00000561348 HAMPP81172 84 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 LINC01620Q4KN68 170 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 DGAT2L7PQ6IED9 249 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
HERC1-212ENST00000561348 LOC389332A0A1B0GUA5 103 aa6.69□□□□□ -1.34
HERC1-212ENST00000561348 TNFRSF6BO95407 300 aa6.69□□□□□ -1.34
HERC1-212ENST00000561348 TSHBP01222 138 aa6.69□□□□□ -1.34
HERC1-212ENST00000561348 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
HERC1-212ENST00000561348 NRACQ8N912 160 aa6.69□□□□□ -1.34
HERC1-212ENST00000561348 KIR2DL4Q99706 377 aa6.69□□□□□ -1.34
HERC1-212ENST00000561348 PKHD1P08F94 4074 aa6.68□□□□□ -1.34
HERC1-212ENST00000561348 A0A1B0GUV1 79 aa6.68□□□□□ -1.34
HERC1-212ENST00000561348 A0A1B0GXF2 115 aa6.68□□□□□ -1.34
HERC1-212ENST00000561348 C7orf77A4D0Y5 90 aa6.68□□□□□ -1.34
HERC1-212ENST00000561348 USP17L23D6RBM5 183 aa6.68□□□□□ -1.34
HERC1-212ENST00000561348 POLR2KP53803 58 aaKnown RBP6.68□□□□□ -1.34
HERC1-212ENST00000561348 TMEM136Q6ZRR5 245 aa6.68□□□□□ -1.34
HERC1-212ENST00000561348 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
HERC1-212ENST00000561348 NTN5Q8WTR8 489 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms