RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 C1orf43Q9BWL3 253 aa12.22□□□□□ -0.45
LINC01220-202ENST00000561000 CRPP02741 224 aa12.21□□□□□ -0.45
LINC01220-202ENST00000561000 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.45
LINC01220-202ENST00000561000 ATRAIDQ6UW56 229 aa12.21□□□□□ -0.45
LINC01220-202ENST00000561000 ENHOQ6UWT2 76 aa12.21□□□□□ -0.45
LINC01220-202ENST00000561000 TRAV26-2A0A0B4J265 109 aa12.2□□□□□ -0.46
LINC01220-202ENST00000561000 MPV17L2Q567V2 206 aa12.2□□□□□ -0.46
LINC01220-202ENST00000561000 NUP35Q8NFH5 326 aa12.2□□□□□ -0.46
LINC01220-202ENST00000561000 M0QY20 66 aa12.19□□□□□ -0.46
LINC01220-202ENST00000561000 GAS8-AS1O95177 125 aa12.19□□□□□ -0.46
LINC01220-202ENST00000561000 SMIM17P0DL12 118 aa12.19□□□□□ -0.46
LINC01220-202ENST00000561000 WDR73Q6P4I2 378 aa12.19□□□□□ -0.46
LINC01220-202ENST00000561000 CHAC1Q9BUX1 264 aa12.19□□□□□ -0.46
LINC01220-202ENST00000561000 C14orf177Q52M58 125 aa12.18□□□□□ -0.46
LINC01220-202ENST00000561000 DEFB104AQ8WTQ1 72 aa12.18□□□□□ -0.46
LINC01220-202ENST00000561000 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
LINC01220-202ENST00000561000 DPH3P1Q9H4G8 78 aa12.18□□□□□ -0.46
LINC01220-202ENST00000561000 SMIM27A0A1W2PRY6 76 aa12.17□□□□□ -0.46
LINC01220-202ENST00000561000 TMEM218A2RU14 115 aa12.17□□□□□ -0.46
LINC01220-202ENST00000561000 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
LINC01220-202ENST00000561000 TRGC1P0CF51 173 aa12.17□□□□□ -0.46
LINC01220-202ENST00000561000 PKIAP61925 76 aa12.16□□□□□ -0.46
LINC01220-202ENST00000561000 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
LINC01220-202ENST00000561000 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
LINC01220-202ENST00000561000 CIRBP-AS1Q8TBR5 109 aa12.16□□□□□ -0.46
LINC01220-202ENST00000561000 A0A1B0GUT8 65 aa12.15□□□□□ -0.46
LINC01220-202ENST00000561000 HLA-DQA1P01909 254 aa12.15□□□□□ -0.46
LINC01220-202ENST00000561000 GAGE6Q13070 117 aa12.15□□□□□ -0.46
LINC01220-202ENST00000561000 UQCC3Q6UW78 93 aa12.15□□□□□ -0.46
LINC01220-202ENST00000561000 GATD1Q8NB37 220 aa12.15□□□□□ -0.46
LINC01220-202ENST00000561000 FAM231BA6NCW3 169 aa12.14□□□□□ -0.47
LINC01220-202ENST00000561000 USP17L23D6RBM5 183 aa12.14□□□□□ -0.47
LINC01220-202ENST00000561000 CLPSL2Q6UWE3 100 aa12.14□□□□□ -0.47
LINC01220-202ENST00000561000 RPL39LQ96EH5 51 aaKnown RBP12.14□□□□□ -0.47
LINC01220-202ENST00000561000 RNF185Q96GF1 192 aa12.14□□□□□ -0.47
LINC01220-202ENST00000561000 KRTAP29-1A8MX34 341 aaPredicted RBP12.13□□□□□ -0.47
LINC01220-202ENST00000561000 F8W036 122 aa12.13□□□□□ -0.47
LINC01220-202ENST00000561000 RBX1P62877 108 aa12.13□□□□□ -0.47
LINC01220-202ENST00000561000 MIAQ16674 131 aa12.13□□□□□ -0.47
LINC01220-202ENST00000561000 NAT8BQ9UHF3 227 aa12.13□□□□□ -0.47
LINC01220-202ENST00000561000 TRBV25-1A0A075B6N4 114 aa12.12□□□□□ -0.47
LINC01220-202ENST00000561000 AMN1Q8IY45 258 aa12.12□□□□□ -0.47
LINC01220-202ENST00000561000 LINC00269Q8N2A0 174 aa12.12□□□□□ -0.47
LINC01220-202ENST00000561000 SMKR1H3BMG3 65 aa12.11□□□□□ -0.47
LINC01220-202ENST00000561000 MRPL54Q6P161 138 aaKnown RBP12.11□□□□□ -0.47
LINC01220-202ENST00000561000 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
LINC01220-202ENST00000561000 IGHV1-24A0A0C4DH33 117 aa12.1□□□□□ -0.47
LINC01220-202ENST00000561000 PRSS1P07477 247 aa12.1□□□□□ -0.47
LINC01220-202ENST00000561000 RPS10P46783 165 aaKnown RBP12.1□□□□□ -0.47
LINC01220-202ENST00000561000 PNRC1Q12796 327 aaPredicted RBP12.1□□□□□ -0.47
LINC01220-202ENST00000561000 BORCS7Q96B45 105 aa12.1□□□□□ -0.47
LINC01220-202ENST00000561000 TMEM191AQ9H0A3 160 aa12.1□□□□□ -0.47
LINC01220-202ENST00000561000 PRR34Q9NV39 138 aa12.1□□□□□ -0.47
LINC01220-202ENST00000561000 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
LINC01220-202ENST00000561000 H7C1H1 209 aa12.09□□□□□ -0.47
LINC01220-202ENST00000561000 NCR2O95944 276 aa12.09□□□□□ -0.47
LINC01220-202ENST00000561000 RAB4AP20338 218 aa12.09□□□□□ -0.47
LINC01220-202ENST00000561000 CAMPP49913 170 aa12.09□□□□□ -0.47
LINC01220-202ENST00000561000 RIGQ13278 110 aa12.09□□□□□ -0.47
LINC01220-202ENST00000561000 IQCJQ1A5X6 159 aa12.09□□□□□ -0.47
LINC01220-202ENST00000561000 KRTAP10-4P60372 401 aaPredicted RBP12.08□□□□□ -0.48
LINC01220-202ENST00000561000 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
LINC01220-202ENST00000561000 SEC11CQ9BY50 192 aa12.08□□□□□ -0.48
LINC01220-202ENST00000561000 NIT2Q9NQR4 276 aa12.08□□□□□ -0.48
LINC01220-202ENST00000561000 DGAT2L7PQ6IED9 249 aa12.07□□□□□ -0.48
LINC01220-202ENST00000561000 IGLV10-54A0A075B6I4 117 aa12.06□□□□□ -0.48
LINC01220-202ENST00000561000 REG3AQ06141 175 aa12.06□□□□□ -0.48
LINC01220-202ENST00000561000 KRTAP26-1Q6PEX3 210 aa12.06□□□□□ -0.48
LINC01220-202ENST00000561000 SMIM15Q7Z3B0 74 aa12.06□□□□□ -0.48
LINC01220-202ENST00000561000 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
LINC01220-202ENST00000561000 MT-ND4LP03901 98 aa12.05□□□□□ -0.48
LINC01220-202ENST00000561000 MRPL51Q4U2R6 128 aaKnown RBP12.05□□□□□ -0.48
LINC01220-202ENST00000561000 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
LINC01220-202ENST00000561000 ANAPC16Q96DE5 110 aa12.05□□□□□ -0.48
LINC01220-202ENST00000561000 TMEM243Q9BU79 118 aa12.05□□□□□ -0.48
LINC01220-202ENST00000561000 CARHSP1Q9Y2V2 147 aaKnown RBP12.05□□□□□ -0.48
LINC01220-202ENST00000561000 RPL37AP61513 92 aaKnown RBP12.03□□□□□ -0.48
LINC01220-202ENST00000561000 FAM104BQ5XKR9 115 aa12.03□□□□□ -0.48
LINC01220-202ENST00000561000 NRACQ8N912 160 aa12.03□□□□□ -0.48
LINC01220-202ENST00000561000 C20orf203Q8NBC4 194 aa12.03□□□□□ -0.48
LINC01220-202ENST00000561000 IGLV4-60A0A075B6I1 120 aa12.02□□□□□ -0.49
LINC01220-202ENST00000561000 HBBP68871 147 aa12.02□□□□□ -0.49
LINC01220-202ENST00000561000 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
LINC01220-202ENST00000561000 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
LINC01220-202ENST00000561000 hDV102S1A0JD36 115 aa12.01□□□□□ -0.49
LINC01220-202ENST00000561000 SDHAF1A6NFY7 115 aa12.01□□□□□ -0.49
LINC01220-202ENST00000561000 OXTP01178 125 aa12.01□□□□□ -0.49
LINC01220-202ENST00000561000 SLC7A5P1Q8MH63 180 aa12.01□□□□□ -0.49
LINC01220-202ENST00000561000 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
LINC01220-202ENST00000561000 TRAV8-4A0A0B4J246 113 aa12□□□□□ -0.49
LINC01220-202ENST00000561000 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
LINC01220-202ENST00000561000 C7orf77A4D0Y5 90 aa12□□□□□ -0.49
LINC01220-202ENST00000561000 UBE2L6O14933 153 aa12□□□□□ -0.49
LINC01220-202ENST00000561000 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
LINC01220-202ENST00000561000 PANO1I0J062 215 aa11.99□□□□□ -0.49
LINC01220-202ENST00000561000 AMTP48728 403 aa11.99□□□□□ -0.49
LINC01220-202ENST00000561000 COTL1Q14019 142 aa11.99□□□□□ -0.49
LINC01220-202ENST00000561000 MRAP2Q96G30 205 aa11.99□□□□□ -0.49
LINC01220-202ENST00000561000 DPH3Q96FX2 82 aa11.98□□□□□ -0.49
LINC01220-202ENST00000561000 AP5S1Q9NUS5 200 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms