RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 AMTP48728 403 aa11.43□□□□□ -0.58
TPM1-226ENST00000560959 COTL1Q14019 142 aa11.43□□□□□ -0.58
TPM1-226ENST00000560959 Q5BKY6 102 aa11.43□□□□□ -0.58
TPM1-226ENST00000560959 CACNG7P62955 275 aa11.42□□□□□ -0.58
TPM1-226ENST00000560959 ALG5Q9Y673 324 aa11.42□□□□□ -0.58
TPM1-226ENST00000560959 IGLC6P0CF74 106 aa11.41□□□□□ -0.58
TPM1-226ENST00000560959 ZNF664Q8N3J9 261 aa11.41□□□□□ -0.58
TPM1-226ENST00000560959 IGKV3OR2-268A0A0C4DH90 116 aa11.4□□□□□ -0.58
TPM1-226ENST00000560959 SCO2A0A1W2PP80 73 aa11.4□□□□□ -0.58
TPM1-226ENST00000560959 RPS20P60866 119 aaKnown RBP11.4□□□□□ -0.58
TPM1-226ENST00000560959 TMUB2Q71RG4 321 aa11.4□□□□□ -0.58
TPM1-226ENST00000560959 FER1L6-AS1Q8NA97 138 aa11.4□□□□□ -0.58
TPM1-226ENST00000560959 KRTAP9-2Q9BYQ4 174 aa11.4□□□□□ -0.58
TPM1-226ENST00000560959 F2Z2F3 143 aa11.39□□□□□ -0.59
TPM1-226ENST00000560959 H7C423 109 aa11.39□□□□□ -0.59
TPM1-226ENST00000560959 GIPP09681 153 aaPredicted RBP11.39□□□□□ -0.59
TPM1-226ENST00000560959 FOXI1Q12951 378 aa11.39□□□□□ -0.59
TPM1-226ENST00000560959 PSORS1C2Q9UIG4 136 aa11.39□□□□□ -0.59
TPM1-226ENST00000560959 PFDN1O60925 122 aa11.38□□□□□ -0.59
TPM1-226ENST00000560959 TRGC1P0CF51 173 aa11.38□□□□□ -0.59
TPM1-226ENST00000560959 AMMECR1LQ6DCA0 310 aa11.37□□□□□ -0.59
TPM1-226ENST00000560959 MBD3L1Q8WWY6 194 aa11.37□□□□□ -0.59
TPM1-226ENST00000560959 CARD19Q96LW7 228 aa11.37□□□□□ -0.59
TPM1-226ENST00000560959 TPPP3Q9BW30 176 aa11.37□□□□□ -0.59
TPM1-226ENST00000560959 FXYD6-FXYD2A0A087WZ82 144 aa11.36□□□□□ -0.59
TPM1-226ENST00000560959 IGHV1-58A0A0C4DH39 117 aa11.36□□□□□ -0.59
TPM1-226ENST00000560959 NCR2O95944 276 aa11.36□□□□□ -0.59
TPM1-226ENST00000560959 NTF3P20783 257 aa11.35□□□□□ -0.59
TPM1-226ENST00000560959 PTTG1IPP53801 180 aa11.35□□□□□ -0.59
TPM1-226ENST00000560959 SFT2D1Q8WV19 159 aa11.35□□□□□ -0.59
TPM1-226ENST00000560959 CYTL1Q9NRR1 136 aa11.35□□□□□ -0.59
TPM1-226ENST00000560959 A0A0U1RQV1 116 aa11.34□□□□□ -0.59
TPM1-226ENST00000560959 XKRY2A2RUG3 117 aa11.34□□□□□ -0.59
TPM1-226ENST00000560959 RPL35P42766 123 aaKnown RBP11.34□□□□□ -0.59
TPM1-226ENST00000560959 OR2D3Q8NGH3 330 aa11.34□□□□□ -0.59
TPM1-226ENST00000560959 OR5A1Q8NGJ0 315 aa11.34□□□□□ -0.59
TPM1-226ENST00000560959 ZNF25P17030 456 aaPredicted RBP11.33□□□□□ -0.6
TPM1-226ENST00000560959 SYCNQ0VAF6 134 aa11.33□□□□□ -0.6
TPM1-226ENST00000560959 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
TPM1-226ENST00000560959 FGF6P10767 208 aa11.32□□□□□ -0.6
TPM1-226ENST00000560959 RNASEKQ6P5S7 137 aaKnown RBP11.32□□□□□ -0.6
TPM1-226ENST00000560959 TRAV26-2A0A0B4J265 109 aa11.31□□□□□ -0.6
TPM1-226ENST00000560959 LOC107984640A0A0U1RRK4 108 aa11.31□□□□□ -0.6
TPM1-226ENST00000560959 UMAD1C9J7I0 102 aa11.31□□□□□ -0.6
TPM1-226ENST00000560959 ZNF561-AS1K7EIQ3 104 aa11.31□□□□□ -0.6
TPM1-226ENST00000560959 XCL1P47992 114 aa11.31□□□□□ -0.6
TPM1-226ENST00000560959 LYZL1Q6UWQ5 148 aa11.31□□□□□ -0.6
TPM1-226ENST00000560959 C9orf62Q8N4C0 152 aa11.31□□□□□ -0.6
TPM1-226ENST00000560959 SMIM12Q96EX1 92 aa11.31□□□□□ -0.6
TPM1-226ENST00000560959 LINC00959A0A1B0GUT2 108 aa11.3□□□□□ -0.6
TPM1-226ENST00000560959 Q6ZNX1 250 aa11.3□□□□□ -0.6
TPM1-226ENST00000560959 KCNRGQ8N5I3 272 aa11.3□□□□□ -0.6
TPM1-226ENST00000560959 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
TPM1-226ENST00000560959 ISOC2Q96AB3 205 aa11.3□□□□□ -0.6
TPM1-226ENST00000560959 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
TPM1-226ENST00000560959 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.29□□□□□ -0.6
TPM1-226ENST00000560959 A0A1W2PNN7 141 aa11.29□□□□□ -0.6
TPM1-226ENST00000560959 IGKV2-29A2NJV5 120 aaPredicted RBP11.29□□□□□ -0.6
TPM1-226ENST00000560959 CCL25O15444 150 aa11.29□□□□□ -0.6
TPM1-226ENST00000560959 APCSP02743 223 aa11.29□□□□□ -0.6
TPM1-226ENST00000560959 MT-ND6P03923 174 aa11.29□□□□□ -0.6
TPM1-226ENST00000560959 C11orf52Q96A22 123 aa11.29□□□□□ -0.6
TPM1-226ENST00000560959 IFNA1P01562 189 aa11.28□□□□□ -0.6
TPM1-226ENST00000560959 GAGE2BQ13066 116 aa11.28□□□□□ -0.6
TPM1-226ENST00000560959 CD164L2Q6UWJ8 174 aa11.28□□□□□ -0.6
TPM1-226ENST00000560959 FAM213BQ8TBF2 198 aa11.28□□□□□ -0.6
TPM1-226ENST00000560959 BTF3L4Q96K17 158 aa11.28□□□□□ -0.6
TPM1-226ENST00000560959 CNFNQ9BYD5 112 aa11.28□□□□□ -0.6
TPM1-226ENST00000560959 CAMPP49913 170 aa11.27□□□□□ -0.61
TPM1-226ENST00000560959 PRR26Q8N8Z3 221 aa11.27□□□□□ -0.61
TPM1-226ENST00000560959 DIRC1Q969H9 104 aa11.27□□□□□ -0.61
TPM1-226ENST00000560959 TMEM101Q96IK0 257 aa11.27□□□□□ -0.61
TPM1-226ENST00000560959 FAM210AQ96ND0 272 aa11.27□□□□□ -0.61
TPM1-226ENST00000560959 CTRLP40313 264 aa11.26□□□□□ -0.61
TPM1-226ENST00000560959 SS18Q15532 418 aa11.26□□□□□ -0.61
TPM1-226ENST00000560959 CENPWQ5EE01 88 aa11.26□□□□□ -0.61
TPM1-226ENST00000560959 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
TPM1-226ENST00000560959 TEX261Q6UWH6 196 aa11.26□□□□□ -0.61
TPM1-226ENST00000560959 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
TPM1-226ENST00000560959 A0A1B0GV50 99 aa11.25□□□□□ -0.61
TPM1-226ENST00000560959 H2AFB1P0C5Y9 115 aa11.25□□□□□ -0.61
TPM1-226ENST00000560959 TWIST1Q15672 202 aa11.25□□□□□ -0.61
TPM1-226ENST00000560959 C9orf116Q5BN46 136 aaPredicted RBP11.25□□□□□ -0.61
TPM1-226ENST00000560959 BIN3Q9NQY0 253 aa11.25□□□□□ -0.61
TPM1-226ENST00000560959 IGLV1-50A0A075B6I6 118 aa11.24□□□□□ -0.61
TPM1-226ENST00000560959 SDHAF1A6NFY7 115 aa11.24□□□□□ -0.61
TPM1-226ENST00000560959 G3V3Q6 166 aa11.24□□□□□ -0.61
TPM1-226ENST00000560959 ARPC5O15511 151 aa11.24□□□□□ -0.61
TPM1-226ENST00000560959 EIF5AP63241 154 aaKnown RBP11.24□□□□□ -0.61
TPM1-226ENST00000560959 CCL20P78556 96 aa11.24□□□□□ -0.61
TPM1-226ENST00000560959 EIF5AL1Q6IS14 154 aaKnown RBP11.24□□□□□ -0.61
TPM1-226ENST00000560959 NUP35Q8NFH5 326 aa11.24□□□□□ -0.61
TPM1-226ENST00000560959 MANBALQ9NQG1 85 aa11.24□□□□□ -0.61
TPM1-226ENST00000560959 APOMO95445 188 aa11.23□□□□□ -0.61
TPM1-226ENST00000560959 IGLV7-43P04211 117 aa11.23□□□□□ -0.61
TPM1-226ENST00000560959 I3L3M4 83 aa11.22□□□□□ -0.61
TPM1-226ENST00000560959 ESDP10768 282 aa11.22□□□□□ -0.61
TPM1-226ENST00000560959 GNG4P50150 75 aa11.22□□□□□ -0.61
TPM1-226ENST00000560959 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
TPM1-226ENST00000560959 CDC42SE2Q9NRR3 84 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms