RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 ATP6V0E2Q8NHE4 81 aa3.9□□□□□ -1.78
ZEB1-219ENST00000560721 C2CD3Q4AC94 2353 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 AGRNO00468 2067 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 A0A087WWL8 130 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 TRAV26-2A0A0B4J265 109 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 TRAV4A0A0B4J268 109 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 J3QL48 77 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 UBE2D1P51668 147 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 RRN3P1Q2M238 152 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 TMEM61Q8N0U2 210 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 Q8NAQ8 132 aa3.9□□□□□ -1.79
ZEB1-219ENST00000560721 NHP2Q9NX24 153 aaKnown RBP3.9□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3-16A0A0C4DH30 117 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 LOC107984640A0A0U1RRK4 108 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 SUMO2P61956 95 aaKnown RBP3.89□□□□□ -1.79
ZEB1-219ENST00000560721 X6R8D5 127 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 ZNF469Q96JG9 3925 aaPredicted RBP3.89□□□□□ -1.79
ZEB1-219ENST00000560721 ITPR3Q14573 2671 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 TRBV6-4A0A1B0GX49 114 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 A8MWV9 139 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 CRYGDP07320 174 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 LINC00315P59091 139 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 Q6ZQT7 251 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 MAPK1IP1LQ8NDC0 245 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 DPH3P1Q9H4G8 78 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 FLNCQ14315 2725 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 RBMY1BA6NDE4 496 aaKnown RBP3.89□□□□□ -1.79
ZEB1-219ENST00000560721 GAGE12HA6NDE8 117 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 RBMY1EA6NEQ0 496 aaKnown RBP3.89□□□□□ -1.79
ZEB1-219ENST00000560721 RBMY1DP0C7P1 496 aaKnown RBP3.89□□□□□ -1.79
ZEB1-219ENST00000560721 SYNJ2BPP57105 145 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 KRTAP10-11P60412 298 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 UBE2D3P61077 147 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 UBE2D2P62837 147 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 CFAP126Q5VTH2 177 aa3.89□□□□□ -1.79
ZEB1-219ENST00000560721 RNASE3P12724 160 aaKnown RBP3.88□□□□□ -1.79
ZEB1-219ENST00000560721 WFDC2Q14508 124 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 SERTAD4-AS1Q5TG53 156 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 SPANXN1Q5VSR9 72 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 SBSPONQ8IVN8 264 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 PRKDCP78527 4128 aaKnown RBP3.88□□□□□ -1.79
ZEB1-219ENST00000560721 IGLV4-69A0A075B6H9 119 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV1OR15-1A0A075B7D0 117 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 IGIPA6NJ69 53 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 H3BMG7 143 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 TSHBP01222 138 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 CD7P09564 240 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 C15orf53Q8NAA6 179 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 MUC7Q8TAX7 377 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 DYNLRB2Q8TF09 96 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 LINC01600Q96MT4 127 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 HIST1H4GQ99525 98 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3OR16-8A0A075B7F1 116 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 VCYO14598 125 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 POLR2KP53803 58 aaKnown RBP3.88□□□□□ -1.79
ZEB1-219ENST00000560721 GAGE13Q4V321 117 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 MUC4Q99102 2169 aa3.88□□□□□ -1.79
ZEB1-219ENST00000560721 EPM2AB3EWF7 344 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 H3BVH4 76 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 J3QR89 54 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 SPINK8P0C7L1 97 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 PAPPA-AS1Q5QFB9 102 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 C2orf66Q6UXQ4 117 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 C1orf158Q8N1D5 194 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 OR11H2Q8NH07 326 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 SCGB3A1Q96QR1 104 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 PLA2G2DQ9UNK4 145 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3-35A0A0C4DH35 117 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 C3orf84H3BNL1 204 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 M0R2P5 195 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 SMCPP49901 116 aaPredicted RBP3.87□□□□□ -1.79
ZEB1-219ENST00000560721 S100A7L2Q5SY68 101 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 C10orf99Q6UWK7 81 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 AMELXQ99217 191 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 TIMM17AQ99595 171 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 DNAH9Q9NYC9 4486 aa3.87□□□□□ -1.79
ZEB1-219ENST00000560721 RPL39LQ96EH5 51 aaKnown RBP3.86□□□□□ -1.79
ZEB1-219ENST00000560721 ROS1P08922 2347 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3-66A0A0C4DH42 116 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 TRBV27A0A0K0K1C4 114 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 C11orf86A6NJI1 115 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 RPL35AP18077 110 aaKnown RBP3.86□□□□□ -1.79
ZEB1-219ENST00000560721 ASIPP42127 132 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 FOXI1Q12951 378 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 ETDBQ3ZM63 59 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 C18orf65Q6ZTR6 163 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 TMEM141Q96I45 108 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 PRADC1Q9BSG0 188 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 PYGO1Q9Y3Y4 419 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 DNAH17Q9UFH2 4485 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 CHD8Q9HCK8 2581 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 A0A0J9YY99 117 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 MRPS36P82909 103 aaKnown RBP3.86□□□□□ -1.79
ZEB1-219ENST00000560721 TTC32Q5I0X7 151 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
ZEB1-219ENST00000560721 K7EIL1 84 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3-30P01768 117 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 IGHV3-30-5P0DP03 117 aa3.85□□□□□ -1.79
ZEB1-219ENST00000560721 RHOHQ15669 191 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms