RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TMEM78Q5T7P6 136 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 Q6AWC8 147 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 ATOH7Q8N100 152 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 OR8A1Q8NGG7 326 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 OR10AG1Q8NH19 301 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 DCANP1Q8TF63 244 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 CHCHD1Q96BP2 118 aaKnown RBP3.14□□□□□ -1.91
TMOD3-207ENST00000560549 LINC00477Q96M19 166 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 PRELID3AQ96N28 172 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 CNFNQ9BYD5 112 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
TMOD3-207ENST00000560549 DAZ1Q9NQZ3 744 aaKnown RBP3.14□□□□□ -1.91
TMOD3-207ENST00000560549 ANK3Q12955 4377 aaKnown RBP3.13□□□□□ -1.91
TMOD3-207ENST00000560549 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
TMOD3-207ENST00000560549 A6NDN8 102 aa3.13□□□□□ -1.91
TMOD3-207ENST00000560549 NDUFV3P56181 108 aaKnown RBP3.13□□□□□ -1.91
TMOD3-207ENST00000560549 MRPL52Q86TS9 123 aaKnown RBP3.13□□□□□ -1.91
TMOD3-207ENST00000560549 Q8NBF4 154 aa3.13□□□□□ -1.91
TMOD3-207ENST00000560549 OR10J6PQ8NGY7 276 aa3.13□□□□□ -1.91
TMOD3-207ENST00000560549 CHCHD10Q8WYQ3 142 aaPredicted RBP3.13□□□□□ -1.91
TMOD3-207ENST00000560549 C20orf144Q9BQM9 153 aa3.13□□□□□ -1.91
TMOD3-207ENST00000560549 MS4A6AQ9H2W1 248 aa3.13□□□□□ -1.91
TMOD3-207ENST00000560549 UFC1Q9Y3C8 167 aa3.13□□□□□ -1.91
TMOD3-207ENST00000560549 TIMM8BQ9Y5J9 83 aaPredicted RBP3.13□□□□□ -1.91
TMOD3-207ENST00000560549 TRAV26-2A0A0B4J265 109 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 H3BVH4 76 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 LGALS9O00182 355 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 ZNF688P0C7X2 276 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 EVI2AP22794 236 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 DEFA6Q01524 100 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 ORMDL3Q8N138 153 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 BORCS7Q96B45 105 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 UBE2E2Q96LR5 201 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 OPRPNQ99935 248 aaPredicted RBP3.12□□□□□ -1.91
TMOD3-207ENST00000560549 MIEN1Q9BRT3 115 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 VAMP8Q9BV40 100 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 SNHG12Q9BXW3 62 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 TMEM191AQ9H0A3 160 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 TP73-AS1Q9UF72 201 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 LENEPQ9Y5L5 61 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 ZANQ9Y493 2812 aa3.12□□□□□ -1.91
TMOD3-207ENST00000560549 WNK1Q9H4A3 2382 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 IGLV2-18A0A075B6J9 118 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 TRAV21A0A0B4J279 112 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 A0A0J9YX75 114 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
TMOD3-207ENST00000560549 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
TMOD3-207ENST00000560549 LINC01546A6NGU7 62 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 KNCNA6PVL3 124 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 KLLNB2CW77 178 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 EPM2AB3EWF7 344 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 SYS1-DBNDD2H3BUS1 97 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 OR5AL1P0C617 328 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
TMOD3-207ENST00000560549 CD28P10747 220 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 RNASE3P12724 160 aaKnown RBP3.11□□□□□ -1.91
TMOD3-207ENST00000560549 CKS2P33552 79 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 LINC00315P59091 139 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 RPL18AQ02543 176 aaKnown RBP3.11□□□□□ -1.91
TMOD3-207ENST00000560549 SPATA45Q537H7 98 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 PSMG4Q5JS54 123 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 AMTNQ6UX39 209 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 FA2HQ7L5A8 372 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 C6orf223Q8N319 242 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 OR1N2Q8NGR9 330 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 OR2K2Q8NGT1 345 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 ZNF418Q8TF45 676 aaPredicted RBP3.11□□□□□ -1.91
TMOD3-207ENST00000560549 PMCHL2Q9BQD1 86 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 TMEM70Q9BUB7 260 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
TMOD3-207ENST00000560549 RYR1P21817 5038 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 TRAV12-2A0A075B6T6 113 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 TRAV9-2A0A087WT02 112 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 TRAV12-3A0A0B4J271 114 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 A0A1B0GV90 55 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 LINC01619G3V211 115 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 CRXO43186 299 aaPredicted RBP3.1□□□□□ -1.91
TMOD3-207ENST00000560549 TCF21O43680 179 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 LEPROTL1O95214 131 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 PRM2P04554 102 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 RBMY1A1P0DJD3 496 aaKnown RBP3.1□□□□□ -1.91
TMOD3-207ENST00000560549 IGLC3P0DOY3 106 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 IGLL1P15814 213 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 ASIPP42127 132 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 RPL32P62910 135 aaKnown RBP3.1□□□□□ -1.91
TMOD3-207ENST00000560549 CACNG7P62955 275 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 RBMY1FQ15415 496 aaKnown RBP3.1□□□□□ -1.91
TMOD3-207ENST00000560549 LINC01545Q5VT33 79 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 ZNF705AQ6ZN79 300 aaPredicted RBP3.1□□□□□ -1.91
TMOD3-207ENST00000560549 TMEM86BQ8N661 226 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 OR11H1Q8NG94 326 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 KIR2DL5BQ8NHK3 375 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 C2orf88Q9BSF0 95 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 JPT2Q9H910 190 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 KIF25-AS1Q9Y6Z4 181 aa3.1□□□□□ -1.91
TMOD3-207ENST00000560549 IGLV4-3A0A075B6K6 122 aa3.09□□□□□ -1.91
TMOD3-207ENST00000560549 IGHV3-16A0A0C4DH30 117 aa3.09□□□□□ -1.91
TMOD3-207ENST00000560549 C7orf71A4D174 169 aa3.09□□□□□ -1.91
TMOD3-207ENST00000560549 OR4C46A6NHA9 309 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms