RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TOMM6Q96B49 74 aa6.05□□□□□ -1.44
TRAF3-209ENST00000560463 GTSF1LQ9H1H1 148 aa6.05□□□□□ -1.44
TRAF3-209ENST00000560463 Q9UF83 564 aa6.05□□□□□ -1.44
TRAF3-209ENST00000560463 TRAV26-1A0A087WT03 109 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 GAGE12JA6NER3 117 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 F5H768 121 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 ATP5LO75964 103 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 GAGE1Q13065 139 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 GAGE4Q13068 117 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 GAGE5Q13069 117 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 GAGE13Q4V321 117 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 C2orf66Q6UXQ4 117 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 NEGR1Q7Z3B1 354 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 SH2D6Q7Z4S9 175 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 MAP1LC3CQ9BXW4 147 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 CYSLTR1Q9Y271 337 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 STAB2Q8WWQ8 2551 aa6.04□□□□□ -1.44
TRAF3-209ENST00000560463 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.03□□□□□ -1.44
TRAF3-209ENST00000560463 NPSP0C0P6 89 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 GYPEP15421 78 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 DEFA6Q01524 100 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 SMAGPQ0VAQ4 97 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 MRPL23Q16540 153 aaKnown RBP6.03□□□□□ -1.44
TRAF3-209ENST00000560463 Q6ZTC4 211 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 ERASQ7Z444 233 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 C20orf203Q8NBC4 194 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 PHLDA1Q8WV24 401 aaPredicted RBP6.03□□□□□ -1.44
TRAF3-209ENST00000560463 IFI27L1Q96BM0 104 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 VSIG2Q96IQ7 327 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
TRAF3-209ENST00000560463 TRBV25-1A0A075B6N4 114 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 LOC100131303A0A0U1RQF7 123 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 H7C423 109 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 C3orf79P0CE67 100 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 HTN3P15516 51 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 NANOS2P60321 138 aaKnown RBP6.02□□□□□ -1.45
TRAF3-209ENST00000560463 JOSD1Q15040 202 aaPredicted RBP6.02□□□□□ -1.45
TRAF3-209ENST00000560463 PET117Q6UWS5 81 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 SPATA12Q7Z6I5 190 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 ATP6V0E2Q8NHE4 81 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 SCGB3A1Q96QR1 104 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 TIMM17AQ99595 171 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 PYGO1Q9Y3Y4 419 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
TRAF3-209ENST00000560463 DEFB131BA0A096LNP1 70 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 TRAV10A0A0B4J240 114 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 IGHV3-38A0A0C4DH36 116 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 A0A0J9YY99 117 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 SYS1-DBNDD2H3BUS1 97 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 SMIM6P0DI80 62 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 KRTDAPP60985 99 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 PAPPA-AS1Q5QFB9 102 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 Q6ZN92 141 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 CHCHD7Q9BUK0 85 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 TIMM21Q9BVV7 248 aa6.01□□□□□ -1.45
TRAF3-209ENST00000560463 TRBV6-8A0A0A6YYG3 113 aa6□□□□□ -1.45
TRAF3-209ENST00000560463 C20orf202A1L168 122 aa6□□□□□ -1.45
TRAF3-209ENST00000560463 IGIPA6NJ69 53 aa6□□□□□ -1.45
TRAF3-209ENST00000560463 SCGB1D1O95968 90 aa6□□□□□ -1.45
TRAF3-209ENST00000560463 RPL39P62891 51 aaKnown RBP6□□□□□ -1.45
TRAF3-209ENST00000560463 NTM-AS1Q6ZSK4 140 aa6□□□□□ -1.45
TRAF3-209ENST00000560463 LINC00173Q6ZV60 143 aa6□□□□□ -1.45
TRAF3-209ENST00000560463 SPANXA1Q9NS26 97 aa6□□□□□ -1.45
TRAF3-209ENST00000560463 DYNC2H1Q8NCM8 4307 aaKnown RBP6□□□□□ -1.45
TRAF3-209ENST00000560463 DNAH7Q8WXX0 4024 aa6□□□□□ -1.45
TRAF3-209ENST00000560463 A0A096LPF7 62 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 TRAV12-1A0A0B4J245 112 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 UBE2L6O14933 153 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 PRSS1P07477 247 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 PYY3Q5JQD4 70 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 LGALS9CQ6DKI2 356 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 MRPL52Q86TS9 123 aaKnown RBP5.99□□□□□ -1.45
TRAF3-209ENST00000560463 C15orf53Q8NAA6 179 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 DEFB104AQ8WTQ1 72 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 TMEM243Q9BU79 118 aa5.99□□□□□ -1.45
TRAF3-209ENST00000560463 CSDC2Q9Y534 153 aaKnown RBP5.99□□□□□ -1.45
TRAF3-209ENST00000560463 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.98□□□□□ -1.45
TRAF3-209ENST00000560463 IGKV2-29A2NJV5 120 aaPredicted RBP5.98□□□□□ -1.45
TRAF3-209ENST00000560463 ZNF25P17030 456 aaPredicted RBP5.98□□□□□ -1.45
TRAF3-209ENST00000560463 TIRAPP58753 221 aa5.98□□□□□ -1.45
TRAF3-209ENST00000560463 PKIAP61925 76 aa5.98□□□□□ -1.45
TRAF3-209ENST00000560463 LINC01545Q5VT33 79 aa5.98□□□□□ -1.45
TRAF3-209ENST00000560463 UBE2D4Q9Y2X8 147 aa5.98□□□□□ -1.45
TRAF3-209ENST00000560463 A0A087WX48 190 aa5.97□□□□□ -1.45
TRAF3-209ENST00000560463 MRPS36P82909 103 aaKnown RBP5.97□□□□□ -1.45
TRAF3-209ENST00000560463 PMVKQ15126 192 aa5.97□□□□□ -1.45
TRAF3-209ENST00000560463 DGAT2L7PQ6IED9 249 aa5.97□□□□□ -1.45
TRAF3-209ENST00000560463 LINC00518Q8N0U6 118 aa5.97□□□□□ -1.45
TRAF3-209ENST00000560463 Q8N976 141 aa5.97□□□□□ -1.45
TRAF3-209ENST00000560463 BAALCQ8WXS3 180 aa5.97□□□□□ -1.45
TRAF3-209ENST00000560463 TMEM101Q96IK0 257 aa5.97□□□□□ -1.45
TRAF3-209ENST00000560463 IGLV4-3A0A075B6K6 122 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 A0A1B0GUV1 79 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 H0Y8G0 127 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 FGF6P10767 208 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 S100A12P80511 92 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 ODF1Q14990 250 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 LELP1Q5T871 98 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 AMMECR1LQ6DCA0 310 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms