RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 NDUFS6O75380 124 aaKnown RBP9.21□□□□□ -0.94
TPM1-223ENST00000560445 AMTP48728 403 aa9.21□□□□□ -0.94
TPM1-223ENST00000560445 REG3AQ06141 175 aa9.21□□□□□ -0.94
TPM1-223ENST00000560445 DEFB104AQ8WTQ1 72 aa9.21□□□□□ -0.94
TPM1-223ENST00000560445 FAM210AQ96ND0 272 aa9.21□□□□□ -0.94
TPM1-223ENST00000560445 GATCO43716 136 aaKnown RBP9.2□□□□□ -0.94
TPM1-223ENST00000560445 NCR2O95944 276 aa9.2□□□□□ -0.94
TPM1-223ENST00000560445 CT83Q5H943 113 aa9.2□□□□□ -0.94
TPM1-223ENST00000560445 SCXQ7RTU7 201 aa9.2□□□□□ -0.94
TPM1-223ENST00000560445 AP5S1Q9NUS5 200 aa9.2□□□□□ -0.94
TPM1-223ENST00000560445 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.19□□□□□ -0.94
TPM1-223ENST00000560445 K7EN84 100 aa9.19□□□□□ -0.94
TPM1-223ENST00000560445 FAM231DQ6ZW35 169 aa9.19□□□□□ -0.94
TPM1-223ENST00000560445 H7C423 109 aa9.18□□□□□ -0.94
TPM1-223ENST00000560445 J3QL48 77 aa9.18□□□□□ -0.94
TPM1-223ENST00000560445 FLG2Q5D862 2391 aaPredicted RBP9.18□□□□□ -0.94
TPM1-223ENST00000560445 CFAP161Q6P656 301 aa9.18□□□□□ -0.94
TPM1-223ENST00000560445 CLPSL2Q6UWE3 100 aa9.18□□□□□ -0.94
TPM1-223ENST00000560445 SMIM7Q9BQ49 75 aa9.18□□□□□ -0.94
TPM1-223ENST00000560445 LINC01620Q4KN68 170 aa9.17□□□□□ -0.94
TPM1-223ENST00000560445 AMMECR1LQ6DCA0 310 aa9.17□□□□□ -0.94
TPM1-223ENST00000560445 FAT1Q14517 4588 aa9.16□□□□□ -0.94
TPM1-223ENST00000560445 ZNF727A8MUV8 499 aa9.16□□□□□ -0.94
TPM1-223ENST00000560445 APCSP02743 223 aa9.16□□□□□ -0.94
TPM1-223ENST00000560445 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
TPM1-223ENST00000560445 hDV102S1A0JD36 115 aa9.15□□□□□ -0.94
TPM1-223ENST00000560445 FAM231BA6NCW3 169 aa9.15□□□□□ -0.94
TPM1-223ENST00000560445 PRSS1P07477 247 aa9.15□□□□□ -0.94
TPM1-223ENST00000560445 ZNF25P17030 456 aaPredicted RBP9.15□□□□□ -0.94
TPM1-223ENST00000560445 CNBPP62633 177 aaKnown RBP9.15□□□□□ -0.94
TPM1-223ENST00000560445 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
TPM1-223ENST00000560445 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
TPM1-223ENST00000560445 GTSF1Q8WW33 167 aa9.15□□□□□ -0.94
TPM1-223ENST00000560445 GFRA4Q9GZZ7 299 aa9.15□□□□□ -0.94
TPM1-223ENST00000560445 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
TPM1-223ENST00000560445 IGLV10-54A0A075B6I4 117 aa9.14□□□□□ -0.95
TPM1-223ENST00000560445 FOXA3P55318 350 aaPredicted RBP9.14□□□□□ -0.95
TPM1-223ENST00000560445 GATD1Q8NB37 220 aa9.14□□□□□ -0.95
TPM1-223ENST00000560445 BTF3L4Q96K17 158 aa9.14□□□□□ -0.95
TPM1-223ENST00000560445 VPS13BQ7Z7G8 4022 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 IGHV3-64A0A075B6Q5 118 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 A0A1B0GUT8 65 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 A0A1B0GVG6 124 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 PPP1R17O96001 155 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 FAM74A3Q4VXF1 159 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 LINC01551Q86U37 167 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 TSKUQ8WUA8 353 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 TMEM101Q96IK0 257 aa9.13□□□□□ -0.95
TPM1-223ENST00000560445 SDHAF1A6NFY7 115 aa9.12□□□□□ -0.95
TPM1-223ENST00000560445 I3L3M4 83 aa9.12□□□□□ -0.95
TPM1-223ENST00000560445 SRP19P09132 144 aaKnown RBP9.12□□□□□ -0.95
TPM1-223ENST00000560445 TMEM241Q24JQ0 296 aa9.12□□□□□ -0.95
TPM1-223ENST00000560445 RNASEKQ6P5S7 137 aaKnown RBP9.12□□□□□ -0.95
TPM1-223ENST00000560445 KRTAP26-1Q6PEX3 210 aa9.12□□□□□ -0.95
TPM1-223ENST00000560445 OSTCQ9NRP0 149 aa9.12□□□□□ -0.95
TPM1-223ENST00000560445 IGLV4-60A0A075B6I1 120 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 TRAV26-2A0A0B4J265 109 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 TRBV6-5A0A0K0K1A5 114 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 HIGD1CA8MV81 97 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 KRTAP29-1A8MX34 341 aaPredicted RBP9.11□□□□□ -0.95
TPM1-223ENST00000560445 PMCHP20382 165 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 PEA15Q15121 130 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 MRAP2Q96G30 205 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 RNF185Q96GF1 192 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 ST20Q9HBF5 79 aa9.11□□□□□ -0.95
TPM1-223ENST00000560445 RPL37AP61513 92 aaKnown RBP9.1□□□□□ -0.95
TPM1-223ENST00000560445 RIGQ13278 110 aa9.1□□□□□ -0.95
TPM1-223ENST00000560445 TMEM191AQ9H0A3 160 aa9.1□□□□□ -0.95
TPM1-223ENST00000560445 SMDT1Q9H4I9 107 aa9.1□□□□□ -0.95
TPM1-223ENST00000560445 FGF6P10767 208 aa9.09□□□□□ -0.95
TPM1-223ENST00000560445 RPL39LQ96EH5 51 aaKnown RBP9.09□□□□□ -0.95
TPM1-223ENST00000560445 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
TPM1-223ENST00000560445 GAGE12HA6NDE8 117 aa9.08□□□□□ -0.96
TPM1-223ENST00000560445 OXTP01178 125 aa9.08□□□□□ -0.96
TPM1-223ENST00000560445 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
TPM1-223ENST00000560445 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
TPM1-223ENST00000560445 DPH3Q96FX2 82 aa9.08□□□□□ -0.96
TPM1-223ENST00000560445 NAT8Q9UHE5 227 aa9.08□□□□□ -0.96
TPM1-223ENST00000560445 IGKV3OR2-268A0A0C4DH90 116 aa9.07□□□□□ -0.96
TPM1-223ENST00000560445 SDIM1Q6ZPB5 146 aa9.07□□□□□ -0.96
TPM1-223ENST00000560445 CHCHD10Q8WYQ3 142 aaPredicted RBP9.07□□□□□ -0.96
TPM1-223ENST00000560445 NAT8BQ9UHF3 227 aa9.07□□□□□ -0.96
TPM1-223ENST00000560445 DNAH8Q96JB1 4490 aa9.06□□□□□ -0.96
TPM1-223ENST00000560445 A0A1B0GW15 77 aa9.06□□□□□ -0.96
TPM1-223ENST00000560445 PPP1R2P9O14990 202 aa9.06□□□□□ -0.96
TPM1-223ENST00000560445 FCER1GP30273 86 aa9.06□□□□□ -0.96
TPM1-223ENST00000560445 RPS10P46783 165 aaKnown RBP9.06□□□□□ -0.96
TPM1-223ENST00000560445 ADIRFQ15847 76 aa9.06□□□□□ -0.96
TPM1-223ENST00000560445 ISOC2Q96AB3 205 aa9.06□□□□□ -0.96
TPM1-223ENST00000560445 HERC1Q15751 4861 aa9.06□□□□□ -0.96
TPM1-223ENST00000560445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.05□□□□□ -0.96
TPM1-223ENST00000560445 TRBV27A0A0K0K1C4 114 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 IGKV2-29A2NJV5 120 aaPredicted RBP9.05□□□□□ -0.96
TPM1-223ENST00000560445 C7orf77A4D0Y5 90 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 VCYO14598 125 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 TCAPO15273 167 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 CCL25O15444 150 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 S100A8P05109 93 aa9.05□□□□□ -0.96
TPM1-223ENST00000560445 RPL23P62829 140 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms