RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 IGLV5-52A0A0A0MRZ9 124 aa8.68□□□□□ -1.02
SMAD3-213ENST00000560175 ANGP03950 147 aaKnown RBP8.68□□□□□ -1.02
SMAD3-213ENST00000560175 GAGE6Q13070 117 aa8.68□□□□□ -1.02
SMAD3-213ENST00000560175 C20orf203Q8NBC4 194 aa8.68□□□□□ -1.02
SMAD3-213ENST00000560175 RNF185Q96GF1 192 aa8.68□□□□□ -1.02
SMAD3-213ENST00000560175 TMEM243Q9BU79 118 aa8.68□□□□□ -1.02
SMAD3-213ENST00000560175 FAT1Q14517 4588 aa8.68□□□□□ -1.02
SMAD3-213ENST00000560175 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
SMAD3-213ENST00000560175 NCR2O95944 276 aa8.67□□□□□ -1.02
SMAD3-213ENST00000560175 RAB4AP20338 218 aa8.67□□□□□ -1.02
SMAD3-213ENST00000560175 COTL1Q14019 142 aa8.67□□□□□ -1.02
SMAD3-213ENST00000560175 ABCA13Q86UQ4 5058 aa8.67□□□□□ -1.02
SMAD3-213ENST00000560175 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
SMAD3-213ENST00000560175 TMEM70Q9BUB7 260 aa8.67□□□□□ -1.02
SMAD3-213ENST00000560175 C1orf43Q9BWL3 253 aa8.67□□□□□ -1.02
SMAD3-213ENST00000560175 GAS8-AS1O95177 125 aa8.66□□□□□ -1.02
SMAD3-213ENST00000560175 POLR2KP53803 58 aaKnown RBP8.66□□□□□ -1.02
SMAD3-213ENST00000560175 LINC00269Q8N2A0 174 aa8.66□□□□□ -1.02
SMAD3-213ENST00000560175 BORCS7Q96B45 105 aa8.66□□□□□ -1.02
SMAD3-213ENST00000560175 NAT8BQ9UHF3 227 aa8.66□□□□□ -1.02
SMAD3-213ENST00000560175 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 H7C423 109 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 LECT2O14960 151 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 CRPP02741 224 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 RIGQ13278 110 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 ADIRFQ15847 76 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 Q6ZSA8 131 aa8.65□□□□□ -1.02
SMAD3-213ENST00000560175 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
SMAD3-213ENST00000560175 AMTP48728 403 aa8.64□□□□□ -1.03
SMAD3-213ENST00000560175 REG3AQ06141 175 aa8.64□□□□□ -1.03
SMAD3-213ENST00000560175 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
SMAD3-213ENST00000560175 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
SMAD3-213ENST00000560175 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
SMAD3-213ENST00000560175 I3L3M4 83 aa8.63□□□□□ -1.03
SMAD3-213ENST00000560175 ESDP10768 282 aa8.63□□□□□ -1.03
SMAD3-213ENST00000560175 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
SMAD3-213ENST00000560175 A0A1B0GW15 77 aa8.62□□□□□ -1.03
SMAD3-213ENST00000560175 RPS10P46783 165 aaKnown RBP8.62□□□□□ -1.03
SMAD3-213ENST00000560175 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
SMAD3-213ENST00000560175 CLLU1Q5K131 121 aa8.62□□□□□ -1.03
SMAD3-213ENST00000560175 FAM104BQ5XKR9 115 aa8.62□□□□□ -1.03
SMAD3-213ENST00000560175 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
SMAD3-213ENST00000560175 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-213ENST00000560175 UBE2L6O14933 153 aa8.61□□□□□ -1.03
SMAD3-213ENST00000560175 TSHBP01222 138 aa8.61□□□□□ -1.03
SMAD3-213ENST00000560175 NRACQ8N912 160 aa8.61□□□□□ -1.03
SMAD3-213ENST00000560175 ST20Q9HBF5 79 aa8.61□□□□□ -1.03
SMAD3-213ENST00000560175 TRBV24-1A0A075B6N3 115 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 LINC00862A6NCI5 91 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 USP17L23D6RBM5 183 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 PPP1R17O96001 155 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 APCSP02743 223 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 PMCHP20382 165 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 RAB14P61106 215 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 DGAT2L7PQ6IED9 249 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 CLPSL2Q6UWE3 100 aa8.6□□□□□ -1.03
SMAD3-213ENST00000560175 PRSS1P07477 247 aa8.59□□□□□ -1.03
SMAD3-213ENST00000560175 ZNF25P17030 456 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-213ENST00000560175 IFITM2Q01629 132 aa8.59□□□□□ -1.03
SMAD3-213ENST00000560175 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
SMAD3-213ENST00000560175 VCYO14598 125 aa8.58□□□□□ -1.04
SMAD3-213ENST00000560175 FGF6P10767 208 aa8.58□□□□□ -1.04
SMAD3-213ENST00000560175 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
SMAD3-213ENST00000560175 PNRC1Q12796 327 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-213ENST00000560175 MRPL52Q86TS9 123 aaKnown RBP8.58□□□□□ -1.04
SMAD3-213ENST00000560175 CLRN3Q8NCR9 226 aa8.58□□□□□ -1.04
SMAD3-213ENST00000560175 IGLV10-54A0A075B6I4 117 aa8.57□□□□□ -1.04
SMAD3-213ENST00000560175 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-213ENST00000560175 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-213ENST00000560175 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
SMAD3-213ENST00000560175 SMKR1H3BMG3 65 aa8.57□□□□□ -1.04
SMAD3-213ENST00000560175 PPP1R2P9O14990 202 aa8.57□□□□□ -1.04
SMAD3-213ENST00000560175 HLA-DQA1P01909 254 aa8.57□□□□□ -1.04
SMAD3-213ENST00000560175 SUMO2P61956 95 aaKnown RBP8.57□□□□□ -1.04
SMAD3-213ENST00000560175 C20orf78Q9BR46 151 aa8.57□□□□□ -1.04
SMAD3-213ENST00000560175 S100A8P05109 93 aa8.56□□□□□ -1.04
SMAD3-213ENST00000560175 CAMPP49913 170 aa8.56□□□□□ -1.04
SMAD3-213ENST00000560175 HBBP68871 147 aa8.56□□□□□ -1.04
SMAD3-213ENST00000560175 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
SMAD3-213ENST00000560175 ATP5L2Q7Z4Y8 100 aa8.56□□□□□ -1.04
SMAD3-213ENST00000560175 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
SMAD3-213ENST00000560175 ANAPC16Q96DE5 110 aa8.56□□□□□ -1.04
SMAD3-213ENST00000560175 TMEM242Q9NWH2 141 aa8.56□□□□□ -1.04
SMAD3-213ENST00000560175 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
SMAD3-213ENST00000560175 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
SMAD3-213ENST00000560175 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
SMAD3-213ENST00000560175 OR5A1Q8NGJ0 315 aa8.55□□□□□ -1.04
SMAD3-213ENST00000560175 CDC42SE2Q9NRR3 84 aa8.55□□□□□ -1.04
SMAD3-213ENST00000560175 F8W036 122 aa8.54□□□□□ -1.04
SMAD3-213ENST00000560175 PHOX2AO14813 284 aa8.54□□□□□ -1.04
SMAD3-213ENST00000560175 SMR3BP02814 79 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-213ENST00000560175 CNBPP62633 177 aaKnown RBP8.54□□□□□ -1.04
SMAD3-213ENST00000560175 HAMPP81172 84 aa8.54□□□□□ -1.04
SMAD3-213ENST00000560175 Q5VSD8 79 aa8.54□□□□□ -1.04
SMAD3-213ENST00000560175 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
SMAD3-213ENST00000560175 UQCC3Q6UW78 93 aa8.54□□□□□ -1.04
SMAD3-213ENST00000560175 CHAC1Q9BUX1 264 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms