RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 GATD1Q8NB37 220 aa13.29□□□□□ -0.28
CHRNA3-207ENST00000559941 GTSF1Q8WW33 167 aa13.29□□□□□ -0.28
CHRNA3-207ENST00000559941 GATCO43716 136 aaKnown RBP13.28□□□□□ -0.28
CHRNA3-207ENST00000559941 PRSS1P07477 247 aa13.28□□□□□ -0.28
CHRNA3-207ENST00000559941 IGLV4-60A0A075B6I1 120 aa13.27□□□□□ -0.29
CHRNA3-207ENST00000559941 COTL1Q14019 142 aa13.27□□□□□ -0.29
CHRNA3-207ENST00000559941 DGAT2L7PQ6IED9 249 aa13.27□□□□□ -0.29
CHRNA3-207ENST00000559941 DEFB104AQ8WTQ1 72 aa13.27□□□□□ -0.29
CHRNA3-207ENST00000559941 TRAV8-4A0A0B4J246 113 aa13.26□□□□□ -0.29
CHRNA3-207ENST00000559941 CIRBP-AS1Q8TBR5 109 aa13.26□□□□□ -0.29
CHRNA3-207ENST00000559941 IGLV10-54A0A075B6I4 117 aa13.25□□□□□ -0.29
CHRNA3-207ENST00000559941 TRAV26-2A0A0B4J265 109 aa13.25□□□□□ -0.29
CHRNA3-207ENST00000559941 A8MWL6 223 aa13.25□□□□□ -0.29
CHRNA3-207ENST00000559941 NDUFS6O75380 124 aaKnown RBP13.25□□□□□ -0.29
CHRNA3-207ENST00000559941 AMTP48728 403 aa13.25□□□□□ -0.29
CHRNA3-207ENST00000559941 SMIM15Q7Z3B0 74 aa13.25□□□□□ -0.29
CHRNA3-207ENST00000559941 GFRA4Q9GZZ7 299 aa13.25□□□□□ -0.29
CHRNA3-207ENST00000559941 UBE2L6O14933 153 aa13.24□□□□□ -0.29
CHRNA3-207ENST00000559941 CEBPGP53567 150 aa13.24□□□□□ -0.29
CHRNA3-207ENST00000559941 FOXA3P55318 350 aaPredicted RBP13.24□□□□□ -0.29
CHRNA3-207ENST00000559941 CT83Q5H943 113 aa13.23□□□□□ -0.29
CHRNA3-207ENST00000559941 C9orf163Q8N9P6 203 aa13.23□□□□□ -0.29
CHRNA3-207ENST00000559941 CLRN3Q8NCR9 226 aa13.23□□□□□ -0.29
CHRNA3-207ENST00000559941 EIF5A2Q9GZV4 153 aaKnown RBP13.23□□□□□ -0.29
CHRNA3-207ENST00000559941 TEX261Q6UWH6 196 aa13.22□□□□□ -0.29
CHRNA3-207ENST00000559941 RPL39LQ96EH5 51 aaKnown RBP13.22□□□□□ -0.29
CHRNA3-207ENST00000559941 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
CHRNA3-207ENST00000559941 NCR2O95944 276 aa13.21□□□□□ -0.29
CHRNA3-207ENST00000559941 SMIM7Q9BQ49 75 aa13.21□□□□□ -0.29
CHRNA3-207ENST00000559941 LINC01551Q86U37 167 aa13.2□□□□□ -0.3
CHRNA3-207ENST00000559941 SDHAF1A6NFY7 115 aa13.18□□□□□ -0.3
CHRNA3-207ENST00000559941 SRP19P09132 144 aaKnown RBP13.18□□□□□ -0.3
CHRNA3-207ENST00000559941 KRTAP10-4P60372 401 aaPredicted RBP13.18□□□□□ -0.3
CHRNA3-207ENST00000559941 TSKUQ8WUA8 353 aa13.18□□□□□ -0.3
CHRNA3-207ENST00000559941 BORCS7Q96B45 105 aa13.18□□□□□ -0.3
CHRNA3-207ENST00000559941 OSTCQ9NRP0 149 aa13.18□□□□□ -0.3
CHRNA3-207ENST00000559941 ZNF727A8MUV8 499 aa13.17□□□□□ -0.3
CHRNA3-207ENST00000559941 CNBPP62633 177 aaKnown RBP13.17□□□□□ -0.3
CHRNA3-207ENST00000559941 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
CHRNA3-207ENST00000559941 A0A1B0GUT8 65 aa13.16□□□□□ -0.3
CHRNA3-207ENST00000559941 hDV102S1A0JD36 115 aa13.16□□□□□ -0.3
CHRNA3-207ENST00000559941 FAM231BA6NCW3 169 aa13.16□□□□□ -0.3
CHRNA3-207ENST00000559941 H7C423 109 aa13.16□□□□□ -0.3
CHRNA3-207ENST00000559941 APCSP02743 223 aa13.16□□□□□ -0.3
CHRNA3-207ENST00000559941 SDIM1Q6ZPB5 146 aa13.16□□□□□ -0.3
CHRNA3-207ENST00000559941 A0A1B0GVG6 124 aa13.15□□□□□ -0.3
CHRNA3-207ENST00000559941 HIGD1CA8MV81 97 aa13.15□□□□□ -0.3
CHRNA3-207ENST00000559941 AMMECR1LQ6DCA0 310 aa13.15□□□□□ -0.3
CHRNA3-207ENST00000559941 TMEM191AQ9H0A3 160 aa13.15□□□□□ -0.3
CHRNA3-207ENST00000559941 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-207ENST00000559941 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-207ENST00000559941 KRTAP29-1A8MX34 341 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-207ENST00000559941 I3L3M4 83 aa13.14□□□□□ -0.31
CHRNA3-207ENST00000559941 J3QL48 77 aa13.14□□□□□ -0.31
CHRNA3-207ENST00000559941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-207ENST00000559941 LRP1Q07954 4544 aaKnown RBP13.13□□□□□ -0.31
CHRNA3-207ENST00000559941 GAGE12HA6NDE8 117 aa13.13□□□□□ -0.31
CHRNA3-207ENST00000559941 GAS8-AS1O95177 125 aa13.13□□□□□ -0.31
CHRNA3-207ENST00000559941 PMCHP20382 165 aa13.13□□□□□ -0.31
CHRNA3-207ENST00000559941 RNASEKQ6P5S7 137 aaKnown RBP13.13□□□□□ -0.31
CHRNA3-207ENST00000559941 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
CHRNA3-207ENST00000559941 IGKV3OR2-268A0A0C4DH90 116 aa13.12□□□□□ -0.31
CHRNA3-207ENST00000559941 PANO1I0J062 215 aa13.12□□□□□ -0.31
CHRNA3-207ENST00000559941 SLPIP03973 132 aa13.12□□□□□ -0.31
CHRNA3-207ENST00000559941 FGF6P10767 208 aa13.12□□□□□ -0.31
CHRNA3-207ENST00000559941 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
CHRNA3-207ENST00000559941 ST20Q9HBF5 79 aa13.12□□□□□ -0.31
CHRNA3-207ENST00000559941 V9GYV3 84 aa13.12□□□□□ -0.31
CHRNA3-207ENST00000559941 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.11□□□□□ -0.31
CHRNA3-207ENST00000559941 RAB4AP20338 218 aa13.11□□□□□ -0.31
CHRNA3-207ENST00000559941 CFAP161Q6P656 301 aa13.11□□□□□ -0.31
CHRNA3-207ENST00000559941 FAT3Q8TDW7 4589 aa13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 ESDP10768 282 aa13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 ZNF25P17030 456 aaPredicted RBP13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 TMEM241Q24JQ0 296 aa13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 FAM74A3Q4VXF1 159 aa13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 C15orf56Q8N910 161 aa13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 ISOC2Q96AB3 205 aa13.1□□□□□ -0.31
CHRNA3-207ENST00000559941 IGHV3-64A0A075B6Q5 118 aa13.09□□□□□ -0.31
CHRNA3-207ENST00000559941 TSHBP01222 138 aa13.09□□□□□ -0.31
CHRNA3-207ENST00000559941 AMN1Q8IY45 258 aa13.09□□□□□ -0.31
CHRNA3-207ENST00000559941 CHCHD10Q8WYQ3 142 aaPredicted RBP13.09□□□□□ -0.31
CHRNA3-207ENST00000559941 MRAP2Q96G30 205 aa13.09□□□□□ -0.31
CHRNA3-207ENST00000559941 RPL37AP61513 92 aaKnown RBP13.08□□□□□ -0.32
CHRNA3-207ENST00000559941 RPL23P62829 140 aaKnown RBP13.08□□□□□ -0.32
CHRNA3-207ENST00000559941 RIGQ13278 110 aa13.08□□□□□ -0.32
CHRNA3-207ENST00000559941 NUP35Q8NFH5 326 aa13.08□□□□□ -0.32
CHRNA3-207ENST00000559941 OR5A1Q8NGJ0 315 aa13.08□□□□□ -0.32
CHRNA3-207ENST00000559941 BTF3L4Q96K17 158 aa13.08□□□□□ -0.32
CHRNA3-207ENST00000559941 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
CHRNA3-207ENST00000559941 TRBV27A0A0K0K1C4 114 aa13.07□□□□□ -0.32
CHRNA3-207ENST00000559941 RPS10P46783 165 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-207ENST00000559941 TMEM101Q96IK0 257 aa13.07□□□□□ -0.32
CHRNA3-207ENST00000559941 PKHD1L1Q86WI1 4243 aa13.07□□□□□ -0.32
CHRNA3-207ENST00000559941 C9JQL5 133 aa13.06□□□□□ -0.32
CHRNA3-207ENST00000559941 NAT8Q9UHE5 227 aa13.05□□□□□ -0.32
CHRNA3-207ENST00000559941 NAT8BQ9UHF3 227 aa13.05□□□□□ -0.32
CHRNA3-207ENST00000559941 FOXI1Q12951 378 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms