RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 HIST2H2BCQ6DN03 193 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 SLC25A29Q8N8R3 303 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 TNFRSF18Q9Y5U5 241 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-216ENST00000559819 IGKV2-29A2NJV5 120 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-216ENST00000559819 ADARB2-AS1A8MUL3 147 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 LEPROTO15243 131 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 NDUFA11Q86Y39 141 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 CFC1BP0CG36 223 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 CFC1P0CG37 223 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 AZU1P20160 251 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 PSMB2P49721 201 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 WFDC11Q8NEX6 87 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 SPXQ9BT56 116 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 SONP18583 2426 aaKnown RBP7.29□□□□□ -1.24
LRRC28-216ENST00000559819 IGHV3OR16-12A0A075B7B8 117 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 A8MWV9 139 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 LRRC75A-AS1Q8N1F1 130 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 RAX2Q96IS3 184 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 XCL2Q9UBD3 114 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 NACAE9PAV3 2078 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 TRAV2A0A0B4J234 112 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 EIF4EBP3O60516 100 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-216ENST00000559819 CHCHD7Q9BUK0 85 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 EDA2RQ9HAV5 297 aa7.29□□□□□ -1.24
LRRC28-216ENST00000559819 EPG5Q9HCE0 2579 aa7.28□□□□□ -1.24
LRRC28-216ENST00000559819 TRAV8-3A0A0A6YYJ7 113 aa7.28□□□□□ -1.24
LRRC28-216ENST00000559819 INSL3P51460 131 aa7.28□□□□□ -1.24
LRRC28-216ENST00000559819 ODF3L2Q3SX64 289 aa7.28□□□□□ -1.24
LRRC28-216ENST00000559819 C10orf126Q8N4M7 172 aa7.28□□□□□ -1.24
LRRC28-216ENST00000559819 DNAJC9-AS1A6NH13 148 aa7.28□□□□□ -1.24
LRRC28-216ENST00000559819 INSP01308 110 aa7.28□□□□□ -1.24
LRRC28-216ENST00000559819 SMCPP49901 116 aaPredicted RBP7.28□□□□□ -1.24
LRRC28-216ENST00000559819 LINC00467Q9BRT7 94 aa7.28□□□□□ -1.24
LRRC28-216ENST00000559819 A8MZ25 164 aa7.27□□□□□ -1.25
LRRC28-216ENST00000559819 ESM1Q9NQ30 184 aa7.27□□□□□ -1.25
LRRC28-216ENST00000559819 A4D1N5 150 aa7.27□□□□□ -1.25
LRRC28-216ENST00000559819 UBE2D3P61077 147 aa7.27□□□□□ -1.25
LRRC28-216ENST00000559819 UBE2D2P62837 147 aa7.27□□□□□ -1.25
LRRC28-216ENST00000559819 Q6ZUT4 128 aa7.27□□□□□ -1.25
LRRC28-216ENST00000559819 MUSTN1Q8IVN3 82 aa7.27□□□□□ -1.25
LRRC28-216ENST00000559819 PYGO1Q9Y3Y4 419 aa7.27□□□□□ -1.25
LRRC28-216ENST00000559819 APCP25054 2843 aa7.26□□□□□ -1.25
LRRC28-216ENST00000559819 IGHV3-30-3P0DP02 117 aa7.26□□□□□ -1.25
LRRC28-216ENST00000559819 ZNF418Q8TF45 676 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-216ENST00000559819 UBE2D4Q9Y2X8 147 aa7.26□□□□□ -1.25
LRRC28-216ENST00000559819 TSSC4Q9Y5U2 329 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-216ENST00000559819 ITPR3Q14573 2671 aa7.26□□□□□ -1.25
LRRC28-216ENST00000559819 TCL1BO95988 128 aa7.26□□□□□ -1.25
LRRC28-216ENST00000559819 C1orf158Q8N1D5 194 aa7.26□□□□□ -1.25
LRRC28-216ENST00000559819 TIMM21Q9BVV7 248 aa7.26□□□□□ -1.25
LRRC28-216ENST00000559819 CHD6Q8TD26 2715 aa7.26□□□□□ -1.25
LRRC28-216ENST00000559819 A0A0J9YXY3 114 aa7.25□□□□□ -1.25
LRRC28-216ENST00000559819 H7C2G1 150 aa7.25□□□□□ -1.25
LRRC28-216ENST00000559819 RS1O15537 224 aa7.25□□□□□ -1.25
LRRC28-216ENST00000559819 SPINK8P0C7L1 97 aa7.25□□□□□ -1.25
LRRC28-216ENST00000559819 MRPS36P82909 103 aaKnown RBP7.25□□□□□ -1.25
LRRC28-216ENST00000559819 IGHV3-53P01767 116 aa7.25□□□□□ -1.25
LRRC28-216ENST00000559819 PTH2Q96A98 100 aa7.25□□□□□ -1.25
LRRC28-216ENST00000559819 ANK3Q12955 4377 aaKnown RBP7.24□□□□□ -1.25
LRRC28-216ENST00000559819 BEAN1Q3B7T3 259 aa7.24□□□□□ -1.25
LRRC28-216ENST00000559819 STHQ8IWL8 128 aa7.24□□□□□ -1.25
LRRC28-216ENST00000559819 PRO1854Q9UHT4 67 aa7.24□□□□□ -1.25
LRRC28-216ENST00000559819 WNK1Q9H4A3 2382 aa7.24□□□□□ -1.25
LRRC28-216ENST00000559819 TRGV1A0A0A0MS02 117 aa7.24□□□□□ -1.25
LRRC28-216ENST00000559819 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
LRRC28-216ENST00000559819 CCL24O00175 119 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 TMEM263Q8WUH6 116 aaKnown RBP7.23□□□□□ -1.25
LRRC28-216ENST00000559819 CITED2Q99967 270 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-216ENST00000559819 GTSF1LQ9H1H1 148 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 SCGB1C2P0DMR2 95 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 NPC2P61916 151 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 PIK3CD-AS1Q5SR53 167 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 TMEM86BQ8N661 226 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 LITAFQ99732 161 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 WFDC10AQ9H1F0 79 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 SPANXA1Q9NS26 97 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 CCDC168Q8NDH2 2452 aa7.23□□□□□ -1.25
LRRC28-216ENST00000559819 IGHV1-58A0A0C4DH39 117 aa7.22□□□□□ -1.25
LRRC28-216ENST00000559819 IGHV3-33P01772 117 aa7.22□□□□□ -1.25
LRRC28-216ENST00000559819 FHL3Q13643 280 aa7.22□□□□□ -1.25
LRRC28-216ENST00000559819 ADAMTSL4-AS1Q5T5F5 129 aa7.22□□□□□ -1.25
LRRC28-216ENST00000559819 TINCRA0A1B0GVN0 87 aa7.22□□□□□ -1.25
LRRC28-216ENST00000559819 TMEM238C9JI98 176 aa7.22□□□□□ -1.25
LRRC28-216ENST00000559819 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
LRRC28-216ENST00000559819 GAGE12HA6NDE8 117 aa7.21□□□□□ -1.25
LRRC28-216ENST00000559819 Q6ZTI0 123 aa7.21□□□□□ -1.25
LRRC28-216ENST00000559819 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.21□□□□□ -1.25
LRRC28-216ENST00000559819 VSIG2Q96IQ7 327 aa7.21□□□□□ -1.25
LRRC28-216ENST00000559819 NDUFA12Q9UI09 145 aa7.21□□□□□ -1.25
LRRC28-216ENST00000559819 NF1P21359 2839 aa7.21□□□□□ -1.25
LRRC28-216ENST00000559819 FLNAP21333 2647 aaKnown RBP7.21□□□□□ -1.26
LRRC28-216ENST00000559819 NDUFA7O95182 113 aa7.21□□□□□ -1.26
LRRC28-216ENST00000559819 LINC00694P0DN24 101 aa7.21□□□□□ -1.26
LRRC28-216ENST00000559819 IL17DQ8TAD2 202 aa7.21□□□□□ -1.26
LRRC28-216ENST00000559819 C1QTNF4Q9BXJ3 329 aa7.21□□□□□ -1.26
LRRC28-216ENST00000559819 J3QR89 54 aa7.21□□□□□ -1.26
LRRC28-216ENST00000559819 PRSS2P07478 247 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms