RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 DPM2O94777 84 aa9□□□□□ -0.97
USP3-213ENST00000559711 MIFP14174 115 aa9□□□□□ -0.97
USP3-213ENST00000559711 MRPL35Q9NZE8 188 aaKnown RBP9□□□□□ -0.97
USP3-213ENST00000559711 HHLA3Q9XRX5 114 aa9□□□□□ -0.97
USP3-213ENST00000559711 CMYA5Q8N3K9 4069 aa9□□□□□ -0.97
USP3-213ENST00000559711 IGHV4-28A0A0C4DH34 117 aa8.99□□□□□ -0.97
USP3-213ENST00000559711 PRSS29PA6NIE9 313 aa8.99□□□□□ -0.97
USP3-213ENST00000559711 IGKCP01834 107 aa8.99□□□□□ -0.97
USP3-213ENST00000559711 COTL1Q14019 142 aa8.99□□□□□ -0.97
USP3-213ENST00000559711 C14orf144Q96I85 54 aa8.99□□□□□ -0.97
USP3-213ENST00000559711 CHCHD7Q9BUK0 85 aa8.99□□□□□ -0.97
USP3-213ENST00000559711 TRGV4A0A0C4DH28 118 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 F8VRH5 84 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 G3V4G9 280 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 DEFB130BP0DP73 79 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 DEFB130AP0DP74 79 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 PLNP26678 52 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 UBE2D3P61077 147 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 UBE2D2P62837 147 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 DEFA6Q01524 100 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 SAMD5Q5TGI4 173 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 DAZ4Q86SG3 579 aaKnown RBP8.98□□□□□ -0.97
USP3-213ENST00000559711 Q8NAQ8 132 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 PHLDA1Q8WV24 401 aaPredicted RBP8.98□□□□□ -0.97
USP3-213ENST00000559711 DAZ3Q9NR90 486 aaKnown RBP8.98□□□□□ -0.97
USP3-213ENST00000559711 PYGO1Q9Y3Y4 419 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 ANK2Q01484 3957 aa8.98□□□□□ -0.97
USP3-213ENST00000559711 IGHV3-38A0A0C4DH36 116 aa8.97□□□□□ -0.97
USP3-213ENST00000559711 PMVKQ15126 192 aa8.97□□□□□ -0.97
USP3-213ENST00000559711 FAM222AQ5U5X8 452 aa8.97□□□□□ -0.97
USP3-213ENST00000559711 STPG4Q8N801 248 aa8.97□□□□□ -0.97
USP3-213ENST00000559711 CHTOPQ9Y3Y2 248 aaKnown RBP8.97□□□□□ -0.97
USP3-213ENST00000559711 NPSP0C0P6 89 aa8.97□□□□□ -0.97
USP3-213ENST00000559711 ANKRD39Q53RE8 183 aa8.97□□□□□ -0.97
USP3-213ENST00000559711 CST9LQ9H4G1 147 aa8.97□□□□□ -0.97
USP3-213ENST00000559711 GAGE12JA6NER3 117 aa8.96□□□□□ -0.98
USP3-213ENST00000559711 GAGE1Q13065 139 aa8.96□□□□□ -0.98
USP3-213ENST00000559711 GAGE4Q13068 117 aa8.96□□□□□ -0.98
USP3-213ENST00000559711 GAGE5Q13069 117 aa8.96□□□□□ -0.98
USP3-213ENST00000559711 GAGE13Q4V321 117 aa8.96□□□□□ -0.98
USP3-213ENST00000559711 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.98
USP3-213ENST00000559711 IGLV4-3A0A075B6K6 122 aa8.95□□□□□ -0.98
USP3-213ENST00000559711 CRYBA4P53673 196 aa8.95□□□□□ -0.98
USP3-213ENST00000559711 DNAH3Q8TD57 4116 aa8.95□□□□□ -0.98
USP3-213ENST00000559711 DEFB4AO15263 64 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 LINC00694P0DN24 101 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 COX8AP10176 69 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 PAPPA-AS1Q5QFB9 102 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 SLC25A34Q6PIV7 304 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 NTM-AS1Q6ZSK4 140 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 FAM104AQ969W3 186 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 OPRPNQ99935 248 aaPredicted RBP8.94□□□□□ -0.98
USP3-213ENST00000559711 GTSF1LQ9H1H1 148 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 SPANXA1Q9NS26 97 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 LOC100131303A0A0U1RQF7 123 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 ZC2HC1BQ5TFG8 222 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
USP3-213ENST00000559711 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
USP3-213ENST00000559711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.93□□□□□ -0.98
USP3-213ENST00000559711 IGKV2-29A2NJV5 120 aaPredicted RBP8.93□□□□□ -0.98
USP3-213ENST00000559711 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
USP3-213ENST00000559711 AMELXQ99217 191 aa8.93□□□□□ -0.98
USP3-213ENST00000559711 TIMM21Q9BVV7 248 aa8.93□□□□□ -0.98
USP3-213ENST00000559711 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
USP3-213ENST00000559711 MRPS16Q9Y3D3 137 aaKnown RBP8.93□□□□□ -0.98
USP3-213ENST00000559711 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
USP3-213ENST00000559711 FGF6P10767 208 aa8.92□□□□□ -0.98
USP3-213ENST00000559711 HNRNPA3P51991 378 aaKnown RBP8.92□□□□□ -0.98
USP3-213ENST00000559711 DAD1P61803 113 aa8.92□□□□□ -0.98
USP3-213ENST00000559711 SBSPONQ8IVN8 264 aa8.92□□□□□ -0.98
USP3-213ENST00000559711 MDFIQ99750 246 aa8.92□□□□□ -0.98
USP3-213ENST00000559711 VCX2Q9H322 139 aa8.92□□□□□ -0.98
USP3-213ENST00000559711 CELA1Q9UNI1 258 aa8.92□□□□□ -0.98
USP3-213ENST00000559711 DLEU1O43261 78 aa8.91□□□□□ -0.98
USP3-213ENST00000559711 CTAG1AP78358 180 aa8.91□□□□□ -0.98
USP3-213ENST00000559711 BOD1L2Q8IYS8 172 aa8.91□□□□□ -0.98
USP3-213ENST00000559711 MRPS36P82909 103 aaKnown RBP8.91□□□□□ -0.98
USP3-213ENST00000559711 CEMP1Q6PRD7 247 aaPredicted RBP8.91□□□□□ -0.98
USP3-213ENST00000559711 NFE4Q86UQ8 179 aa8.91□□□□□ -0.98
USP3-213ENST00000559711 CSDC2Q9Y534 153 aaKnown RBP8.91□□□□□ -0.98
USP3-213ENST00000559711 IGKV2D-26A0A0A0MRZ7 120 aa8.9□□□□□ -0.98
USP3-213ENST00000559711 TEX48A0A1B0GUV7 120 aa8.9□□□□□ -0.98
USP3-213ENST00000559711 C11orf86A6NJI1 115 aa8.9□□□□□ -0.98
USP3-213ENST00000559711 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.98
USP3-213ENST00000559711 NOTCH1P46531 2555 aa8.89□□□□□ -0.99
USP3-213ENST00000559711 NBEAL1Q6ZS30 2694 aa8.89□□□□□ -0.99
USP3-213ENST00000559711 M0R143 59 aa8.89□□□□□ -0.99
USP3-213ENST00000559711 ATP5G1P05496 136 aa8.89□□□□□ -0.99
USP3-213ENST00000559711 GYPEP15421 78 aa8.89□□□□□ -0.99
USP3-213ENST00000559711 NMUP48645 174 aa8.89□□□□□ -0.99
USP3-213ENST00000559711 TMEM97Q5BJF2 176 aa8.89□□□□□ -0.99
USP3-213ENST00000559711 SNHG12Q9BXW3 62 aa8.89□□□□□ -0.99
USP3-213ENST00000559711 H7C423 109 aa8.88□□□□□ -0.99
USP3-213ENST00000559711 TCTAP57738 103 aa8.88□□□□□ -0.99
USP3-213ENST00000559711 SMAGPQ0VAQ4 97 aa8.88□□□□□ -0.99
USP3-213ENST00000559711 KPRPQ5T749 579 aaPredicted RBP8.88□□□□□ -0.99
USP3-213ENST00000559711 PCP2Q8IVA1 136 aa8.88□□□□□ -0.99
USP3-213ENST00000559711 TMEM243Q9BU79 118 aa8.88□□□□□ -0.99
USP3-213ENST00000559711 RETNQ9HD89 108 aa8.88□□□□□ -0.99
USP3-213ENST00000559711 TRBV25-1A0A075B6N4 114 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms