RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 TMEM243Q9BU79 118 aa12.34□□□□□ -0.43
KNSTRN-208ENST00000559604 RPP21Q9H633 154 aaKnown RBP12.34□□□□□ -0.43
KNSTRN-208ENST00000559604 IGLV4-60A0A075B6I1 120 aa12.33□□□□□ -0.44
KNSTRN-208ENST00000559604 IGLV10-54A0A075B6I4 117 aa12.33□□□□□ -0.44
KNSTRN-208ENST00000559604 A0A1B0GUV1 79 aa12.33□□□□□ -0.44
KNSTRN-208ENST00000559604 ATP6V1G1O75348 118 aa12.33□□□□□ -0.44
KNSTRN-208ENST00000559604 TWIST1Q15672 202 aa12.33□□□□□ -0.44
KNSTRN-208ENST00000559604 DGAT2L7PQ6IED9 249 aa12.33□□□□□ -0.44
KNSTRN-208ENST00000559604 GFRA4Q9GZZ7 299 aa12.33□□□□□ -0.44
KNSTRN-208ENST00000559604 J3QL48 77 aa12.32□□□□□ -0.44
KNSTRN-208ENST00000559604 C9orf163Q8N9P6 203 aa12.31□□□□□ -0.44
KNSTRN-208ENST00000559604 GATD1Q8NB37 220 aa12.31□□□□□ -0.44
KNSTRN-208ENST00000559604 GTSF1Q8WW33 167 aa12.31□□□□□ -0.44
KNSTRN-208ENST00000559604 TRAV26-2A0A0B4J265 109 aa12.3□□□□□ -0.44
KNSTRN-208ENST00000559604 KRTAP29-1A8MX34 341 aaPredicted RBP12.3□□□□□ -0.44
KNSTRN-208ENST00000559604 NDUFA5Q16718 116 aa12.3□□□□□ -0.44
KNSTRN-208ENST00000559604 TRAV8-4A0A0B4J246 113 aa12.29□□□□□ -0.44
KNSTRN-208ENST00000559604 AMTP48728 403 aa12.29□□□□□ -0.44
KNSTRN-208ENST00000559604 COTL1Q14019 142 aa12.29□□□□□ -0.44
KNSTRN-208ENST00000559604 ALKAL2Q6UX46 152 aa12.29□□□□□ -0.44
KNSTRN-208ENST00000559604 TMEM250H0YL14 139 aa12.28□□□□□ -0.44
KNSTRN-208ENST00000559604 FOXA3P55318 350 aaPredicted RBP12.28□□□□□ -0.44
KNSTRN-208ENST00000559604 CLRN3Q8NCR9 226 aa12.28□□□□□ -0.44
KNSTRN-208ENST00000559604 UBE2L6O14933 153 aa12.27□□□□□ -0.45
KNSTRN-208ENST00000559604 BLOC1S1P78537 153 aa12.27□□□□□ -0.45
KNSTRN-208ENST00000559604 LYPD6BQ8NI32 183 aa12.27□□□□□ -0.45
KNSTRN-208ENST00000559604 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.27□□□□□ -0.45
KNSTRN-208ENST00000559604 PANO1I0J062 215 aa12.26□□□□□ -0.45
KNSTRN-208ENST00000559604 SDIM1Q6ZPB5 146 aa12.26□□□□□ -0.45
KNSTRN-208ENST00000559604 RPL39LQ96EH5 51 aaKnown RBP12.26□□□□□ -0.45
KNSTRN-208ENST00000559604 hDV102S1A0JD36 115 aa12.25□□□□□ -0.45
KNSTRN-208ENST00000559604 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
KNSTRN-208ENST00000559604 CNBPP62633 177 aaKnown RBP12.25□□□□□ -0.45
KNSTRN-208ENST00000559604 FAM231DQ6ZW35 169 aa12.25□□□□□ -0.45
KNSTRN-208ENST00000559604 SLPIP03973 132 aa12.23□□□□□ -0.45
KNSTRN-208ENST00000559604 S100A1P23297 94 aa12.23□□□□□ -0.45
KNSTRN-208ENST00000559604 SMIM15Q7Z3B0 74 aa12.23□□□□□ -0.45
KNSTRN-208ENST00000559604 A8MWL6 223 aa12.22□□□□□ -0.45
KNSTRN-208ENST00000559604 CEBPGP53567 150 aa12.22□□□□□ -0.45
KNSTRN-208ENST00000559604 SDHAF1A6NFY7 115 aa12.21□□□□□ -0.45
KNSTRN-208ENST00000559604 NCR2O95944 276 aa12.21□□□□□ -0.45
KNSTRN-208ENST00000559604 RPL37AP61513 92 aaKnown RBP12.21□□□□□ -0.45
KNSTRN-208ENST00000559604 CT83Q5H943 113 aa12.21□□□□□ -0.45
KNSTRN-208ENST00000559604 TEX261Q6UWH6 196 aa12.21□□□□□ -0.45
KNSTRN-208ENST00000559604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.2□□□□□ -0.46
KNSTRN-208ENST00000559604 IGKV3OR2-268A0A0C4DH90 116 aa12.2□□□□□ -0.46
KNSTRN-208ENST00000559604 IGKV2-29A2NJV5 120 aaPredicted RBP12.2□□□□□ -0.46
KNSTRN-208ENST00000559604 GAGE12HA6NDE8 117 aa12.2□□□□□ -0.46
KNSTRN-208ENST00000559604 CIRBPQ14011 172 aaKnown RBP12.2□□□□□ -0.46
KNSTRN-208ENST00000559604 C15orf56Q8N910 161 aa12.2□□□□□ -0.46
KNSTRN-208ENST00000559604 AP5S1Q9NUS5 200 aa12.2□□□□□ -0.46
KNSTRN-208ENST00000559604 HMCN2Q8NDA2 5059 aa12.19□□□□□ -0.46
KNSTRN-208ENST00000559604 APCSP02743 223 aa12.19□□□□□ -0.46
KNSTRN-208ENST00000559604 HNRNPA3P51991 378 aaKnown RBP12.19□□□□□ -0.46
KNSTRN-208ENST00000559604 IGHV3-64A0A075B6Q5 118 aa12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 TRBV6-5A0A0K0K1A5 114 aa12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 H7C423 109 aa12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 GAS8-AS1O95177 125 aa12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 AMMECR1LQ6DCA0 310 aa12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 RNASEKQ6P5S7 137 aaKnown RBP12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 LINC01551Q86U37 167 aa12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 EIF5A2Q9GZV4 153 aaKnown RBP12.18□□□□□ -0.46
KNSTRN-208ENST00000559604 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.17□□□□□ -0.46
KNSTRN-208ENST00000559604 FAM231BA6NCW3 169 aa12.17□□□□□ -0.46
KNSTRN-208ENST00000559604 NDUFS6O75380 124 aaKnown RBP12.17□□□□□ -0.46
KNSTRN-208ENST00000559604 OXTP01178 125 aa12.17□□□□□ -0.46
KNSTRN-208ENST00000559604 FGF6P10767 208 aa12.17□□□□□ -0.46
KNSTRN-208ENST00000559604 I3L3M4 83 aa12.16□□□□□ -0.46
KNSTRN-208ENST00000559604 TSKUQ8WUA8 353 aa12.16□□□□□ -0.46
KNSTRN-208ENST00000559604 CHCHD10Q8WYQ3 142 aaPredicted RBP12.16□□□□□ -0.46
KNSTRN-208ENST00000559604 A0A1B0GUT8 65 aa12.15□□□□□ -0.46
KNSTRN-208ENST00000559604 HIGD1CA8MV81 97 aa12.15□□□□□ -0.46
KNSTRN-208ENST00000559604 SRP19P09132 144 aaKnown RBP12.15□□□□□ -0.46
KNSTRN-208ENST00000559604 CHTF8P0CG12 524 aa12.15□□□□□ -0.46
KNSTRN-208ENST00000559604 PMCHP20382 165 aa12.15□□□□□ -0.46
KNSTRN-208ENST00000559604 CFAP161Q6P656 301 aa12.15□□□□□ -0.46
KNSTRN-208ENST00000559604 BORCS7Q96B45 105 aa12.15□□□□□ -0.46
KNSTRN-208ENST00000559604 ZNF727A8MUV8 499 aa12.14□□□□□ -0.47
KNSTRN-208ENST00000559604 TSHBP01222 138 aa12.14□□□□□ -0.47
KNSTRN-208ENST00000559604 RNF185Q96GF1 192 aa12.14□□□□□ -0.47
KNSTRN-208ENST00000559604 TMEM191AQ9H0A3 160 aa12.14□□□□□ -0.47
KNSTRN-208ENST00000559604 OSTCQ9NRP0 149 aa12.14□□□□□ -0.47
KNSTRN-208ENST00000559604 ESDP10768 282 aa12.13□□□□□ -0.47
KNSTRN-208ENST00000559604 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
KNSTRN-208ENST00000559604 RPS10P46783 165 aaKnown RBP12.13□□□□□ -0.47
KNSTRN-208ENST00000559604 HIGD2BQ4VC39 106 aa12.13□□□□□ -0.47
KNSTRN-208ENST00000559604 SPACA4Q8TDM5 124 aa12.13□□□□□ -0.47
KNSTRN-208ENST00000559604 ST20Q9HBF5 79 aa12.13□□□□□ -0.47
KNSTRN-208ENST00000559604 A0A087WYN8 130 aa12.12□□□□□ -0.47
KNSTRN-208ENST00000559604 RAB4AP20338 218 aa12.12□□□□□ -0.47
KNSTRN-208ENST00000559604 FOXI1Q12951 378 aa12.12□□□□□ -0.47
KNSTRN-208ENST00000559604 OR5A1Q8NGJ0 315 aa12.12□□□□□ -0.47
KNSTRN-208ENST00000559604 TMEM242Q9NWH2 141 aa12.12□□□□□ -0.47
KNSTRN-208ENST00000559604 POLR2KP53803 58 aaKnown RBP12.11□□□□□ -0.47
KNSTRN-208ENST00000559604 DPH3Q96FX2 82 aa12.11□□□□□ -0.47
KNSTRN-208ENST00000559604 V9GYV3 84 aa12.11□□□□□ -0.47
KNSTRN-208ENST00000559604 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
KNSTRN-208ENST00000559604 COX6A2Q02221 97 aa12.1□□□□□ -0.47
KNSTRN-208ENST00000559604 AMN1Q8IY45 258 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms