RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 BCL2P10415 239 aa8.34□□□□□ -1.07
TPM1-220ENST00000559556 SSTP61278 116 aa8.34□□□□□ -1.07
TPM1-220ENST00000559556 CCL20P78556 96 aa8.34□□□□□ -1.07
TPM1-220ENST00000559556 UQCC3Q6UW78 93 aa8.34□□□□□ -1.07
TPM1-220ENST00000559556 EIF5A2Q9GZV4 153 aaKnown RBP8.34□□□□□ -1.07
TPM1-220ENST00000559556 IGHV3-64A0A075B6Q5 118 aa8.33□□□□□ -1.08
TPM1-220ENST00000559556 RPL35P42766 123 aaKnown RBP8.33□□□□□ -1.08
TPM1-220ENST00000559556 SUMO4Q6EEV6 95 aa8.33□□□□□ -1.08
TPM1-220ENST00000559556 IGLV4-60A0A075B6I1 120 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.32□□□□□ -1.08
TPM1-220ENST00000559556 PDE6DO43924 150 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 SLPIP03973 132 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 MGPP08493 103 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 GZMBP10144 247 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 MEF2BQ02080 365 aaPredicted RBP8.32□□□□□ -1.08
TPM1-220ENST00000559556 COMMD7Q86VX2 200 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 C11orf52Q96A22 123 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 PGLYRP4Q96LB8 373 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
TPM1-220ENST00000559556 A0A087WYN8 130 aa8.31□□□□□ -1.08
TPM1-220ENST00000559556 RASL11AQ6T310 242 aa8.31□□□□□ -1.08
TPM1-220ENST00000559556 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
TPM1-220ENST00000559556 AP5S1Q9NUS5 200 aa8.31□□□□□ -1.08
TPM1-220ENST00000559556 CHTF8P0CG12 524 aa8.3□□□□□ -1.08
TPM1-220ENST00000559556 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
TPM1-220ENST00000559556 CACNG7P62955 275 aa8.3□□□□□ -1.08
TPM1-220ENST00000559556 CENPWQ5EE01 88 aa8.3□□□□□ -1.08
TPM1-220ENST00000559556 TPPP3Q9BW30 176 aa8.3□□□□□ -1.08
TPM1-220ENST00000559556 C19orf71A6NCJ1 209 aa8.29□□□□□ -1.08
TPM1-220ENST00000559556 TMEM250H0YL14 139 aa8.29□□□□□ -1.08
TPM1-220ENST00000559556 C15orf56Q8N910 161 aa8.29□□□□□ -1.08
TPM1-220ENST00000559556 OR2D3Q8NGH3 330 aa8.29□□□□□ -1.08
TPM1-220ENST00000559556 SMIM12Q96EX1 92 aa8.29□□□□□ -1.08
TPM1-220ENST00000559556 NIT2Q9NQR4 276 aa8.29□□□□□ -1.08
TPM1-220ENST00000559556 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
TPM1-220ENST00000559556 TRGC1P0CF51 173 aa8.28□□□□□ -1.08
TPM1-220ENST00000559556 WDR73Q6P4I2 378 aa8.28□□□□□ -1.08
TPM1-220ENST00000559556 F2Z2F3 143 aa8.27□□□□□ -1.09
TPM1-220ENST00000559556 PHOX2AO14813 284 aa8.27□□□□□ -1.09
TPM1-220ENST00000559556 UBE2L6O14933 153 aa8.27□□□□□ -1.09
TPM1-220ENST00000559556 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
TPM1-220ENST00000559556 DPH3P1Q9H4G8 78 aa8.27□□□□□ -1.09
TPM1-220ENST00000559556 RNF213Q63HN8 5207 aa8.27□□□□□ -1.09
TPM1-220ENST00000559556 XKRY2A2RUG3 117 aa8.26□□□□□ -1.09
TPM1-220ENST00000559556 SRP19P09132 144 aaKnown RBP8.26□□□□□ -1.09
TPM1-220ENST00000559556 CTRLP40313 264 aa8.26□□□□□ -1.09
TPM1-220ENST00000559556 AMTP48728 403 aa8.26□□□□□ -1.09
TPM1-220ENST00000559556 COTL1Q14019 142 aa8.26□□□□□ -1.09
TPM1-220ENST00000559556 LYZL1Q6UWQ5 148 aa8.26□□□□□ -1.09
TPM1-220ENST00000559556 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
TPM1-220ENST00000559556 TMEM218A2RU14 115 aa8.25□□□□□ -1.09
TPM1-220ENST00000559556 NTF3P20783 257 aa8.25□□□□□ -1.09
TPM1-220ENST00000559556 GNG4P50150 75 aa8.25□□□□□ -1.09
TPM1-220ENST00000559556 C7orf33Q8WU49 177 aa8.25□□□□□ -1.09
TPM1-220ENST00000559556 DPH3Q96FX2 82 aa8.25□□□□□ -1.09
TPM1-220ENST00000559556 GAGE12HA6NDE8 117 aa8.24□□□□□ -1.09
TPM1-220ENST00000559556 RPS10P46783 165 aaKnown RBP8.24□□□□□ -1.09
TPM1-220ENST00000559556 SRSF3P84103 164 aaKnown RBP8.24□□□□□ -1.09
TPM1-220ENST00000559556 COX6A2Q02221 97 aa8.24□□□□□ -1.09
TPM1-220ENST00000559556 CFAP161Q6P656 301 aa8.24□□□□□ -1.09
TPM1-220ENST00000559556 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
TPM1-220ENST00000559556 CNFNQ9BYD5 112 aa8.24□□□□□ -1.09
TPM1-220ENST00000559556 CEBPGP53567 150 aa8.23□□□□□ -1.09
TPM1-220ENST00000559556 PRR3P79522 188 aaKnown RBP8.23□□□□□ -1.09
TPM1-220ENST00000559556 SEC11CQ9BY50 192 aa8.23□□□□□ -1.09
TPM1-220ENST00000559556 GVQW2A0A096LPI5 108 aaPredicted RBP8.22□□□□□ -1.09
TPM1-220ENST00000559556 ZNF727A8MUV8 499 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 C9JQL5 133 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 F8W036 122 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 GATD1Q8NB37 220 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 PRSS3P2Q8NHM4 247 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 LINC01600Q96MT4 127 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 SMIM7Q9BQ49 75 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 BIN3Q9NQY0 253 aa8.22□□□□□ -1.09
TPM1-220ENST00000559556 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
TPM1-220ENST00000559556 IGKV3OR2-268A0A0C4DH90 116 aa8.21□□□□□ -1.1
TPM1-220ENST00000559556 NCR2O95944 276 aa8.21□□□□□ -1.1
TPM1-220ENST00000559556 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
TPM1-220ENST00000559556 MAJINQ3KP22 176 aa8.21□□□□□ -1.1
TPM1-220ENST00000559556 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.1
TPM1-220ENST00000559556 TRAV26-2A0A0B4J265 109 aa8.2□□□□□ -1.1
TPM1-220ENST00000559556 H7C423 109 aa8.2□□□□□ -1.1
TPM1-220ENST00000559556 S100A1P23297 94 aa8.2□□□□□ -1.1
TPM1-220ENST00000559556 PNRC1Q12796 327 aaPredicted RBP8.2□□□□□ -1.1
TPM1-220ENST00000559556 AMMECR1LQ6DCA0 310 aa8.2□□□□□ -1.1
TPM1-220ENST00000559556 STPG4Q8N801 248 aa8.2□□□□□ -1.1
TPM1-220ENST00000559556 NUDT10Q8NFP7 164 aa8.2□□□□□ -1.1
TPM1-220ENST00000559556 NUDT11Q96G61 164 aa8.2□□□□□ -1.1
TPM1-220ENST00000559556 NAT8Q9UHE5 227 aa8.2□□□□□ -1.1
TPM1-220ENST00000559556 A0A096LNI7 61 aa8.19□□□□□ -1.1
TPM1-220ENST00000559556 APCSP02743 223 aa8.19□□□□□ -1.1
TPM1-220ENST00000559556 TWIST1Q15672 202 aa8.19□□□□□ -1.1
TPM1-220ENST00000559556 C10orf91Q5T1B1 145 aa8.19□□□□□ -1.1
TPM1-220ENST00000559556 GTSF1Q8WW33 167 aa8.19□□□□□ -1.1
TPM1-220ENST00000559556 RPL39LQ96EH5 51 aaKnown RBP8.19□□□□□ -1.1
TPM1-220ENST00000559556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.18□□□□□ -1.1
TPM1-220ENST00000559556 IGKV2-29A2NJV5 120 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms