RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
LRRC28-214ENST00000559433 TMEM70Q9BUB7 260 aa8.31□□□□□ -1.08
LRRC28-214ENST00000559433 C14orf177Q52M58 125 aa8.3□□□□□ -1.08
LRRC28-214ENST00000559433 CLPSL2Q6UWE3 100 aa8.3□□□□□ -1.08
LRRC28-214ENST00000559433 TEX261Q6UWH6 196 aa8.3□□□□□ -1.08
LRRC28-214ENST00000559433 GATD1Q8NB37 220 aa8.3□□□□□ -1.08
LRRC28-214ENST00000559433 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
LRRC28-214ENST00000559433 SMR3BP02814 79 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-214ENST00000559433 FOXA3P55318 350 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-214ENST00000559433 COTL1Q14019 142 aa8.29□□□□□ -1.08
LRRC28-214ENST00000559433 MIAQ16674 131 aa8.29□□□□□ -1.08
LRRC28-214ENST00000559433 LINC00269Q8N2A0 174 aa8.29□□□□□ -1.08
LRRC28-214ENST00000559433 DEFB104AQ8WTQ1 72 aa8.29□□□□□ -1.08
LRRC28-214ENST00000559433 TSKUQ8WUA8 353 aa8.29□□□□□ -1.08
LRRC28-214ENST00000559433 HIGD1CA8MV81 97 aa8.28□□□□□ -1.08
LRRC28-214ENST00000559433 UBE2L6O14933 153 aa8.28□□□□□ -1.08
LRRC28-214ENST00000559433 HLA-DQA1P01909 254 aa8.28□□□□□ -1.08
LRRC28-214ENST00000559433 AMTP48728 403 aa8.28□□□□□ -1.08
LRRC28-214ENST00000559433 HAMPP81172 84 aa8.28□□□□□ -1.08
LRRC28-214ENST00000559433 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
LRRC28-214ENST00000559433 GFRA4Q9GZZ7 299 aa8.28□□□□□ -1.08
LRRC28-214ENST00000559433 OSTCQ9NRP0 149 aa8.28□□□□□ -1.08
LRRC28-214ENST00000559433 A0A1B0GUT8 65 aa8.27□□□□□ -1.09
LRRC28-214ENST00000559433 INAFM2P0DMQ5 153 aa8.27□□□□□ -1.09
LRRC28-214ENST00000559433 PEA15Q15121 130 aa8.27□□□□□ -1.09
LRRC28-214ENST00000559433 TMEM241Q24JQ0 296 aa8.27□□□□□ -1.09
LRRC28-214ENST00000559433 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
LRRC28-214ENST00000559433 Q5VSD8 79 aa8.27□□□□□ -1.09
LRRC28-214ENST00000559433 PRR34Q9NV39 138 aa8.27□□□□□ -1.09
LRRC28-214ENST00000559433 FAM231BA6NCW3 169 aa8.26□□□□□ -1.09
LRRC28-214ENST00000559433 C9JQL5 133 aa8.26□□□□□ -1.09
LRRC28-214ENST00000559433 RPL23P62829 140 aaKnown RBP8.26□□□□□ -1.09
LRRC28-214ENST00000559433 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
LRRC28-214ENST00000559433 REG3AQ06141 175 aa8.26□□□□□ -1.09
LRRC28-214ENST00000559433 ADIRFQ15847 76 aa8.26□□□□□ -1.09
LRRC28-214ENST00000559433 ISOC2Q96AB3 205 aa8.26□□□□□ -1.09
LRRC28-214ENST00000559433 V9GYV3 84 aa8.26□□□□□ -1.09
LRRC28-214ENST00000559433 LINC01620Q4KN68 170 aa8.25□□□□□ -1.09
LRRC28-214ENST00000559433 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
LRRC28-214ENST00000559433 FAM30AQ9NZY2 134 aa8.25□□□□□ -1.09
LRRC28-214ENST00000559433 NAT8Q9UHE5 227 aa8.25□□□□□ -1.09
LRRC28-214ENST00000559433 DNAH8Q96JB1 4490 aa8.25□□□□□ -1.09
LRRC28-214ENST00000559433 IGLV4-60A0A075B6I1 120 aa8.24□□□□□ -1.09
LRRC28-214ENST00000559433 A0A1B0GUV1 79 aa8.24□□□□□ -1.09
LRRC28-214ENST00000559433 USP17L23D6RBM5 183 aa8.24□□□□□ -1.09
LRRC28-214ENST00000559433 TMEM191AQ9H0A3 160 aa8.24□□□□□ -1.09
LRRC28-214ENST00000559433 FAT1Q14517 4588 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 IGLV10-54A0A075B6I4 117 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 SDHAF1A6NFY7 115 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 NCR2O95944 276 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 APCSP02743 223 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 RIGQ13278 110 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 NUP35Q8NFH5 326 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 SMDT1Q9H4I9 107 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 NAT8BQ9UHF3 227 aa8.23□□□□□ -1.09
LRRC28-214ENST00000559433 SRRM2Q9UQ35 2752 aaKnown RBP8.23□□□□□ -1.09
LRRC28-214ENST00000559433 TRAV8-4A0A0B4J246 113 aa8.22□□□□□ -1.09
LRRC28-214ENST00000559433 TRBV6-5A0A0K0K1A5 114 aa8.22□□□□□ -1.09
LRRC28-214ENST00000559433 I3L3M4 83 aa8.22□□□□□ -1.09
LRRC28-214ENST00000559433 PMCHP20382 165 aa8.22□□□□□ -1.09
LRRC28-214ENST00000559433 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-214ENST00000559433 AMMECR1LQ6DCA0 310 aa8.22□□□□□ -1.09
LRRC28-214ENST00000559433 KRTAP26-1Q6PEX3 210 aa8.22□□□□□ -1.09
LRRC28-214ENST00000559433 Q6ZSA8 131 aa8.22□□□□□ -1.09
LRRC28-214ENST00000559433 ST20Q9HBF5 79 aa8.22□□□□□ -1.09
LRRC28-214ENST00000559433 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-214ENST00000559433 IGKV2-29A2NJV5 120 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-214ENST00000559433 GAS8-AS1O95177 125 aa8.21□□□□□ -1.1
LRRC28-214ENST00000559433 RAB4AP20338 218 aa8.21□□□□□ -1.1
LRRC28-214ENST00000559433 AMN1Q8IY45 258 aa8.21□□□□□ -1.1
LRRC28-214ENST00000559433 MRAP2Q96G30 205 aa8.21□□□□□ -1.1
LRRC28-214ENST00000559433 RNF185Q96GF1 192 aa8.21□□□□□ -1.1
LRRC28-214ENST00000559433 SMIM27A0A1W2PRY6 76 aa8.2□□□□□ -1.1
LRRC28-214ENST00000559433 H7C423 109 aa8.2□□□□□ -1.1
LRRC28-214ENST00000559433 PLA2G1BP04054 148 aaKnown RBP8.2□□□□□ -1.1
LRRC28-214ENST00000559433 PRSS1P07477 247 aa8.2□□□□□ -1.1
LRRC28-214ENST00000559433 RPS10P46783 165 aaKnown RBP8.2□□□□□ -1.1
LRRC28-214ENST00000559433 DGAT2L7PQ6IED9 249 aa8.2□□□□□ -1.1
LRRC28-214ENST00000559433 RNASEKQ6P5S7 137 aaKnown RBP8.2□□□□□ -1.1
LRRC28-214ENST00000559433 IGKV3OR2-268A0A0C4DH90 116 aa8.19□□□□□ -1.1
LRRC28-214ENST00000559433 SMKR1H3BMG3 65 aa8.19□□□□□ -1.1
LRRC28-214ENST00000559433 TSHBP01222 138 aa8.19□□□□□ -1.1
LRRC28-214ENST00000559433 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
LRRC28-214ENST00000559433 TMEM242Q9NWH2 141 aa8.19□□□□□ -1.1
LRRC28-214ENST00000559433 VPS13BQ7Z7G8 4022 aa8.19□□□□□ -1.1
LRRC28-214ENST00000559433 FGF6P10767 208 aa8.18□□□□□ -1.1
LRRC28-214ENST00000559433 ANKRD39Q53RE8 183 aa8.18□□□□□ -1.1
LRRC28-214ENST00000559433 CHAC1Q9BUX1 264 aa8.18□□□□□ -1.1
LRRC28-214ENST00000559433 AP5S1Q9NUS5 200 aa8.18□□□□□ -1.1
LRRC28-214ENST00000559433 hDV102S1A0JD36 115 aa8.17□□□□□ -1.1
LRRC28-214ENST00000559433 ZNF25P17030 456 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-214ENST00000559433 CAMPP49913 170 aa8.17□□□□□ -1.1
LRRC28-214ENST00000559433 RAB14P61106 215 aa8.17□□□□□ -1.1
LRRC28-214ENST00000559433 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
LRRC28-214ENST00000559433 SCXQ7RTU7 201 aa8.17□□□□□ -1.1
LRRC28-214ENST00000559433 DPH3Q96FX2 82 aa8.17□□□□□ -1.1
LRRC28-214ENST00000559433 TMEM101Q96IK0 257 aa8.17□□□□□ -1.1
LRRC28-214ENST00000559433 BTF3L4Q96K17 158 aa8.17□□□□□ -1.1
LRRC28-214ENST00000559433 TRBV27A0A0K0K1C4 114 aa8.16□□□□□ -1.1
LRRC28-214ENST00000559433 A0A1B0GW15 77 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms