RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 IGHV3-30-5P0DP03 117 aa14.69□□□□□ -0.06
SNX1-206ENST00000559389 AMTP48728 403 aa14.69□□□□□ -0.06
SNX1-206ENST00000559389 RPL32P62910 135 aaKnown RBP14.69□□□□□ -0.06
SNX1-206ENST00000559389 CHCHD5Q9BSY4 110 aa14.69□□□□□ -0.06
SNX1-206ENST00000559389 SMCO4Q9NRQ5 59 aa14.69□□□□□ -0.06
SNX1-206ENST00000559389 LAMTOR2Q9Y2Q5 125 aa14.69□□□□□ -0.06
SNX1-206ENST00000559389 TSHBP01222 138 aa14.68□□□□□ -0.06
SNX1-206ENST00000559389 PMCHP20382 165 aa14.68□□□□□ -0.06
SNX1-206ENST00000559389 C10orf126Q8N4M7 172 aa14.68□□□□□ -0.06
SNX1-206ENST00000559389 TMEM243Q9BU79 118 aa14.68□□□□□ -0.06
SNX1-206ENST00000559389 CHCHD7Q9BUK0 85 aa14.68□□□□□ -0.06
SNX1-206ENST00000559389 SMIM2Q9BVW6 85 aa14.68□□□□□ -0.06
SNX1-206ENST00000559389 DNAH6Q9C0G6 4158 aa14.67□□□□□ -0.06
SNX1-206ENST00000559389 TRAV9-2A0A087WT02 112 aa14.67□□□□□ -0.06
SNX1-206ENST00000559389 APCSP02743 223 aa14.67□□□□□ -0.06
SNX1-206ENST00000559389 PKIAP61925 76 aa14.67□□□□□ -0.06
SNX1-206ENST00000559389 VCYO14598 125 aa14.66□□□□□ -0.06
SNX1-206ENST00000559389 A0A087WX48 190 aa14.65□□□□□ -0.06
SNX1-206ENST00000559389 BTF3P20290 206 aaKnown RBP14.65□□□□□ -0.06
SNX1-206ENST00000559389 MPV17L2Q567V2 206 aa14.65□□□□□ -0.06
SNX1-206ENST00000559389 GAGE6Q13070 117 aa14.64□□□□□ -0.07
SNX1-206ENST00000559389 KIAA1644Q3SXP7 199 aa14.64□□□□□ -0.07
SNX1-206ENST00000559389 C6orf223Q8N319 242 aa14.64□□□□□ -0.07
SNX1-206ENST00000559389 KIR2DL4Q99706 377 aa14.64□□□□□ -0.07
SNX1-206ENST00000559389 MRPL18Q9H0U6 180 aaKnown RBP14.64□□□□□ -0.07
SNX1-206ENST00000559389 C1orf134Q5TEV5 83 aa14.63□□□□□ -0.07
SNX1-206ENST00000559389 RYR3Q15413 4870 aa14.63□□□□□ -0.07
SNX1-206ENST00000559389 KMT2AQ03164 3969 aa14.63□□□□□ -0.07
SNX1-206ENST00000559389 PRSS47A8MTI9 375 aa14.62□□□□□ -0.07
SNX1-206ENST00000559389 IBA57-AS1B1ANH7 110 aa14.62□□□□□ -0.07
SNX1-206ENST00000559389 TMEM262E9PQX1 116 aa14.62□□□□□ -0.07
SNX1-206ENST00000559389 ESDP10768 282 aa14.62□□□□□ -0.07
SNX1-206ENST00000559389 FCER1GP30273 86 aa14.62□□□□□ -0.07
SNX1-206ENST00000559389 LAGE3Q14657 143 aa14.62□□□□□ -0.07
SNX1-206ENST00000559389 MAP1LC3AQ9H492 121 aa14.62□□□□□ -0.07
SNX1-206ENST00000559389 RBX1P62877 108 aa14.61□□□□□ -0.07
SNX1-206ENST00000559389 Q8N976 141 aa14.61□□□□□ -0.07
SNX1-206ENST00000559389 UBE2L6O14933 153 aa14.6□□□□□ -0.07
SNX1-206ENST00000559389 RTL8CO15255 209 aa14.6□□□□□ -0.07
SNX1-206ENST00000559389 TRAPPC1Q9Y5R8 145 aa14.6□□□□□ -0.07
SNX1-206ENST00000559389 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.59□□□□□ -0.07
SNX1-206ENST00000559389 IGKV2-29A2NJV5 120 aaPredicted RBP14.59□□□□□ -0.07
SNX1-206ENST00000559389 H7C423 109 aa14.59□□□□□ -0.07
SNX1-206ENST00000559389 TCAPO15273 167 aa14.59□□□□□ -0.07
SNX1-206ENST00000559389 FABP9Q0Z7S8 132 aa14.59□□□□□ -0.07
SNX1-206ENST00000559389 ALKBH7Q9BT30 221 aaPredicted RBP14.59□□□□□ -0.07
SNX1-206ENST00000559389 KLK12Q9UKR0 248 aa14.59□□□□□ -0.07
SNX1-206ENST00000559389 LOC389332A0A1B0GUA5 103 aa14.57□□□□□ -0.08
SNX1-206ENST00000559389 A0A1B0GUV1 79 aa14.57□□□□□ -0.08
SNX1-206ENST00000559389 ANGP03950 147 aaKnown RBP14.57□□□□□ -0.08
SNX1-206ENST00000559389 Q6ZRN7 208 aaPredicted RBP14.57□□□□□ -0.08
SNX1-206ENST00000559389 FGF6P10767 208 aa14.56□□□□□ -0.08
SNX1-206ENST00000559389 NFE4Q86UQ8 179 aa14.56□□□□□ -0.08
SNX1-206ENST00000559389 Q8N8P6 123 aa14.56□□□□□ -0.08
SNX1-206ENST00000559389 C20orf203Q8NBC4 194 aa14.56□□□□□ -0.08
SNX1-206ENST00000559389 IGLV4-60A0A075B6I1 120 aa14.55□□□□□ -0.08
SNX1-206ENST00000559389 SCO1O75880 301 aa14.55□□□□□ -0.08
SNX1-206ENST00000559389 Q9HAA7 133 aa14.55□□□□□ -0.08
SNX1-206ENST00000559389 NXT2Q9NPJ8 142 aaKnown RBP14.55□□□□□ -0.08
SNX1-206ENST00000559389 TRAV8-3A0A0A6YYJ7 113 aa14.54□□□□□ -0.08
SNX1-206ENST00000559389 ATP6V1G1O75348 118 aa14.54□□□□□ -0.08
SNX1-206ENST00000559389 ZNF25P17030 456 aaPredicted RBP14.54□□□□□ -0.08
SNX1-206ENST00000559389 AMMECR1LQ6DCA0 310 aa14.54□□□□□ -0.08
SNX1-206ENST00000559389 UBE2WQ96B02 151 aa14.54□□□□□ -0.08
SNX1-206ENST00000559389 RAB5AP20339 215 aa14.53□□□□□ -0.08
SNX1-206ENST00000559389 LINC00336Q6ZUF6 198 aa14.53□□□□□ -0.08
SNX1-206ENST00000559389 MRPL52Q86TS9 123 aaKnown RBP14.53□□□□□ -0.08
SNX1-206ENST00000559389 PRR34Q9NV39 138 aa14.53□□□□□ -0.08
SNX1-206ENST00000559389 RNASEKQ6P5S7 137 aaKnown RBP14.52□□□□□ -0.09
SNX1-206ENST00000559389 ENHOQ6UWT2 76 aa14.52□□□□□ -0.09
SNX1-206ENST00000559389 COLCA2A8K830 154 aa14.51□□□□□ -0.09
SNX1-206ENST00000559389 K7EMI3 77 aa14.51□□□□□ -0.09
SNX1-206ENST00000559389 CRPP02741 224 aa14.51□□□□□ -0.09
SNX1-206ENST00000559389 S100A1P23297 94 aa14.51□□□□□ -0.09
SNX1-206ENST00000559389 IFI27P40305 119 aaPredicted RBP14.51□□□□□ -0.09
SNX1-206ENST00000559389 TMEM18Q96B42 140 aa14.51□□□□□ -0.09
SNX1-206ENST00000559389 Q0VG73 95 aa14.5□□□□□ -0.09
SNX1-206ENST00000559389 CLPSL2Q6UWE3 100 aa14.5□□□□□ -0.09
SNX1-206ENST00000559389 LINC00269Q8N2A0 174 aa14.5□□□□□ -0.09
SNX1-206ENST00000559389 UBE2D4Q9Y2X8 147 aa14.5□□□□□ -0.09
SNX1-206ENST00000559389 OR5A1Q8NGJ0 315 aa14.49□□□□□ -0.09
SNX1-206ENST00000559389 PRSS29PA6NIE9 313 aa14.48□□□□□ -0.09
SNX1-206ENST00000559389 RPL39P62891 51 aaKnown RBP14.48□□□□□ -0.09
SNX1-206ENST00000559389 REG3AQ06141 175 aa14.48□□□□□ -0.09
SNX1-206ENST00000559389 SMAGPQ0VAQ4 97 aa14.48□□□□□ -0.09
SNX1-206ENST00000559389 ORMDL2Q53FV1 153 aa14.48□□□□□ -0.09
SNX1-206ENST00000559389 C18orf32Q8TCD1 76 aa14.48□□□□□ -0.09
SNX1-206ENST00000559389 TMEM101Q96IK0 257 aa14.48□□□□□ -0.09
SNX1-206ENST00000559389 TIMM21Q9BVV7 248 aa14.48□□□□□ -0.09
SNX1-206ENST00000559389 CSDC2Q9Y534 153 aaKnown RBP14.48□□□□□ -0.09
SNX1-206ENST00000559389 TNP2Q05952 138 aa14.47□□□□□ -0.09
SNX1-206ENST00000559389 MIAQ16674 131 aa14.47□□□□□ -0.09
SNX1-206ENST00000559389 PRSS3P2Q8NHM4 247 aa14.47□□□□□ -0.09
SNX1-206ENST00000559389 RMI2Q96E14 147 aa14.47□□□□□ -0.09
SNX1-206ENST00000559389 LINC01546A6NGU7 62 aa14.46□□□□□ -0.09
SNX1-206ENST00000559389 TM2D2Q9BX73 214 aa14.46□□□□□ -0.09
SNX1-206ENST00000559389 TRGC2P03986 189 aa14.45□□□□□ -0.1
SNX1-206ENST00000559389 C1orf43Q9BWL3 253 aa14.45□□□□□ -0.1
SNX1-206ENST00000559389 SPANXA1Q9NS26 97 aa14.45□□□□□ -0.1
SNX1-206ENST00000559389 IGKV2D-24A0A075B6R9 120 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms