RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 K7EN84 100 aa13.13□□□□□ -0.31
TSPAN3-206ENST00000559373 UBE2L6O14933 153 aa13.13□□□□□ -0.31
TSPAN3-206ENST00000559373 SLPIP03973 132 aa13.13□□□□□ -0.31
TSPAN3-206ENST00000559373 CHTF8P0CG12 524 aa13.12□□□□□ -0.31
TSPAN3-206ENST00000559373 AMTP48728 403 aa13.12□□□□□ -0.31
TSPAN3-206ENST00000559373 FOXA3P55318 350 aaPredicted RBP13.12□□□□□ -0.31
TSPAN3-206ENST00000559373 C9orf62Q8N4C0 152 aa13.12□□□□□ -0.31
TSPAN3-206ENST00000559373 GATD1Q8NB37 220 aa13.12□□□□□ -0.31
TSPAN3-206ENST00000559373 OCC1Q8TAD7 63 aa13.12□□□□□ -0.31
TSPAN3-206ENST00000559373 SMIM12Q96EX1 92 aa13.12□□□□□ -0.31
TSPAN3-206ENST00000559373 A0A1B0GUV1 79 aa13.11□□□□□ -0.31
TSPAN3-206ENST00000559373 CTRLP40313 264 aa13.11□□□□□ -0.31
TSPAN3-206ENST00000559373 OXTP01178 125 aa13.1□□□□□ -0.31
TSPAN3-206ENST00000559373 COTL1Q14019 142 aa13.1□□□□□ -0.31
TSPAN3-206ENST00000559373 CLRN3Q8NCR9 226 aa13.1□□□□□ -0.31
TSPAN3-206ENST00000559373 RPL39LQ96EH5 51 aaKnown RBP13.1□□□□□ -0.31
TSPAN3-206ENST00000559373 DPH3Q96FX2 82 aa13.1□□□□□ -0.31
TSPAN3-206ENST00000559373 PGLYRP4Q96LB8 373 aa13.1□□□□□ -0.31
TSPAN3-206ENST00000559373 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
TSPAN3-206ENST00000559373 TRAV8-4A0A0B4J246 113 aa13.09□□□□□ -0.31
TSPAN3-206ENST00000559373 BIN3Q9NQY0 253 aa13.09□□□□□ -0.31
TSPAN3-206ENST00000559373 SLC51BQ86UW2 128 aa13.08□□□□□ -0.32
TSPAN3-206ENST00000559373 GAGE12HA6NDE8 117 aa13.07□□□□□ -0.32
TSPAN3-206ENST00000559373 Q6ZNX1 250 aa13.07□□□□□ -0.32
TSPAN3-206ENST00000559373 TCTE3Q8IZS6 198 aa13.07□□□□□ -0.32
TSPAN3-206ENST00000559373 GTSF1Q8WW33 167 aa13.07□□□□□ -0.32
TSPAN3-206ENST00000559373 AP5S1Q9NUS5 200 aa13.07□□□□□ -0.32
TSPAN3-206ENST00000559373 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.06□□□□□ -0.32
TSPAN3-206ENST00000559373 IGKV2-29A2NJV5 120 aaPredicted RBP13.06□□□□□ -0.32
TSPAN3-206ENST00000559373 CNBPP62633 177 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-206ENST00000559373 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
TSPAN3-206ENST00000559373 WDR73Q6P4I2 378 aa13.06□□□□□ -0.32
TSPAN3-206ENST00000559373 IGHV3-64A0A075B6Q5 118 aa13.05□□□□□ -0.32
TSPAN3-206ENST00000559373 C15orf56Q8N910 161 aa13.05□□□□□ -0.32
TSPAN3-206ENST00000559373 CEBPGP53567 150 aa13.04□□□□□ -0.32
TSPAN3-206ENST00000559373 SERTAD4-AS1Q5TG53 156 aa13.04□□□□□ -0.32
TSPAN3-206ENST00000559373 RNASEKQ6P5S7 137 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-206ENST00000559373 CNFNQ9BYD5 112 aa13.04□□□□□ -0.32
TSPAN3-206ENST00000559373 A0A087WYN8 130 aa13.03□□□□□ -0.32
TSPAN3-206ENST00000559373 AMMECR1LQ6DCA0 310 aa13.03□□□□□ -0.32
TSPAN3-206ENST00000559373 ALKAL2Q6UX46 152 aa13.03□□□□□ -0.32
TSPAN3-206ENST00000559373 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.02□□□□□ -0.33
TSPAN3-206ENST00000559373 GATCO43716 136 aaKnown RBP13.02□□□□□ -0.33
TSPAN3-206ENST00000559373 GAS8-AS1O95177 125 aa13.02□□□□□ -0.33
TSPAN3-206ENST00000559373 COX6A2Q02221 97 aa13.01□□□□□ -0.33
TSPAN3-206ENST00000559373 CIRBPQ14011 172 aaKnown RBP13.01□□□□□ -0.33
TSPAN3-206ENST00000559373 SDHAF1A6NFY7 115 aa13□□□□□ -0.33
TSPAN3-206ENST00000559373 SMIM15Q7Z3B0 74 aa13□□□□□ -0.33
TSPAN3-206ENST00000559373 CHCHD10Q8WYQ3 142 aaPredicted RBP13□□□□□ -0.33
TSPAN3-206ENST00000559373 hCG_2014768A0A024R1R8 64 aa12.99□□□□□ -0.33
TSPAN3-206ENST00000559373 APCSP02743 223 aa12.99□□□□□ -0.33
TSPAN3-206ENST00000559373 TAGLN2P37802 199 aaKnown RBP12.99□□□□□ -0.33
TSPAN3-206ENST00000559373 PRSS3P2Q8NHM4 247 aa12.99□□□□□ -0.33
TSPAN3-206ENST00000559373 SPACA4Q8TDM5 124 aa12.99□□□□□ -0.33
TSPAN3-206ENST00000559373 PLA2G2DQ9UNK4 145 aa12.99□□□□□ -0.33
TSPAN3-206ENST00000559373 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
TSPAN3-206ENST00000559373 FGF6P10767 208 aa12.98□□□□□ -0.33
TSPAN3-206ENST00000559373 LINC00526Q96FQ7 95 aa12.98□□□□□ -0.33
TSPAN3-206ENST00000559373 FAM231BA6NCW3 169 aa12.97□□□□□ -0.33
TSPAN3-206ENST00000559373 PMCHP20382 165 aa12.97□□□□□ -0.33
TSPAN3-206ENST00000559373 PHOX2AO14813 284 aa12.96□□□□□ -0.33
TSPAN3-206ENST00000559373 RPS10P46783 165 aaKnown RBP12.96□□□□□ -0.33
TSPAN3-206ENST00000559373 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
TSPAN3-206ENST00000559373 CFAP161Q6P656 301 aa12.96□□□□□ -0.33
TSPAN3-206ENST00000559373 A8MWL6 223 aa12.95□□□□□ -0.34
TSPAN3-206ENST00000559373 NCR2O95944 276 aa12.95□□□□□ -0.34
TSPAN3-206ENST00000559373 MT1HL1P0DM35 61 aa12.95□□□□□ -0.34
TSPAN3-206ENST00000559373 XCL1P47992 114 aa12.95□□□□□ -0.34
TSPAN3-206ENST00000559373 I3L3M4 83 aa12.94□□□□□ -0.34
TSPAN3-206ENST00000559373 FOXI1Q12951 378 aa12.94□□□□□ -0.34
TSPAN3-206ENST00000559373 LYPD6BQ8NI32 183 aa12.94□□□□□ -0.34
TSPAN3-206ENST00000559373 TMEM242Q9NWH2 141 aa12.94□□□□□ -0.34
TSPAN3-206ENST00000559373 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
TSPAN3-206ENST00000559373 BLOC1S1P78537 153 aa12.93□□□□□ -0.34
TSPAN3-206ENST00000559373 FAM231DQ6ZW35 169 aa12.93□□□□□ -0.34
TSPAN3-206ENST00000559373 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
TSPAN3-206ENST00000559373 RNF185Q96GF1 192 aa12.93□□□□□ -0.34
TSPAN3-206ENST00000559373 CCL25O15444 150 aa12.92□□□□□ -0.34
TSPAN3-206ENST00000559373 TSHBP01222 138 aa12.92□□□□□ -0.34
TSPAN3-206ENST00000559373 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
TSPAN3-206ENST00000559373 OR5A1Q8NGJ0 315 aa12.92□□□□□ -0.34
TSPAN3-206ENST00000559373 PLAC8Q9NZF1 115 aa12.92□□□□□ -0.34
TSPAN3-206ENST00000559373 HMCN2Q8NDA2 5059 aa12.92□□□□□ -0.34
TSPAN3-206ENST00000559373 A0A096LNI7 61 aa12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 SMKR1H3BMG3 65 aa12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 H7C423 109 aa12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 Q6ZRU5 148 aa12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 BTF3L4Q96K17 158 aa12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 SMIM7Q9BQ49 75 aa12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 EIF5A2Q9GZV4 153 aaKnown RBP12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 ST20Q9HBF5 79 aa12.91□□□□□ -0.34
TSPAN3-206ENST00000559373 GVQW2A0A096LPI5 108 aaPredicted RBP12.9□□□□□ -0.34
TSPAN3-206ENST00000559373 LINC00959A0A1B0GUT2 108 aa12.9□□□□□ -0.34
TSPAN3-206ENST00000559373 HIGD1CA8MV81 97 aa12.9□□□□□ -0.34
TSPAN3-206ENST00000559373 STPG4Q8N801 248 aa12.9□□□□□ -0.34
TSPAN3-206ENST00000559373 TMEM101Q96IK0 257 aa12.9□□□□□ -0.34
TSPAN3-206ENST00000559373 TRBV6-5A0A0K0K1A5 114 aa12.89□□□□□ -0.35
TSPAN3-206ENST00000559373 ESDP10768 282 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms