RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 PRR34Q9NV39 138 aa7.21□□□□□ -1.26
SPG11-216ENST00000559347 HIGD1CA8MV81 97 aa7.2□□□□□ -1.26
SPG11-216ENST00000559347 FOXA3P55318 350 aaPredicted RBP7.2□□□□□ -1.26
SPG11-216ENST00000559347 MIAQ16674 131 aa7.2□□□□□ -1.26
SPG11-216ENST00000559347 CLPSL2Q6UWE3 100 aa7.2□□□□□ -1.26
SPG11-216ENST00000559347 SMIM15Q7Z3B0 74 aa7.2□□□□□ -1.26
SPG11-216ENST00000559347 TSKUQ8WUA8 353 aa7.2□□□□□ -1.26
SPG11-216ENST00000559347 FRZBQ92765 325 aa7.2□□□□□ -1.26
SPG11-216ENST00000559347 GFRA4Q9GZZ7 299 aa7.2□□□□□ -1.26
SPG11-216ENST00000559347 OSTCQ9NRP0 149 aa7.2□□□□□ -1.26
SPG11-216ENST00000559347 FAM231BA6NCW3 169 aa7.19□□□□□ -1.26
SPG11-216ENST00000559347 C9JQL5 133 aa7.19□□□□□ -1.26
SPG11-216ENST00000559347 FAM74A3Q4VXF1 159 aa7.19□□□□□ -1.26
SPG11-216ENST00000559347 ISOC2Q96AB3 205 aa7.19□□□□□ -1.26
SPG11-216ENST00000559347 BORCS7Q96B45 105 aa7.19□□□□□ -1.26
SPG11-216ENST00000559347 RPL39LQ96EH5 51 aaKnown RBP7.19□□□□□ -1.26
SPG11-216ENST00000559347 TMEM243Q9BU79 118 aa7.19□□□□□ -1.26
SPG11-216ENST00000559347 V9GYV3 84 aa7.19□□□□□ -1.26
SPG11-216ENST00000559347 A0A1B0GUT8 65 aa7.18□□□□□ -1.26
SPG11-216ENST00000559347 HLA-DQA1P01909 254 aa7.18□□□□□ -1.26
SPG11-216ENST00000559347 RPL23P62829 140 aaKnown RBP7.18□□□□□ -1.26
SPG11-216ENST00000559347 HAMPP81172 84 aa7.18□□□□□ -1.26
SPG11-216ENST00000559347 SRSF3P84103 164 aaKnown RBP7.18□□□□□ -1.26
SPG11-216ENST00000559347 COTL1Q14019 142 aa7.18□□□□□ -1.26
SPG11-216ENST00000559347 LINC00269Q8N2A0 174 aa7.18□□□□□ -1.26
SPG11-216ENST00000559347 C20orf203Q8NBC4 194 aa7.18□□□□□ -1.26
SPG11-216ENST00000559347 DEFB104AQ8WTQ1 72 aa7.18□□□□□ -1.26
SPG11-216ENST00000559347 SRRM2Q9UQ35 2752 aaKnown RBP7.17□□□□□ -1.26
SPG11-216ENST00000559347 A0A1B0GUV1 79 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 AMTP48728 403 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 REG3AQ06141 175 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 ADIRFQ15847 76 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 TMEM241Q24JQ0 296 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 Q6ZSA8 131 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 TMEM191AQ9H0A3 160 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 FAM30AQ9NZY2 134 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 NAT8Q9UHE5 227 aa7.17□□□□□ -1.26
SPG11-216ENST00000559347 IGLV4-60A0A075B6I1 120 aa7.16□□□□□ -1.26
SPG11-216ENST00000559347 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
SPG11-216ENST00000559347 EPM2AB3EWF7 344 aa7.16□□□□□ -1.26
SPG11-216ENST00000559347 UBE2L6O14933 153 aa7.16□□□□□ -1.26
SPG11-216ENST00000559347 Q5VSD8 79 aa7.16□□□□□ -1.26
SPG11-216ENST00000559347 KRTAP26-1Q6PEX3 210 aa7.16□□□□□ -1.26
SPG11-216ENST00000559347 NUP35Q8NFH5 326 aa7.16□□□□□ -1.26
SPG11-216ENST00000559347 SMDT1Q9H4I9 107 aa7.16□□□□□ -1.26
SPG11-216ENST00000559347 TRBV6-5A0A0K0K1A5 114 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 USP17L23D6RBM5 183 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 GAS8-AS1O95177 125 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 NCR2O95944 276 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 APCSP02743 223 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 PEA15Q15121 130 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 LINC01620Q4KN68 170 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 C14orf177Q52M58 125 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 RNF185Q96GF1 192 aa7.15□□□□□ -1.26
SPG11-216ENST00000559347 IGLV10-54A0A075B6I4 117 aa7.14□□□□□ -1.27
SPG11-216ENST00000559347 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
SPG11-216ENST00000559347 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
SPG11-216ENST00000559347 AMN1Q8IY45 258 aa7.14□□□□□ -1.27
SPG11-216ENST00000559347 NAT8BQ9UHF3 227 aa7.14□□□□□ -1.27
SPG11-216ENST00000559347 MYCBP2O75592 4640 aa7.14□□□□□ -1.27
SPG11-216ENST00000559347 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.13□□□□□ -1.27
SPG11-216ENST00000559347 TRAV8-4A0A0B4J246 113 aa7.13□□□□□ -1.27
SPG11-216ENST00000559347 IGKV2-29A2NJV5 120 aaPredicted RBP7.13□□□□□ -1.27
SPG11-216ENST00000559347 RAB4AP20338 218 aa7.13□□□□□ -1.27
SPG11-216ENST00000559347 RPS10P46783 165 aaKnown RBP7.13□□□□□ -1.27
SPG11-216ENST00000559347 RIGQ13278 110 aa7.13□□□□□ -1.27
SPG11-216ENST00000559347 CFAP161Q6P656 301 aa7.13□□□□□ -1.27
SPG11-216ENST00000559347 MRAP2Q96G30 205 aa7.13□□□□□ -1.27
SPG11-216ENST00000559347 SMIM27A0A1W2PRY6 76 aa7.12□□□□□ -1.27
SPG11-216ENST00000559347 H7C423 109 aa7.12□□□□□ -1.27
SPG11-216ENST00000559347 I3L3M4 83 aa7.12□□□□□ -1.27
SPG11-216ENST00000559347 PRSS1P07477 247 aa7.12□□□□□ -1.27
SPG11-216ENST00000559347 ST20Q9HBF5 79 aa7.12□□□□□ -1.27
SPG11-216ENST00000559347 TMEM242Q9NWH2 141 aa7.12□□□□□ -1.27
SPG11-216ENST00000559347 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
SPG11-216ENST00000559347 SMKR1H3BMG3 65 aa7.11□□□□□ -1.27
SPG11-216ENST00000559347 TSHBP01222 138 aa7.11□□□□□ -1.27
SPG11-216ENST00000559347 FGF6P10767 208 aa7.11□□□□□ -1.27
SPG11-216ENST00000559347 POLR2KP53803 58 aaKnown RBP7.11□□□□□ -1.27
SPG11-216ENST00000559347 AMMECR1LQ6DCA0 310 aa7.11□□□□□ -1.27
SPG11-216ENST00000559347 SCXQ7RTU7 201 aa7.11□□□□□ -1.27
SPG11-216ENST00000559347 ESDP10768 282 aa7.1□□□□□ -1.27
SPG11-216ENST00000559347 ZNF25P17030 456 aaPredicted RBP7.1□□□□□ -1.27
SPG11-216ENST00000559347 PMCHP20382 165 aa7.1□□□□□ -1.27
SPG11-216ENST00000559347 NRACQ8N912 160 aa7.1□□□□□ -1.27
SPG11-216ENST00000559347 IGKV3OR2-268A0A0C4DH90 116 aa7.09□□□□□ -1.27
SPG11-216ENST00000559347 A0A1B0GW15 77 aa7.09□□□□□ -1.27
SPG11-216ENST00000559347 MRPL51Q4U2R6 128 aaKnown RBP7.09□□□□□ -1.27
SPG11-216ENST00000559347 FAM104BQ5XKR9 115 aa7.09□□□□□ -1.27
SPG11-216ENST00000559347 RNASEKQ6P5S7 137 aaKnown RBP7.09□□□□□ -1.27
SPG11-216ENST00000559347 PKHD1L1Q86WI1 4243 aa7.09□□□□□ -1.27
SPG11-216ENST00000559347 A0A1B0GXF2 115 aa7.08□□□□□ -1.28
SPG11-216ENST00000559347 C7orf77A4D0Y5 90 aa7.08□□□□□ -1.28
SPG11-216ENST00000559347 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
SPG11-216ENST00000559347 CAMPP49913 170 aa7.08□□□□□ -1.28
SPG11-216ENST00000559347 SUMO2P61956 95 aaKnown RBP7.08□□□□□ -1.28
SPG11-216ENST00000559347 DGAT2L7PQ6IED9 249 aa7.08□□□□□ -1.28
SPG11-216ENST00000559347 MRPL54Q6P161 138 aaKnown RBP7.08□□□□□ -1.28
SPG11-216ENST00000559347 C9orf163Q8N9P6 203 aa7.08□□□□□ -1.28
SPG11-216ENST00000559347 CLRN3Q8NCR9 226 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms