RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RNASE8Q8TDE3 154 aaKnown RBP8.17□□□□□ -1.1
CLPX-204ENST00000559152 F8P00451 2351 aa8.17□□□□□ -1.1
CLPX-204ENST00000559152 NSD1Q96L73 2696 aaPredicted RBP8.17□□□□□ -1.1
CLPX-204ENST00000559152 SORL1Q92673 2214 aa8.17□□□□□ -1.1
CLPX-204ENST00000559152 ZNF815PA8K554 130 aa8.17□□□□□ -1.1
CLPX-204ENST00000559152 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
CLPX-204ENST00000559152 SPANXA1Q9NS26 97 aa8.17□□□□□ -1.1
CLPX-204ENST00000559152 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
CLPX-204ENST00000559152 FXYD2P54710 66 aa8.16□□□□□ -1.1
CLPX-204ENST00000559152 NIPBLQ6KC79 2804 aaeCLIP8.16□□□□□ -1.1
CLPX-204ENST00000559152 TRGV1A0A0A0MS02 117 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 CIDEAO60543 219 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 DAZ2Q13117 558 aaKnown RBP8.15□□□□□ -1.1
CLPX-204ENST00000559152 COTL1Q14019 142 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 SCGB1D4Q6XE38 83 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 Q6ZSN1 163 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 C16orf74Q96GX8 76 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 HIVEP2P31629 2446 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 TRBV10-1A0A0K0K1A3 114 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 GAGE10A6NGK3 116 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 PF4P02776 101 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 ZNRF2Q8NHG8 242 aa8.15□□□□□ -1.1
CLPX-204ENST00000559152 ANK3Q12955 4377 aaKnown RBP8.14□□□□□ -1.11
CLPX-204ENST00000559152 TRAV4A0A0B4J268 109 aa8.14□□□□□ -1.11
CLPX-204ENST00000559152 H3BUT2 72 aa8.14□□□□□ -1.11
CLPX-204ENST00000559152 EMP1P54849 157 aa8.14□□□□□ -1.11
CLPX-204ENST00000559152 AMELXQ99217 191 aa8.14□□□□□ -1.11
CLPX-204ENST00000559152 C19orf73Q9NVV2 129 aa8.14□□□□□ -1.11
CLPX-204ENST00000559152 TRBV7-3A0A075B6L6 115 aa8.14□□□□□ -1.11
CLPX-204ENST00000559152 RAB37Q96AX2 223 aa8.14□□□□□ -1.11
CLPX-204ENST00000559152 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
CLPX-204ENST00000559152 A6NJY4 79 aa8.13□□□□□ -1.11
CLPX-204ENST00000559152 LGALS3P17931 250 aaKnown RBP8.13□□□□□ -1.11
CLPX-204ENST00000559152 OPRPNQ99935 248 aaPredicted RBP8.13□□□□□ -1.11
CLPX-204ENST00000559152 CHCHD7Q9BUK0 85 aa8.13□□□□□ -1.11
CLPX-204ENST00000559152 NHP2Q9NX24 153 aaKnown RBP8.13□□□□□ -1.11
CLPX-204ENST00000559152 A0A1W2PPM0 123 aa8.13□□□□□ -1.11
CLPX-204ENST00000559152 TMEM223A0PJW6 202 aa8.13□□□□□ -1.11
CLPX-204ENST00000559152 LEPROTO15243 131 aa8.13□□□□□ -1.11
CLPX-204ENST00000559152 FABP2P12104 132 aa8.13□□□□□ -1.11
CLPX-204ENST00000559152 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
CLPX-204ENST00000559152 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
CLPX-204ENST00000559152 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
CLPX-204ENST00000559152 SETD2Q9BYW2 2564 aaPredicted RBP8.12□□□□□ -1.11
CLPX-204ENST00000559152 J3QQQ9 107 aa8.12□□□□□ -1.11
CLPX-204ENST00000559152 GIG44P09565 113 aaPredicted RBP8.12□□□□□ -1.11
CLPX-204ENST00000559152 INSL3P51460 131 aa8.12□□□□□ -1.11
CLPX-204ENST00000559152 SMAGPQ0VAQ4 97 aa8.12□□□□□ -1.11
CLPX-204ENST00000559152 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLPX-204ENST00000559152 RRN3P1Q2M238 152 aa8.12□□□□□ -1.11
CLPX-204ENST00000559152 SAMD5Q5TGI4 173 aa8.12□□□□□ -1.11
CLPX-204ENST00000559152 DAZ4Q86SG3 579 aaKnown RBP8.12□□□□□ -1.11
CLPX-204ENST00000559152 LINC00482Q8N8I6 264 aa8.12□□□□□ -1.11
CLPX-204ENST00000559152 DAZ3Q9NR90 486 aaKnown RBP8.12□□□□□ -1.11
CLPX-204ENST00000559152 UBE2D4Q9Y2X8 147 aa8.12□□□□□ -1.11
CLPX-204ENST00000559152 K7EP34 96 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 RPL35AP18077 110 aaKnown RBP8.11□□□□□ -1.11
CLPX-204ENST00000559152 MRPS36P82909 103 aaKnown RBP8.11□□□□□ -1.11
CLPX-204ENST00000559152 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 K7EP13 123 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 K7EQD1 137 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 FOSL1P15407 271 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 ZNF22P17026 224 aaPredicted RBP8.11□□□□□ -1.11
CLPX-204ENST00000559152 C12orf74Q32Q52 190 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 Q6ZTI0 123 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 OR5A1Q8NGJ0 315 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 PHLDA1Q8WV24 401 aaPredicted RBP8.11□□□□□ -1.11
CLPX-204ENST00000559152 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
CLPX-204ENST00000559152 SPANXB1Q9NS25 103 aaPredicted RBP8.11□□□□□ -1.11
CLPX-204ENST00000559152 A0A0J9YXV3 536 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 A0A1B0GWB2 263 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 CSNK1G2-AS1Q8NCQ2 148 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 ZNF479Q96JC4 524 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 NOP10Q9NPE3 64 aaKnown RBP8.1□□□□□ -1.11
CLPX-204ENST00000559152 A0A0J9YY99 117 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 TINCRA0A1B0GVN0 87 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 KRTAP10-3P60369 221 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 DGAT2L7PQ6IED9 249 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 Q9UF83 564 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 SPCS1Q9Y6A9 102 aa8.1□□□□□ -1.11
CLPX-204ENST00000559152 IGHV3-38A0A0C4DH36 116 aa8.09□□□□□ -1.11
CLPX-204ENST00000559152 SLC25A29Q8N8R3 303 aa8.09□□□□□ -1.11
CLPX-204ENST00000559152 WFDC10AQ9H1F0 79 aa8.09□□□□□ -1.11
CLPX-204ENST00000559152 FN1P02751 2386 aaKnown RBP8.09□□□□□ -1.11
CLPX-204ENST00000559152 TRGV2A0A075B6R0 118 aa8.09□□□□□ -1.12
CLPX-204ENST00000559152 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.09□□□□□ -1.12
CLPX-204ENST00000559152 GAGE12BA1L429 117 aa8.09□□□□□ -1.12
CLPX-204ENST00000559152 IGKV2-29A2NJV5 120 aaPredicted RBP8.09□□□□□ -1.12
CLPX-204ENST00000559152 INAFM1C9JVW0 142 aa8.09□□□□□ -1.12
CLPX-204ENST00000559152 FAM104AQ969W3 186 aa8.09□□□□□ -1.12
CLPX-204ENST00000559152 TRBV6-4A0A1B0GX49 114 aa8.08□□□□□ -1.12
CLPX-204ENST00000559152 K7ERJ3 54 aa8.08□□□□□ -1.12
CLPX-204ENST00000559152 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
CLPX-204ENST00000559152 CSDC2Q9Y534 153 aaKnown RBP8.08□□□□□ -1.12
CLPX-204ENST00000559152 PLAC8L1A1L4L8 177 aa8.07□□□□□ -1.12
CLPX-204ENST00000559152 IGLL5B9A064 214 aa8.07□□□□□ -1.12
CLPX-204ENST00000559152 TSPEAR-AS2P59090 65 aa8.07□□□□□ -1.12
CLPX-204ENST00000559152 UBE2D3P61077 147 aa8.07□□□□□ -1.12
CLPX-204ENST00000559152 UBE2D2P62837 147 aa8.07□□□□□ -1.12
CLPX-204ENST00000559152 CEMP1Q6PRD7 247 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms