RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 SMCO4Q9NRQ5 59 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 IGLV2-18A0A075B6J9 118 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 TRBV10-1A0A0K0K1A3 114 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 GAGE12JA6NER3 117 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 IGLL5B9A064 214 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 NPYP01303 97 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 MGPP08493 103 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 POLR2KP53803 58 aaKnown RBP4.96□□□□□ -1.62
TRAF3-206ENST00000558880 GAGE1Q13065 139 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 GAGE4Q13068 117 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 GAGE5Q13069 117 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 RHOHQ15669 191 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 ZNF56Q15929 161 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 ESRGQ1W209 222 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 KCNIP4Q6PIL6 250 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 FAM210BQ96KR6 192 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 KIAA1109Q2LD37 5005 aa4.96□□□□□ -1.62
TRAF3-206ENST00000558880 NUPR2A6NF83 97 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 PRSS47A8MTI9 375 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 D6R8Y8 96 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 KIAA1644Q3SXP7 199 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 LYPD5Q6UWN5 251 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 NEGR1Q7Z3B1 354 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 ZNRF2Q8NHG8 242 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 FRZBQ92765 325 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 URB1-AS1Q96HZ7 61 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 NIT2Q9NQR4 276 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 LINC00588Q9Y4M8 146 aa4.95□□□□□ -1.62
TRAF3-206ENST00000558880 TRBV7-3A0A075B6L6 115 aa4.94□□□□□ -1.62
TRAF3-206ENST00000558880 IGHV3-38A0A0C4DH36 116 aa4.94□□□□□ -1.62
TRAF3-206ENST00000558880 S100PP25815 95 aa4.94□□□□□ -1.62
TRAF3-206ENST00000558880 DEFB104AQ8WTQ1 72 aa4.94□□□□□ -1.62
TRAF3-206ENST00000558880 BORCS7Q96B45 105 aa4.94□□□□□ -1.62
TRAF3-206ENST00000558880 MRAP2Q96G30 205 aa4.94□□□□□ -1.62
TRAF3-206ENST00000558880 ALKBH7Q9BT30 221 aaPredicted RBP4.94□□□□□ -1.62
TRAF3-206ENST00000558880 TMEM70Q9BUB7 260 aa4.94□□□□□ -1.62
TRAF3-206ENST00000558880 DNAH5Q8TE73 4624 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 TRBV27A0A0K0K1C4 114 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 TNFRSF6BO95407 300 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 HLA-DQA1P01909 254 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 SMIM17P0DL12 118 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 RAB5AP20339 215 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 TIRAPP58753 221 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 FABP9Q0Z7S8 132 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 MRPL23Q16540 153 aaKnown RBP4.93□□□□□ -1.62
TRAF3-206ENST00000558880 C15orf53Q8NAA6 179 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 FAM104AQ969W3 186 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 DNAJC30Q96LL9 226 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 PRADC1Q9BSG0 188 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
TRAF3-206ENST00000558880 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
TRAF3-206ENST00000558880 SDHAF1A6NFY7 115 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 TSHBP01222 138 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 APCSP02743 223 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 MT-ND6P03923 174 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 TRGC2P03986 189 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 S100A8P05109 93 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 ESDP10768 282 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 CKS2P33552 79 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 TCTAP57738 103 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 RPL32P62910 135 aaKnown RBP4.92□□□□□ -1.62
TRAF3-206ENST00000558880 ATP6V0E2Q8NHE4 81 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 UPK3BQ9BT76 320 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 CHCHD7Q9BUK0 85 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 KRTAP1-5Q9BYS1 174 aa4.92□□□□□ -1.62
TRAF3-206ENST00000558880 KLK5Q9Y337 293 aaPredicted RBP4.92□□□□□ -1.62
TRAF3-206ENST00000558880 LINC01546A6NGU7 62 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 PPBPP02775 128 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 SRIP30626 198 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
TRAF3-206ENST00000558880 RPL36AP83881 106 aaKnown RBP4.91□□□□□ -1.62
TRAF3-206ENST00000558880 IQCJQ1A5X6 159 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 COX19Q49B96 90 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 OR10J3Q5JRS4 329 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 SMIM15Q7Z3B0 74 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 WFDC10BQ8IUB3 73 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 ORMDL3Q8N138 153 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 C18orf32Q8TCD1 76 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 RPL36ALQ969Q0 106 aaKnown RBP4.91□□□□□ -1.62
TRAF3-206ENST00000558880 PRELID3AQ96N28 172 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 C20orf78Q9BR46 151 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 GTSF1LQ9H1H1 148 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 MRPS16Q9Y3D3 137 aaKnown RBP4.91□□□□□ -1.62
TRAF3-206ENST00000558880 TRAPPC1Q9Y5R8 145 aa4.91□□□□□ -1.62
TRAF3-206ENST00000558880 A0A096LNJ9 63 aa4.9□□□□□ -1.63
TRAF3-206ENST00000558880 TRBV6-8A0A0A6YYG3 113 aa4.9□□□□□ -1.63
TRAF3-206ENST00000558880 H7C1H1 209 aa4.9□□□□□ -1.63
TRAF3-206ENST00000558880 LELP1Q5T871 98 aa4.9□□□□□ -1.63
TRAF3-206ENST00000558880 LGALS9CQ6DKI2 356 aa4.9□□□□□ -1.63
TRAF3-206ENST00000558880 DAZ4Q86SG3 579 aaKnown RBP4.9□□□□□ -1.63
TRAF3-206ENST00000558880 SMIM2Q9BVW6 85 aa4.9□□□□□ -1.63
TRAF3-206ENST00000558880 ST20Q9HBF5 79 aa4.9□□□□□ -1.63
TRAF3-206ENST00000558880 DAZ3Q9NR90 486 aaKnown RBP4.9□□□□□ -1.63
TRAF3-206ENST00000558880 NUPR1O60356 82 aa4.89□□□□□ -1.63
TRAF3-206ENST00000558880 IFI27P40305 119 aaPredicted RBP4.89□□□□□ -1.63
TRAF3-206ENST00000558880 LAMTOR2Q9Y2Q5 125 aa4.89□□□□□ -1.63
TRAF3-206ENST00000558880 TNFRSF18Q9Y5U5 241 aa4.89□□□□□ -1.63
TRAF3-206ENST00000558880 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 LOC389332A0A1B0GUA5 103 aa4.88□□□□□ -1.63
TRAF3-206ENST00000558880 I3L3M4 83 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms