RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 IGLV4-60A0A075B6I1 120 aa11.04□□□□□ -0.64
LRRC28-210ENST00000558879 CHAC1Q9BUX1 264 aa11.04□□□□□ -0.64
LRRC28-210ENST00000558879 GFRA4Q9GZZ7 299 aa11.04□□□□□ -0.64
LRRC28-210ENST00000558879 TRAV26-2A0A0B4J265 109 aa11.03□□□□□ -0.64
LRRC28-210ENST00000558879 GATCO43716 136 aaKnown RBP11.03□□□□□ -0.64
LRRC28-210ENST00000558879 COTL1Q14019 142 aa11.03□□□□□ -0.64
LRRC28-210ENST00000558879 PRSS1P07477 247 aa11.02□□□□□ -0.65
LRRC28-210ENST00000558879 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.65
LRRC28-210ENST00000558879 FAM210AQ96ND0 272 aa11.02□□□□□ -0.65
LRRC28-210ENST00000558879 TRAV8-4A0A0B4J246 113 aa11.01□□□□□ -0.65
LRRC28-210ENST00000558879 A8MWL6 223 aa11.01□□□□□ -0.65
LRRC28-210ENST00000558879 PLA2G1BP04054 148 aaKnown RBP11.01□□□□□ -0.65
LRRC28-210ENST00000558879 AMTP48728 403 aa11.01□□□□□ -0.65
LRRC28-210ENST00000558879 LINC01551Q86U37 167 aa11.01□□□□□ -0.65
LRRC28-210ENST00000558879 CIRBP-AS1Q8TBR5 109 aa11.01□□□□□ -0.65
LRRC28-210ENST00000558879 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
LRRC28-210ENST00000558879 HERC1Q15751 4861 aa11.01□□□□□ -0.65
LRRC28-210ENST00000558879 KRTAP10-4P60372 401 aaPredicted RBP11□□□□□ -0.65
LRRC28-210ENST00000558879 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
LRRC28-210ENST00000558879 DEFB104AQ8WTQ1 72 aa11□□□□□ -0.65
LRRC28-210ENST00000558879 SMIM7Q9BQ49 75 aa11□□□□□ -0.65
LRRC28-210ENST00000558879 IGLV10-54A0A075B6I4 117 aa10.99□□□□□ -0.65
LRRC28-210ENST00000558879 A0A1B0GVG6 124 aa10.99□□□□□ -0.65
LRRC28-210ENST00000558879 UBE2L6O14933 153 aa10.99□□□□□ -0.65
LRRC28-210ENST00000558879 SRP19P09132 144 aaKnown RBP10.99□□□□□ -0.65
LRRC28-210ENST00000558879 CEBPGP53567 150 aa10.99□□□□□ -0.65
LRRC28-210ENST00000558879 SMIM15Q7Z3B0 74 aa10.99□□□□□ -0.65
LRRC28-210ENST00000558879 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
LRRC28-210ENST00000558879 EIF5A2Q9GZV4 153 aaKnown RBP10.99□□□□□ -0.65
LRRC28-210ENST00000558879 NCR2O95944 276 aa10.98□□□□□ -0.65
LRRC28-210ENST00000558879 TEX261Q6UWH6 196 aa10.98□□□□□ -0.65
LRRC28-210ENST00000558879 TRBV6-5A0A0K0K1A5 114 aa10.97□□□□□ -0.65
LRRC28-210ENST00000558879 CLRN3Q8NCR9 226 aa10.97□□□□□ -0.65
LRRC28-210ENST00000558879 TSKUQ8WUA8 353 aa10.97□□□□□ -0.65
LRRC28-210ENST00000558879 OSTCQ9NRP0 149 aa10.97□□□□□ -0.65
LRRC28-210ENST00000558879 FAM231BA6NCW3 169 aa10.96□□□□□ -0.65
LRRC28-210ENST00000558879 SDHAF1A6NFY7 115 aa10.96□□□□□ -0.65
LRRC28-210ENST00000558879 ZNF727A8MUV8 499 aa10.96□□□□□ -0.65
LRRC28-210ENST00000558879 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
LRRC28-210ENST00000558879 CNBPP62633 177 aaKnown RBP10.96□□□□□ -0.65
LRRC28-210ENST00000558879 H7C423 109 aa10.95□□□□□ -0.66
LRRC28-210ENST00000558879 APCSP02743 223 aa10.95□□□□□ -0.66
LRRC28-210ENST00000558879 TMEM191AQ9H0A3 160 aa10.95□□□□□ -0.66
LRRC28-210ENST00000558879 A0A1B0GUT8 65 aa10.94□□□□□ -0.66
LRRC28-210ENST00000558879 GAS8-AS1O95177 125 aa10.94□□□□□ -0.66
LRRC28-210ENST00000558879 BORCS7Q96B45 105 aa10.94□□□□□ -0.66
LRRC28-210ENST00000558879 RNF185Q96GF1 192 aa10.94□□□□□ -0.66
LRRC28-210ENST00000558879 V9GYV3 84 aa10.94□□□□□ -0.66
LRRC28-210ENST00000558879 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.93□□□□□ -0.66
LRRC28-210ENST00000558879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.92□□□□□ -0.66
LRRC28-210ENST00000558879 hDV102S1A0JD36 115 aa10.92□□□□□ -0.66
LRRC28-210ENST00000558879 IGKV2-29A2NJV5 120 aaPredicted RBP10.92□□□□□ -0.66
LRRC28-210ENST00000558879 PANO1I0J062 215 aa10.92□□□□□ -0.66
LRRC28-210ENST00000558879 I3L3M4 83 aa10.92□□□□□ -0.66
LRRC28-210ENST00000558879 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
LRRC28-210ENST00000558879 SDIM1Q6ZPB5 146 aa10.92□□□□□ -0.66
LRRC28-210ENST00000558879 C15orf56Q8N910 161 aa10.92□□□□□ -0.66
LRRC28-210ENST00000558879 ISOC2Q96AB3 205 aa10.92□□□□□ -0.66
LRRC28-210ENST00000558879 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
LRRC28-210ENST00000558879 SLPIP03973 132 aa10.91□□□□□ -0.66
LRRC28-210ENST00000558879 FGF6P10767 208 aa10.91□□□□□ -0.66
LRRC28-210ENST00000558879 ESDP10768 282 aa10.91□□□□□ -0.66
LRRC28-210ENST00000558879 ZNF25P17030 456 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-210ENST00000558879 RPS10P46783 165 aaKnown RBP10.91□□□□□ -0.66
LRRC28-210ENST00000558879 KRTAP29-1A8MX34 341 aaPredicted RBP10.9□□□□□ -0.66
LRRC28-210ENST00000558879 TSHBP01222 138 aa10.9□□□□□ -0.66
LRRC28-210ENST00000558879 RAB4AP20338 218 aa10.9□□□□□ -0.66
LRRC28-210ENST00000558879 POLR2KP53803 58 aaKnown RBP10.9□□□□□ -0.66
LRRC28-210ENST00000558879 RPL23P62829 140 aaKnown RBP10.9□□□□□ -0.66
LRRC28-210ENST00000558879 FAM74A3Q4VXF1 159 aa10.9□□□□□ -0.66
LRRC28-210ENST00000558879 AMMECR1LQ6DCA0 310 aa10.9□□□□□ -0.66
LRRC28-210ENST00000558879 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
LRRC28-210ENST00000558879 TRBV27A0A0K0K1C4 114 aa10.89□□□□□ -0.67
LRRC28-210ENST00000558879 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
LRRC28-210ENST00000558879 C9JQL5 133 aa10.89□□□□□ -0.67
LRRC28-210ENST00000558879 PMCHP20382 165 aa10.89□□□□□ -0.67
LRRC28-210ENST00000558879 RNASEKQ6P5S7 137 aaKnown RBP10.89□□□□□ -0.67
LRRC28-210ENST00000558879 AMN1Q8IY45 258 aa10.89□□□□□ -0.67
LRRC28-210ENST00000558879 NUP35Q8NFH5 326 aa10.89□□□□□ -0.67
LRRC28-210ENST00000558879 ST20Q9HBF5 79 aa10.89□□□□□ -0.67
LRRC28-210ENST00000558879 OR5A1Q8NGJ0 315 aa10.88□□□□□ -0.67
LRRC28-210ENST00000558879 TMEM242Q9NWH2 141 aa10.88□□□□□ -0.67
LRRC28-210ENST00000558879 IGHV3-64A0A075B6Q5 118 aa10.87□□□□□ -0.67
LRRC28-210ENST00000558879 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
LRRC28-210ENST00000558879 SRSF3P84103 164 aaKnown RBP10.87□□□□□ -0.67
LRRC28-210ENST00000558879 RIGQ13278 110 aa10.87□□□□□ -0.67
LRRC28-210ENST00000558879 TMEM241Q24JQ0 296 aa10.87□□□□□ -0.67
LRRC28-210ENST00000558879 MRPL52Q86TS9 123 aaKnown RBP10.87□□□□□ -0.67
LRRC28-210ENST00000558879 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
LRRC28-210ENST00000558879 AP5S1Q9NUS5 200 aa10.87□□□□□ -0.67
LRRC28-210ENST00000558879 NAT8Q9UHE5 227 aa10.87□□□□□ -0.67
LRRC28-210ENST00000558879 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-210ENST00000558879 FOXI1Q12951 378 aa10.86□□□□□ -0.67
LRRC28-210ENST00000558879 NRACQ8N912 160 aa10.86□□□□□ -0.67
LRRC28-210ENST00000558879 NAT8BQ9UHF3 227 aa10.86□□□□□ -0.67
LRRC28-210ENST00000558879 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
LRRC28-210ENST00000558879 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
LRRC28-210ENST00000558879 RPL37AP61513 92 aaKnown RBP10.85□□□□□ -0.67
LRRC28-210ENST00000558879 ADIRFQ15847 76 aa10.85□□□□□ -0.67
LRRC28-210ENST00000558879 SMDT1Q9H4I9 107 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms